Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 5.6e-89 330.9 162 100.0
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 6.6e-82 307.4 157 94.9
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 1.4e-79 299.7 158 92.4
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.8e-79 299.3 156 91.0
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 1.2e-75 286.6 157 87.3
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 7.9e-75 283.9 157 87.9
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 1.3e-74 283.1 157 86.0
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 3.0e-74 282.0 158 86.7
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 7.4e-73 277.3 156 82.7
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 4.5e-70 268.1 154 83.8
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 5.5e-68 261.2 153 83.0
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.6e-56 223.0 152 69.1
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.4e-55 219.9 151 68.9
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 3.1e-55 218.8 161 66.5
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 1.5e-54 216.5 156 65.4
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 3.4e-54 215.3 152 66.4
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 3.4e-54 215.3 152 64.5
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 5.9e-54 214.5 152 65.1
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 1.0e-53 213.8 163 65.0
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 1.7e-53 213.0 156 63.5
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.9e-53 212.2 164 65.2
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 8.4e-53 210.7 164 62.8
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.1e-52 210.3 147 67.3
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 1.4e-52 209.9 156 64.1
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.4e-52 209.9 155 63.9
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 1.4e-52 209.9 151 67.5
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 1.9e-52 209.5 159 61.6
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.2e-52 208.8 164 64.6
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 4.2e-52 208.4 156 63.5
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 4.2e-52 208.4 154 64.3
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 5.5e-52 208.0 154 62.3
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 7.2e-52 207.6 164 62.8
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 9.3e-52 207.2 147 64.6
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 9.3e-52 207.2 156 63.5
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 9.3e-52 207.2 156 63.5
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 9.3e-52 207.2 159 61.0
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 1.2e-51 206.8 156 63.5
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 2.1e-51 206.1 156 62.2
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.1e-51 206.1 164 64.0
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 2.1e-51 206.1 156 64.7
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 3.5e-51 205.3 152 65.8
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 6.1e-51 204.5 154 62.3
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 7.9e-51 204.1 156 62.2
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 2.3e-50 202.6 155 63.9
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 6.7e-50 201.1 153 62.1
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 8.7e-50 200.7 153 61.4
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.1e-49 200.3 164 61.0
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 1.5e-49 199.9 156 62.2
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.5e-49 199.9 147 62.6
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.9e-49 199.5 152 61.2
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 2.5e-49 199.1 167 58.1
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 2.5e-49 199.1 156 61.5
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.5e-49 199.1 157 59.9
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 4.3e-49 198.4 156 58.3
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 4.3e-49 198.4 156 60.3
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 1.6e-48 196.4 147 62.6
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 2.2e-48 196.1 156 60.3
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 2.2e-48 196.1 162 60.5
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 3.7e-48 195.3 166 56.6
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 6.3e-48 194.5 152 59.2
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 8.2e-48 194.1 152 60.5
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 8.2e-48 194.1 152 60.5
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.1e-47 193.7 155 62.6
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 1.1e-47 193.7 152 63.2
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.1e-47 193.7 161 58.4
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 1.4e-47 193.4 151 62.3
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.4e-47 193.4 151 62.3
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.4e-47 193.4 151 62.3
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.4e-47 193.4 153 62.7
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 2.4e-47 192.6 217 49.3
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 4.1e-47 191.8 148 60.8
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.3e-47 191.4 151 61.6
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.2e-46 190.3 156 63.5
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.2e-46 190.3 158 60.1
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 1.5e-46 189.9 151 59.6
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.5e-46 189.9 151 59.6
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 2.6e-46 189.1 164 59.1
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 2.6e-46 189.1 151 64.2
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.3e-45 186.8 147 59.2
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.3e-45 186.8 151 59.6
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 3.8e-45 185.3 164 56.7
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 5.0e-45 184.9 158 54.4
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 6.5e-45 184.5 149 60.4
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 2.5e-44 182.6 154 60.4
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 3.6e-43 178.7 157 56.7
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 4.6e-43 178.3 153 56.2
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 4.6e-43 178.3 189 51.9
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.0e-42 177.2 153 56.2
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.4e-42 176.8 151 57.6
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 2.5e-41 172.6 121 66.1
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 2.6e-38 162.5 157 51.0
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.4e-38 162.2 125 64.0
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 7.9e-35 151.0 105 65.7
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 1.1e-33 147.1 147 50.3
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 1.5e-33 146.7 124 58.1
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.8e-32 142.5 131 56.5
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 1.1e-31 140.6 157 52.2
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.3e-31 138.3 120 56.7
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 9.1e-31 137.5 146 52.7
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 4.5e-30 135.2 108 58.3
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.5e-28 130.2 108 62.0
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.5e-28 130.2 156 46.2
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.2e-27 127.1 148 48.6
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 4.7e-27 125.2 124 50.8
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.0e-26 124.0 135 46.7
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 1.0e-26 124.0 147 46.3
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.0e-26 122.5 101 58.4
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 4.0e-26 122.1 99 61.6
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 9.1e-23 110.9 132 41.7
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 2.9e-21 105.9 134 41.8
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 8.5e-21 104.4 97 50.5
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.1e-12 77.4 106 47.2
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 2.1e-11 73.2 49 65.3
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 8.0e-11 71.2 107 32.7
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.0e-10 70.9 46 67.4
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.3e-10 69.7 45 64.4
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.7e-08 63.5 44 59.1


User provided reference genes

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