Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21613_v3 Cicer arietinum L. HOM05D001431 ORTHO05D001268 9.4e-62 240.0 117 100.0
Psat4g033120 Pisum sativum HOM05D001431 ORTHO05D001268 4.8e-42 174.5 138 65.2
Medtr4g116530 Medicago truncatula HOM05D001431 ORTHO05D001268 3.1e-41 171.8 140 64.3
TPR.G15780 Trifolium pratense HOM05D001431 ORTHO05D001268 1.5e-38 162.9 139 64.0
arahy.Tifrunner.gnm1.ann1.KMWM4V Arachis hypogaea HOM05D001431 ORTHO05D001268 1.3e-31 139.8 139 55.4
Lalb_Chr07g0179511 Lupinus albus HOM05D001431 ORTHO05D001268 8.9e-28 127.1 138 55.1
Glyma.13G157400 Glycine max HOM05D001431 ORTHO05D001268 1.3e-26 123.2 141 53.2
Glyma.17G105000 Glycine max HOM05D001431 ORTHO05D001268 4.9e-26 121.3 141 53.2
Lj6g0025598 Lotus japonicus HOM05D001431 ORTHO05D001268 1.9e-25 119.4 139 49.6
Ca_27061_v3 Cicer arietinum L. HOM05D001431 ORTHO05D001268 4.6e-24 114.8 139 51.8
Glyma.09G095800 Glycine max HOM05D001431 ORTHO05D001268 3.3e-22 108.6 141 48.2
Glyma.15G202100 Glycine max HOM05D001431 ORTHO05D001268 7.3e-22 107.5 139 48.2
Medtr2g461190 Medicago truncatula HOM05D001431 ORTHO05D001268 1.2e-21 106.7 139 48.9
Psat0ss25082g0080 Pisum sativum HOM05D001431 ORTHO05D001268 1.2e-21 106.7 139 48.2
TPR.G22802 Trifolium pratense HOM05D001431 ORTHO05D001268 6.2e-21 104.4 138 48.6
VMungo1215G3003 Vigna mungo HOM05D001431 ORTHO05D001268 1.2e-19 100.1 141 49.6
Phvul.009G209600 Phaseolus vulgaris HOM05D001431 ORTHO05D001268 1.3e-18 96.7 138 44.2
Phvul.003G174800 Phaseolus vulgaris HOM05D001431 ORTHO05D001268 5.4e-17 91.3 142 47.2
VMungo1309G2763 Vigna mungo HOM05D001431 ORTHO05D001268 5.4e-17 91.3 138 43.5
Lalb_Chr11g0072871 Lupinus albus HOM05D001431 ORTHO05D001268 3.5e-16 88.6 139 37.4
Manes.14G138600 Manihot esculenta HOM05D001431 ORTHO05D001268 9.5e-14 80.5 127 38.6
CsaV3_1G028510 Cucumis sativus L. HOM05D001431 ORTHO05D001268 2.3e-12 75.9 133 33.8
MELO3C010262.2 Cucumis melo HOM05D001431 ORTHO05D001268 3.1e-12 75.5 124 36.3
TAR626G1912 Trochodendron aralioides HOM05D001431 ORTHO05D001268 4.0e-12 75.1 113 38.9
ClCG06G012050 Citrullus lanatus HOM05D001431 ORTHO05D001268 2.0e-11 72.8 133 33.1
CiPaw.15G181700 Carya illinoinensis HOM05D001431 ORTHO05D001268 5.8e-11 71.2 123 35.0
Lsat_1_v5_gn_7_47921 Lactuca sativa HOM05D001431 ORTHO05D001268 2.2e-10 69.3 131 34.4
Oeu042713.1 Olea europaea HOM05D001431 ORTHO05D001268 2.9e-10 68.9 112 37.5
Sabra18G0097100 Salix brachista HOM05D001431 ORTHO05D001268 6.4e-10 67.8 116 40.5
Potri.018G114200 Populus trichocarpa HOM05D001431 ORTHO05D001268 1.1e-09 67.0 123 37.4
TWI34G1362 Tripterygium wilfordii HOM05D001431 ORTHO05D001268 1.1e-09 67.0 140 32.9
COL.COLO4_18913 Corchorus olitorius HOM05D001431 ORTHO05D001268 1.9e-09 66.2 129 34.1
Haze_19319 Corylus avellana HOM05D001431 ORTHO05D001268 2.4e-09 65.9 125 36.8
HanXRQChr05g0137941 Helianthus annuus HOM05D001431 ORTHO05D001268 2.4e-09 65.9 136 32.4
Hma1.2p1_1784F.1_g302160 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 3.2e-09 65.5 85 41.2
QL02p091314 Quercus lobata HOM05D001431 ORTHO05D001268 5.4e-09 64.7 96 38.5
Duzib187G1968 Durio zibethinus HOM05D001431 ORTHO05D001268 7.1e-09 64.3 135 35.6
Hma1.2p1_0949F.1_g240600 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 9.2e-09 63.9 85 40.0
Potri.006G190100 Populus trichocarpa HOM05D001431 ORTHO05D001268 9.2e-09 63.9 73 46.6
Cfa020891 Carpinus fangiana HOM05D001431 ORTHO05D001268 1.2e-08 63.5 96 39.6
Eucgr.C02729 Eucalyptus grandis HOM05D001431 ORTHO05D001268 1.2e-08 63.5 78 44.9
Rhsim03G0254500 Rhododendron simsii HOM05D001431 ORTHO05D001268 2.1e-08 62.8 134 32.1
HanXRQChr03g0064021 Helianthus annuus HOM05D001431 ORTHO05D001268 2.7e-08 62.4 100 36.0
QL02p091271 Quercus lobata HOM05D001431 ORTHO05D001268 2.7e-08 62.4 141 32.6
Cc06_g07420 Coffea canephora HOM05D001431 ORTHO05D001268 3.5e-08 62.0 100 40.0
Lsat_1_v5_gn_8_63180 Lactuca sativa HOM05D001431 ORTHO05D001268 3.5e-08 62.0 146 29.5
COL.COLO4_24101 Corchorus olitorius HOM05D001431 ORTHO05D001268 4.6e-08 61.6 93 40.9
CSS0009490 Camellia sinensis var. sinensis HOM05D001431 ORTHO05D001268 6.0e-08 61.2 81 37.0
Ciclev10010491m.g Citrus clementina HOM05D001431 ORTHO05D001268 6.0e-08 61.2 82 48.8
Nn8g39717 Nelumbo nucifera HOM05D001431 ORTHO05D001268 6.0e-08 61.2 97 34.0
Cpa.g.sc187.26 Carica papaya HOM05D001431 ORTHO05D001268 7.8e-08 60.8 105 36.2
Duzib168G0286 Durio zibethinus HOM05D001431 ORTHO05D001268 7.8e-08 60.8 80 38.8
Eucgr.C02728 Eucalyptus grandis HOM05D001431 ORTHO05D001268 7.8e-08 60.8 75 42.7
Hma1.2p1_0182F.1_g080500 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 7.8e-08 60.8 76 40.8
AUR62011255 Chenopodium quinoa HOM05D001431 ORTHO05D001268 1.0e-07 60.5 75 42.7
ECA240G3019 Erigeron canadensis HOM05D001431 ORTHO05D001268 1.0e-07 60.5 100 34.0
MSTRG.26316 Avicennia marina HOM05D001431 ORTHO05D001268 1.7e-07 59.7 115 34.8
Duzib168G0421 Durio zibethinus HOM05D001431 ORTHO05D001268 1.7e-07 59.7 107 35.5
Migut.K00377 Erythranthe guttata HOM05D001431 ORTHO05D001268 1.7e-07 59.7 113 34.5
Manes.16G126000 Manihot esculenta HOM05D001431 ORTHO05D001268 1.7e-07 59.7 139 34.5
Actinidia14101 Actinidia chinensis HOM05D001431 ORTHO05D001268 2.3e-07 59.3 82 40.2
Migut.K00665 Erythranthe guttata HOM05D001431 ORTHO05D001268 2.3e-07 59.3 108 32.4
Gohir.D06G102000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 2.3e-07 59.3 77 40.3
Manes.03G011900 Manihot esculenta HOM05D001431 ORTHO05D001268 2.3e-07 59.3 106 33.0
Eucgr.C00435 Eucalyptus grandis HOM05D001431 ORTHO05D001268 3.0e-07 58.9 83 38.6
AT5G25240 Arabidopsis thaliana HOM05D001431 ORTHO05D001268 3.9e-07 58.5 85 41.2
MSTRG.6092 Avicennia marina HOM05D001431 ORTHO05D001268 3.9e-07 58.5 118 31.4
Potri.006G259300 Populus trichocarpa HOM05D001431 ORTHO05D001268 3.9e-07 58.5 114 33.3
Migut.K00653 Erythranthe guttata HOM05D001431 ORTHO05D001268 5.1e-07 58.2 108 32.4
Gohir.A06G099800 Gossypium hirsutum HOM05D001431 ORTHO05D001268 5.1e-07 58.2 77 40.3
Gorai.010G117000 Gossypium raimondii HOM05D001431 ORTHO05D001268 5.1e-07 58.2 77 39.0
HanXRQChr06g0181721 Helianthus annuus HOM05D001431 ORTHO05D001268 5.1e-07 58.2 118 32.2
Thecc.09G141800 Theobroma cacao HOM05D001431 ORTHO05D001268 5.1e-07 58.2 83 41.0
BcaNung06283 Brassica carinata HOM05D001431 ORTHO05D001268 8.6e-07 57.4 81 42.0
Peaxi162Scf00391g00002 Petunia axillaris HOM05D001431 ORTHO05D001268 8.6e-07 57.4 103 35.0
Sabra06G0202700 Salix brachista HOM05D001431 ORTHO05D001268 8.6e-07 57.4 96 39.6
C09p06900 Brassica napus HOM05D001431 ORTHO05D001268 1.1e-06 57.0 81 42.0
BolC9t53610H Brassica oleracea HOM05D001431 ORTHO05D001268 1.1e-06 57.0 81 42.0
A09p06250 Brassica napus HOM05D001431 ORTHO05D001268 1.5e-06 56.6 81 42.0
BraA09t36269Z Brassica rapa HOM05D001431 ORTHO05D001268 1.5e-06 56.6 81 42.0
TAR383G0017 Trochodendron aralioides HOM05D001431 ORTHO05D001268 1.5e-06 56.6 102 35.3
ECA236G0145 Erigeron canadensis HOM05D001431 ORTHO05D001268 2.5e-06 55.8 81 38.3
Atru.chr7.261 Acer truncatum HOM05D001431 ORTHO05D001268 3.3e-06 55.5 101 34.7
AL6G36880 Arabidopsis lyrata HOM05D001431 ORTHO05D001268 3.3e-06 55.5 85 40.0
Duzib187G1758 Durio zibethinus HOM05D001431 ORTHO05D001268 3.3e-06 55.5 105 39.0
THA.LOC104814117 Tarenaya hassleriana HOM05D001431 ORTHO05D001268 3.3e-06 55.5 98 34.7
CARHR188250 Cardamine hirsuta HOM05D001431 ORTHO05D001268 4.3e-06 55.1 86 40.7
arahy.Tifrunner.gnm1.ann1.AE8MNQ Arachis hypogaea HOM05D001431 ORTHO05D001268 5.6e-06 54.7 101 34.7
BcaB04g19797 Brassica carinata HOM05D001431 ORTHO05D001268 5.6e-06 54.7 82 40.2
MD15G1130700 Malus domestica HOM05D001431 ORTHO05D001268 5.6e-06 54.7 72 40.3
PGSC0003DMG400030698 Solanum tuberosum HOM05D001431 ORTHO05D001268 5.6e-06 54.7 137 28.5
AUR62041452 Chenopodium quinoa HOM05D001431 ORTHO05D001268 7.3e-06 54.3 84 41.7
DCAR_020906 Daucus carota HOM05D001431 ORTHO05D001268 7.3e-06 54.3 106 33.0
Sed0026439 Sechium edule HOM05D001431 ORTHO05D001268 7.3e-06 54.3 118 33.9
Thhalv10005131m.g Eutrema salsugineum HOM05D001431 ORTHO05D001268 9.5e-06 53.9 79 41.8


User provided reference genes

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