Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 2.1e-241 838.6 417 100.0
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 1.7e-198 696.0 410 86.1
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 2.9e-198 695.3 408 85.5
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 8.2e-185 650.6 405 80.7
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 1.2e-183 646.7 392 82.9
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 1.2e-183 646.7 405 80.0
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 2.6e-183 645.6 392 82.1
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 3.8e-182 641.7 406 80.3
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 6.1e-180 634.4 407 78.9
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 2.6e-178 629.0 367 86.6
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 7.0e-176 620.9 408 77.0
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 7.0e-176 620.9 408 77.0
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 3.1e-168 595.5 400 74.0
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 9.5e-165 583.9 397 73.3
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 6.3e-161 571.2 390 73.3
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 8.3e-161 570.9 390 71.8
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 5.4e-160 568.2 392 73.0
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 5.4e-160 568.2 390 72.1
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 1.6e-159 566.6 392 71.7
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 4.5e-159 565.1 390 71.0
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 4.5e-159 565.1 390 71.0
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 1.0e-158 563.9 388 72.4
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 2.3e-158 562.8 397 71.5
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 1.1e-157 560.5 411 69.1
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 1.9e-157 559.7 390 70.8
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 7.3e-157 557.8 404 69.8
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 1.2e-156 557.0 407 67.3
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 1.6e-156 556.6 405 67.9
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 2.1e-156 556.2 390 70.3
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 2.1e-156 556.2 395 69.4
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.8e-156 555.8 394 71.1
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.8e-155 553.1 395 69.6
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.0e-155 552.4 395 69.6
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 4.0e-155 552.0 424 67.5
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 5.2e-155 551.6 397 68.3
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 5.2e-155 551.6 392 69.9
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 8.9e-155 550.8 404 65.6
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 8.9e-155 550.8 390 69.7
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.0e-154 549.7 403 68.7
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.7e-154 548.1 403 68.2
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 1.3e-153 547.0 390 69.5
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 8.3e-153 544.3 449 64.1
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 1.1e-152 543.9 419 65.6
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 4.1e-152 542.0 390 68.5
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 9.2e-152 540.8 390 68.2
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 2.0e-151 539.7 392 67.6
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 5.9e-151 538.1 392 67.3
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 7.8e-151 537.7 384 68.8
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 3.0e-150 535.8 390 67.9
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 6.6e-150 534.6 390 68.7
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 6.6e-150 534.6 390 67.9
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 1.1e-149 533.9 401 66.1
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 1.5e-149 533.5 384 68.0
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 2.5e-149 532.7 387 67.2
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 3.3e-149 532.3 402 65.2
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 3.3e-149 532.3 402 65.2
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 3.3e-149 532.3 390 68.7
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 7.3e-149 531.2 403 65.3
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 7.3e-149 531.2 403 65.3
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 9.5e-149 530.8 416 65.4
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 9.5e-149 530.8 390 68.5
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 1.6e-148 530.0 406 65.8
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 2.8e-148 529.3 402 64.7
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 1.8e-147 526.6 407 63.6
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 3.1e-147 525.8 392 65.3
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 4.0e-147 525.4 409 64.1
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 5.2e-147 525.0 369 69.1
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 6.8e-147 524.6 403 64.5
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 4.4e-146 521.9 393 66.7
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 9.8e-146 520.8 369 69.1
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 1.7e-145 520.0 404 65.1
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 6.4e-145 518.1 393 63.6
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 1.4e-144 516.9 392 64.5
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 5.4e-144 515.0 391 66.0
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 5.4e-144 515.0 397 64.0
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 1.6e-143 513.5 390 63.6
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 2.0e-143 513.1 392 64.5
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 2.7e-143 512.7 418 63.4
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 1.0e-142 510.8 403 63.5
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 3.9e-142 508.8 390 64.9
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 1.9e-141 506.5 451 58.8
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 1.1e-139 500.7 393 61.3
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 2.3e-139 499.6 405 61.7
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 8.9e-139 497.7 369 66.4
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 3.4e-138 495.7 391 62.4
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 1.7e-137 493.4 405 61.0
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 1.7e-134 483.4 405 61.2
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 2.3e-134 483.0 406 57.9
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 8.6e-134 481.1 474 53.8
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 8.9e-131 471.1 386 63.5
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 5.2e-123 445.3 390 61.3
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 4.9e-121 438.7 390 57.7
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 5.6e-117 425.2 342 63.5
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 1.3e-113 414.1 378 56.3
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 1.1e-112 411.0 407 55.3
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 1.6e-111 407.1 393 56.2
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 3.1e-107 392.9 389 51.4
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 2.0e-106 390.2 316 63.9
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 1.7e-105 387.1 397 53.7
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 3.8e-105 386.0 393 49.9
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 9.3e-104 381.3 295 63.4
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 4.8e-100 369.0 394 52.0
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 1.0e-97 361.3 289 62.6
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 1.1e-96 357.8 386 49.5
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 1.1e-93 347.8 214 79.4
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 5.7e-93 345.5 356 50.6
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 5.9e-82 308.9 183 80.3
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 2.3e-78 297.0 402 42.0
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 1.3e-76 291.2 407 41.0
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 1.1e-72 278.1 239 56.5
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 1.2e-53 214.9 116 92.2
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 6.1e-47 192.6 134 72.4
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 1.3e-41 174.9 146 59.6
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 3.6e-39 166.8 133 62.4
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 3.0e-38 163.7 142 60.6
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 2.6e-37 160.6 107 71.0
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 9.2e-27 125.6 385 28.8
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 9.5e-24 115.5 361 27.1
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 1.2e-23 115.2 79 67.1
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.1e-22 112.1 109 52.3
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.2e-19 100.5 83 60.2
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 2.7e-18 97.4 64 67.2
Rhsim05G0138400 Rhododendron simsii HOM05D005191 ORTHO05D006725 9.5e-16 89.0 115 50.4
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.1e-15 87.8 109 45.9
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.1e-14 85.5 113 44.2
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 7.6e-13 79.3 52 69.2
Rhsim10G0150400 Rhododendron simsii HOM05D005191 ORTHO05D030537 2.2e-12 77.8 51 70.6
COL.COLO4_23752 Corchorus olitorius HOM05D005191 ORTHO05D016248 4.9e-12 76.6 61 62.3
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 6.4e-12 76.3 62 59.7
GSVIVG01012804001 Vitis vinifera HOM05D005191 ORTHO05D006725 2.4e-11 74.3 46 73.9
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 1.6e-10 71.6 56 64.3
Thhalv10022959m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 3.5e-10 70.5 96 43.8
arahy.Tifrunner.gnm1.ann1.GZYG19 Arachis hypogaea HOM05D000607 ORTHO05D000518 6.9e-06 56.2 38 68.4


User provided reference genes

Program Settings