Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 1.1e-159 566.6 294 100.0
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 6.3e-139 497.7 294 87.8
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 1.1e-138 496.9 294 87.8
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 3.8e-136 488.4 288 85.8
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 5.9e-129 464.5 289 80.3
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 8.5e-128 460.7 280 81.8
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 4.4e-124 448.4 283 78.1
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 1.3e-123 446.8 289 78.2
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 3.1e-122 442.2 282 77.7
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 2.9e-120 435.6 284 77.5
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 8.5e-120 434.1 283 75.6
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 1.4e-114 416.8 282 74.1
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 1.6e-113 413.3 282 71.6
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 5.9e-113 411.4 282 72.0
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 7.7e-113 411.0 283 73.1
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 1.3e-112 410.2 282 72.0
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 2.9e-112 409.1 283 72.8
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 1.1e-111 407.1 284 71.8
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 1.5e-111 406.8 282 72.0
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 1.9e-111 406.4 282 72.0
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 7.2e-111 404.4 282 72.3
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 9.4e-111 404.1 282 70.2
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 1.6e-110 403.3 282 72.7
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 3.6e-110 402.1 282 71.6
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 4.7e-110 401.7 282 70.2
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 1.4e-109 400.2 282 71.3
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 1.8e-109 399.8 282 70.2
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 1.8e-109 399.8 285 69.5
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 4.0e-109 398.7 282 69.5
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 5.2e-109 398.3 282 70.6
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 6.8e-109 397.9 282 68.8
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 8.8e-109 397.5 282 70.2
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 1.2e-108 397.1 282 70.9
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 2.6e-108 396.0 282 69.1
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 5.7e-108 394.8 280 70.7
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 5.7e-108 394.8 282 69.9
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 7.5e-108 394.4 280 70.4
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 9.8e-108 394.0 280 71.1
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 9.8e-108 394.0 282 68.1
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 9.8e-108 394.0 282 69.5
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 2.2e-107 392.9 282 70.2
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 2.8e-107 392.5 282 71.3
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 3.7e-107 392.1 281 69.0
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 6.3e-107 391.3 285 68.8
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 1.4e-106 390.2 282 68.1
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 1.4e-106 390.2 282 68.8
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 2.7e-105 386.0 284 67.3
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 2.7e-105 386.0 283 66.8
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 2.7e-105 386.0 282 68.1
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 3.5e-105 385.6 282 67.4
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 7.7e-105 384.4 282 67.7
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.7e-104 383.3 282 67.7
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 2.3e-104 382.9 284 65.8
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 2.3e-104 382.9 282 67.0
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 3.8e-104 382.1 284 64.8
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 3.8e-104 382.1 284 66.9
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 8.6e-104 380.9 284 66.2
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 1.1e-103 380.6 284 66.2
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 1.1e-103 380.6 282 66.7
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.5e-103 380.2 282 66.7
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 1.9e-103 379.8 284 66.2
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 1.9e-103 379.8 284 66.2
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 1.9e-103 379.8 284 66.2
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 5.6e-103 378.3 282 68.8
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 9.5e-103 377.5 283 65.7
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 9.5e-103 377.5 284 65.5
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 1.2e-102 377.1 284 65.1
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 1.2e-102 377.1 282 66.7
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 1.8e-101 373.2 284 64.4
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 3.0e-101 372.5 285 67.4
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 8.9e-101 370.9 283 65.0
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 3.7e-99 365.5 285 65.6
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 4.9e-99 365.2 282 66.0
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 2.4e-98 362.8 279 65.2
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 2.4e-98 362.8 282 65.6
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 1.6e-97 360.1 316 59.5
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 3.5e-97 359.0 249 71.5
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 5.9e-97 358.2 286 65.4
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.7e-96 356.7 264 67.0
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.7e-96 356.7 249 69.9
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 3.9e-96 355.5 279 64.9
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 6.6e-96 354.8 285 63.2
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 2.8e-94 349.4 279 62.7
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 4.4e-92 342.0 342 55.3
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 5.8e-92 341.7 249 67.5
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 1.3e-91 340.5 236 72.9
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.7e-91 340.1 285 59.6
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 2.2e-91 339.7 271 63.5
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 1.1e-90 337.4 420 47.1
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 3.2e-90 335.9 279 62.0
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 7.0e-90 334.7 295 57.3
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 2.7e-89 332.8 295 61.0
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 6.0e-89 331.6 283 58.3
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 3.9e-88 328.9 325 54.2
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 2.1e-86 323.2 221 72.9
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 6.8e-85 318.2 236 67.4
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 6.0e-81 305.1 282 53.2
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 3.9e-80 302.4 282 57.4
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 3.1e-77 292.7 282 51.8
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 2.6e-76 289.7 280 52.9
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.1e-74 284.3 196 69.9
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 3.2e-74 282.7 200 69.0
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 4.6e-65 252.3 236 58.1
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 1.3e-64 250.8 284 52.5
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 8.1e-54 214.9 142 74.6
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 4.9e-51 205.7 282 43.3
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 4.2e-50 202.6 156 62.8
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 1.0e-48 198.0 118 89.8
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 3.0e-48 196.4 323 39.6
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 4.9e-43 179.1 192 50.5
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 6.3e-38 162.2 95 88.4
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 2.4e-37 160.2 335 33.7
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 4.1e-37 159.5 185 50.3
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 5.9e-36 155.6 122 68.9
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 1.7e-35 154.1 173 49.7
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.9e-31 140.6 128 58.6
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 1.2e-25 121.3 167 41.9
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 8.8e-24 115.2 186 39.2
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 5.5e-18 95.9 91 54.9
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 5.7e-07 59.3 57 52.6
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 9.7e-07 58.5 57 50.9
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 1.7e-06 57.8 37 70.3


User provided reference genes

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