Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 2.7e-272 941.4 485 100.0
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 1.8e-228 795.8 494 85.0
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.1e-220 770.0 494 83.2
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 4.7e-200 701.4 505 75.2
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 3.4e-198 695.3 502 74.9
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 7.5e-198 694.1 503 74.6
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 4.6e-195 684.9 504 73.4
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 8.6e-194 680.6 512 72.5
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 8.4e-189 664.1 487 73.7
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 5.8e-182 641.3 515 67.2
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.7e-181 639.8 515 68.2
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 1.1e-177 627.1 506 67.2
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 5.3e-175 618.2 496 68.1
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 2.0e-174 616.3 492 67.5
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 5.8e-174 614.8 489 67.9
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 7.6e-174 614.4 538 63.4
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 2.2e-173 612.8 518 65.8
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 2.9e-173 612.5 492 67.1
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 3.8e-173 612.1 492 67.5
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 6.4e-173 611.3 511 66.3
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 8.4e-173 610.9 525 66.5
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 3.2e-172 609.0 498 66.1
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 1.0e-170 604.0 502 66.3
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 1.0e-170 604.0 511 65.9
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.3e-170 603.6 495 67.3
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.3e-169 598.6 493 66.5
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 1.6e-168 596.7 496 65.9
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.8e-168 595.9 529 64.5
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 2.6e-166 589.3 519 63.8
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 9.9e-166 587.4 493 66.3
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 4.9e-165 585.1 503 65.6
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 8.4e-165 584.3 493 66.1
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.4e-164 583.6 492 65.9
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 2.1e-163 579.7 496 64.3
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 2.7e-163 579.3 484 64.0
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 6.7e-162 574.7 503 65.0
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 8.7e-162 574.3 525 62.5
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.5e-161 573.5 517 62.1
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.1e-159 567.4 535 60.4
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 3.1e-159 565.8 391 81.3
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 3.8e-157 558.9 499 61.9
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.4e-156 557.0 477 64.4
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.9e-156 556.6 506 62.3
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 6.0e-155 551.6 489 63.4
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.8e-154 550.1 516 62.0
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 8.7e-154 547.7 479 63.9
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 2.4e-151 539.7 469 64.0
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 3.8e-149 532.3 478 62.3
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 3.2e-148 529.3 479 61.6
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 5.5e-148 528.5 490 59.4
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 3.3e-145 519.2 498 60.4
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 4.8e-144 515.4 488 60.5
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.4e-143 513.8 511 60.3
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.4e-143 513.1 494 60.1
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 5.3e-143 511.9 509 59.1
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 1.2e-142 510.8 508 57.7
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 2.0e-142 510.0 490 59.4
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 1.1e-140 504.2 495 59.4
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 3.0e-138 496.1 511 58.1
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 3.3e-137 492.7 519 56.3
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 4.8e-136 488.8 482 57.3
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 6.3e-136 488.4 521 56.2
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 8.2e-136 488.0 498 58.4
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 2.6e-134 483.0 575 52.3
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 7.7e-134 481.5 469 57.8
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 2.2e-133 479.9 492 57.9
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 1.4e-132 477.2 485 58.8
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 2.3e-130 469.9 500 55.2
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 2.3e-130 469.9 500 55.2
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 2.3e-130 469.9 464 58.6
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.5e-129 467.2 472 57.0
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 2.6e-129 466.5 499 53.3
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.2e-123 447.6 488 53.1
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 1.3e-120 437.6 492 54.5
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.3e-120 437.6 431 57.8
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.0e-117 427.9 519 50.7
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 3.2e-116 422.9 492 52.8
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 3.2e-116 422.9 503 52.7
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.6e-115 420.6 517 49.5
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.0e-114 417.9 509 50.7
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 4.0e-114 416.0 478 54.4
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 2.6e-113 413.3 489 53.8
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 2.4e-111 406.8 469 52.2
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 7.0e-111 405.2 492 51.4
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 3.8e-109 399.4 467 51.8
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 3.3e-108 396.4 500 51.8
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 5.5e-108 395.6 420 55.7
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 5.5e-108 395.6 470 49.1
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 3.6e-107 392.9 480 50.6
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 1.8e-106 390.6 441 53.7
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 1.5e-105 387.5 472 50.4
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 3.0e-93 346.7 347 59.9
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 3.1e-90 336.7 490 45.9
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 6.0e-86 322.4 477 42.6
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.7e-85 320.9 495 44.6
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 2.6e-81 307.0 484 42.8
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 8.3e-80 302.0 518 41.3
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.5e-78 296.6 552 37.9
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 7.8e-78 295.4 322 53.7
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 5.1e-77 292.7 543 38.7
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 3.3e-76 290.0 504 40.1
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.4e-73 280.0 304 54.3
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.7e-69 267.7 222 63.1
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 4.9e-64 249.6 396 40.7
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.1e-60 238.4 220 59.5
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 3.3e-60 236.9 296 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.7e-56 224.6 514 34.4
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 8.7e-53 212.2 366 41.5
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 6.4e-48 196.1 599 30.2
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.6e-38 164.9 523 28.5
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 7.4e-36 156.0 358 35.5
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 5.3e-34 149.8 153 54.2
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 8.8e-29 132.5 84 71.4
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 2.6e-12 77.8 57 64.9
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 4.4e-12 77.0 66 66.7
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 1.0e-08 65.9 159 34.6
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 2.2e-08 64.7 52 59.6
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.9e-08 64.3 291 27.5


User provided reference genes

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