Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.9e-146 520.8 249 100.0
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.9e-146 520.8 249 100.0
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 2.5e-120 435.6 252 82.5
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 1.2e-117 426.8 249 82.7
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 9.8e-117 423.7 246 84.6
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 8.3e-116 420.6 248 83.5
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 3.5e-114 415.2 251 79.3
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 5.9e-114 414.5 249 79.9
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 6.1e-111 404.4 253 78.3
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 8.3e-108 394.0 248 76.2
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 8.6e-105 384.0 252 72.6
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 2.5e-104 382.5 255 74.5
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 3.7e-100 368.6 249 70.7
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 3.7e-100 368.6 256 71.5
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 4.9e-100 368.2 248 74.2
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 8.3e-100 367.5 248 71.0
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.4e-99 364.8 250 70.0
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 3.5e-98 362.1 250 69.2
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.5e-98 362.1 250 69.2
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 4.6e-98 361.7 246 69.9
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 3.0e-97 359.0 251 69.3
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 3.9e-97 358.6 251 69.3
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 3.9e-97 358.6 257 70.0
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.5e-96 356.7 250 70.0
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.9e-96 356.3 250 68.4
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.3e-96 355.1 255 69.8
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 1.6e-95 353.2 255 69.4
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 4.7e-95 351.7 249 67.9
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 6.2e-95 351.3 201 79.6
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.1e-94 350.5 255 69.0
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 1.8e-94 349.7 247 68.8
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 2.3e-94 349.4 252 67.5
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 1.2e-93 347.1 250 66.8
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 5.8e-93 344.7 259 65.6
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 7.5e-93 344.4 251 67.7
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 1.3e-92 343.6 249 67.9
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.7e-92 343.2 259 66.4
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 1.7e-92 343.2 188 83.5
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 2.9e-92 342.4 253 68.0
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 8.3e-92 340.9 254 67.3
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 8.3e-92 340.9 262 65.3
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 1.4e-91 340.1 251 67.3
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 1.9e-91 339.7 255 67.5
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.6e-90 336.7 256 66.4
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 2.0e-90 336.3 202 76.7
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 3.5e-90 335.5 245 65.3
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 4.6e-90 335.1 248 66.5
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 4.6e-90 335.1 246 67.1
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.0e-90 334.7 251 66.9
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 6.0e-90 334.7 244 65.2
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 6.0e-90 334.7 263 65.4
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 7.8e-90 334.3 250 66.0
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 3.0e-89 332.4 227 69.6
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 3.0e-89 332.4 204 74.5
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 6.6e-89 331.3 228 69.3
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.9e-88 329.7 202 75.2
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 1.9e-88 329.7 202 75.2
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 3.3e-88 328.9 242 66.9
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 4.3e-88 328.6 248 64.5
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 9.5e-88 327.4 246 65.0
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.2e-87 327.0 250 64.4
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 1.2e-87 327.0 205 73.7
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 2.8e-87 325.9 198 75.3
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 2.8e-87 325.9 248 63.7
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 3.6e-87 325.5 203 72.4
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 3.6e-87 325.5 199 74.4
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 4.7e-87 325.1 239 68.6
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 6.2e-87 324.7 263 62.4
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 1.1e-86 323.9 203 72.9
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 1.8e-86 323.2 211 70.6
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.8e-86 323.2 246 65.0
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 2.3e-86 322.8 195 74.9
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 4.0e-86 322.0 196 74.0
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 5.8e-85 318.2 188 77.7
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 7.5e-85 317.8 241 64.7
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 2.2e-84 316.2 247 64.0
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 2.2e-84 316.2 201 71.1
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 1.1e-83 313.9 207 70.0
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 3.2e-83 312.4 236 65.3
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 1.2e-82 310.5 261 60.9
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 1.6e-82 310.1 258 61.2
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 2.1e-82 309.7 257 59.1
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 2.7e-82 309.3 203 70.0
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 2.7e-82 309.3 270 61.1
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 4.6e-82 308.5 211 69.2
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 7.8e-82 307.8 253 61.7
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 2.3e-81 306.2 233 63.9
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 6.6e-81 304.7 186 75.8
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 1.1e-80 303.9 250 58.8
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.5e-80 303.5 217 66.8
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 1.6e-79 300.1 176 79.5
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 2.6e-77 292.7 197 71.1
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 7.6e-77 291.2 180 73.3
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 9.9e-77 290.8 170 77.1
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 2.9e-76 289.3 169 76.9
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 7.8e-74 281.2 258 56.6
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.1e-72 277.3 170 75.9
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 5.4e-67 258.5 239 54.4
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.0e-62 242.3 180 66.7
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 5.3e-62 241.9 239 55.2
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.1e-59 234.2 138 77.5
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 4.3e-56 222.2 174 57.5
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 2.8e-55 219.5 203 53.2
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 2.4e-54 216.5 206 51.0
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 3.8e-36 156.0 166 53.0
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 3.2e-35 152.9 181 43.6
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.1e-24 117.9 75 73.3
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 3.3e-24 116.3 64 76.6
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 1.3e-23 114.4 244 32.0
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 4.1e-22 109.4 60 76.7
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 6.5e-20 102.1 169 36.1
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.9e-19 100.5 80 61.2
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 1.8e-09 67.4 61 45.9


User provided reference genes

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