Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21611_v3 Cicer arietinum L. HOM05D004574 ORTHO05D005612 0.0e+00 1167.9 649 100.0
Medtr4g116570 Medicago truncatula HOM05D004574 ORTHO05D005612 1.5e-249 866.3 689 74.9
TPR.G15786 Trifolium pratense HOM05D004574 ORTHO05D005612 2.3e-234 815.8 695 71.1
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 1.1e-217 760.4 690 65.7
Psat4g033240 Pisum sativum HOM05D004574 ORTHO05D005612 1.6e-211 740.0 573 74.9
Lj4g0023014 Lotus japonicus HOM05D004574 ORTHO05D005612 5.2e-210 734.9 699 64.4
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea HOM05D004574 ORTHO05D005612 6.8e-194 681.4 666 62.0
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 8.8e-194 681.0 594 67.0
arahy.Tifrunner.gnm1.ann1.YXSX85 Arachis hypogaea HOM05D004574 ORTHO05D005612 1.9e-188 663.3 681 59.9
Lalb_Chr07g0179541 Lupinus albus HOM05D004574 ORTHO05D005612 1.8e-183 646.7 692 58.2
VMungo1215G1939 Vigna mungo HOM05D004574 ORTHO05D005612 9.2e-183 644.4 693 57.6
Phvul.003G175300 Phaseolus vulgaris HOM05D004574 ORTHO05D005612 2.7e-182 642.9 693 57.0
Lalb_Chr12g0198521 Lupinus albus HOM05D004574 ORTHO05D005612 1.6e-171 607.1 684 57.7
CiPaw.16G117400 Carya illinoinensis HOM05D004574 ORTHO05D005612 6.0e-134 482.3 671 47.5
Haze_19313 Corylus avellana HOM05D004574 ORTHO05D005612 1.5e-132 477.6 665 48.7
Duzib168G1873 Durio zibethinus HOM05D004574 ORTHO05D005612 7.4e-132 475.3 666 47.7
Prupe.7G253700 Prunus persica HOM05D004574 ORTHO05D005612 4.8e-131 472.6 671 48.6
FvH4_1g01590 Fragaria vesca HOM05D004574 ORTHO05D005612 1.8e-130 470.7 650 49.1
Ciclev10007567m.g Citrus clementina HOM05D004574 ORTHO05D005612 3.1e-130 469.9 666 45.9
Gohir.A06G049000 Gossypium hirsutum HOM05D004574 ORTHO05D005612 3.4e-129 466.5 670 47.8
Gohir.D06G048700 Gossypium hirsutum HOM05D004574 ORTHO05D005612 7.6e-129 465.3 670 47.6
RcHm_v2.0_Chr2g0086551 Rosa chinensis HOM05D004574 ORTHO05D005612 2.2e-128 463.8 672 47.9
Manes.14G139500 Manihot esculenta HOM05D004574 ORTHO05D005612 4.9e-128 462.6 663 47.1
QL02p091406 Quercus lobata HOM05D004574 ORTHO05D005612 4.9e-128 462.6 656 47.4
Gorai.010G054900 Gossypium raimondii HOM05D004574 ORTHO05D005612 1.9e-127 460.7 679 47.0
Thecc.09G142400 Theobroma cacao HOM05D004574 ORTHO05D005612 3.2e-127 459.9 671 46.5
FAN26G2227 Fragaria x ananassa HOM05D004574 ORTHO05D005612 4.6e-126 456.1 651 47.9
Duzib187G1624 Durio zibethinus HOM05D004574 ORTHO05D005612 7.9e-126 455.3 663 46.5
Atru.chr7.229_Atru.chr7.228 Acer truncatum HOM05D004574 ORTHO05D005612 2.3e-125 453.8 682 44.6
FAN28G2389 Fragaria x ananassa HOM05D004574 ORTHO05D005612 1.1e-124 451.4 650 47.5
TWI34G0786 Tripterygium wilfordii HOM05D004574 ORTHO05D005612 4.3e-124 449.5 674 46.7
Cfa020884 Carpinus fangiana HOM05D004574 ORTHO05D005612 1.6e-123 447.6 667 47.2
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 8.2e-123 445.3 617 47.6
Potri.018G113600 Populus trichocarpa HOM05D004574 ORTHO05D005612 2.4e-122 443.7 670 44.3
FAN19G2203 Fragaria x ananassa HOM05D004574 ORTHO05D005612 3.1e-122 443.4 691 45.3
FAN23G1466 Fragaria x ananassa HOM05D004574 ORTHO05D005612 5.3e-122 442.6 647 47.4
MD15G1158500 Malus domestica HOM05D004574 ORTHO05D005612 2.0e-121 440.7 644 48.6
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 3.8e-120 436.4 664 47.4
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 1.1e-119 434.9 615 48.5
Sed0008757 Sechium edule HOM05D004574 ORTHO05D005612 3.9e-117 426.4 732 43.2
MELO3C010260.2 Cucumis melo HOM05D004574 ORTHO05D005612 2.4e-114 417.2 662 45.2
Cpa.g.sc46.91 Carica papaya HOM05D004574 ORTHO05D005612 6.9e-114 415.6 639 45.4
Sabra18G0096500 Salix brachista HOM05D004574 ORTHO05D005612 6.9e-114 415.6 663 42.4
Actinidia21909 Actinidia chinensis HOM05D004574 ORTHO05D005612 2.6e-113 413.7 622 45.3
ClCG06G012070 Citrullus lanatus HOM05D004574 ORTHO05D005612 4.5e-113 412.9 663 43.9
CsaV3_1G028540 Cucumis sativus L. HOM05D004574 ORTHO05D005612 1.9e-111 407.5 660 44.8
Sed0022583 Sechium edule HOM05D004574 ORTHO05D005612 2.0e-108 397.5 698 43.3
Sc18g0000060 Simmondsia chinensis HOM05D004574 ORTHO05D005612 1.1e-106 391.7 677 42.7
THA.LOC104815398 Tarenaya hassleriana HOM05D004574 ORTHO05D005612 1.1e-106 391.7 665 45.1
GSVIVG01012900001 Vitis vinifera HOM05D004574 ORTHO05D005612 4.1e-106 389.8 645 42.6
vmacro21880 Vaccinium macrocarpon HOM05D004574 ORTHO05D005612 5.3e-106 389.4 670 43.1
Potri.006G189501 Populus trichocarpa HOM05D004574 ORTHO05D005612 2.0e-105 387.5 668 41.5
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 5.0e-104 382.9 659 41.0
AT3G09850 Arabidopsis thaliana HOM05D004574 ORTHO05D005612 2.5e-103 380.6 643 43.9
AL3G21080 Arabidopsis lyrata HOM05D004574 ORTHO05D005612 8.8e-101 372.1 637 44.0
MSTRG.19628 Avicennia marina HOM05D004574 ORTHO05D005612 2.0e-100 370.9 611 42.6
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 5.7e-100 369.4 628 42.8
CARHR084360 Cardamine hirsuta HOM05D004574 ORTHO05D005612 1.3e-99 368.2 643 43.1
BolC5t34479H Brassica oleracea HOM05D004574 ORTHO05D005612 2.8e-99 367.1 625 46.2
DCAR_017762 Daucus carota HOM05D004574 ORTHO05D005612 4.8e-99 366.3 576 46.0
PGR102G2914 Punica granatum HOM05D004574 ORTHO05D005612 1.1e-98 365.2 627 41.6
Migut.J01279 Erythranthe guttata HOM05D004574 ORTHO05D005612 1.4e-98 364.8 635 42.0
Thhalv10020109m.g Eutrema salsugineum HOM05D004574 ORTHO05D005612 7.0e-98 362.5 651 43.3
Hund14397 Selenicereus undatus HOM05D004574 ORTHO05D005612 3.5e-97 360.1 747 38.2
BcaC05g29496 Brassica carinata HOM05D004574 ORTHO05D005612 4.5e-97 359.8 628 45.9
C05p58250 Brassica napus HOM05D004574 ORTHO05D005612 4.5e-97 359.8 628 45.9
Carub.0003s0894 Capsella rubella HOM05D004574 ORTHO05D005612 1.7e-96 357.8 646 43.2
HanXRQChr05g0139651 Helianthus annuus HOM05D004574 ORTHO05D005612 1.7e-96 357.8 555 45.4
Nitab4.5_0001671g0130 Nicotiana tabacum HOM05D004574 ORTHO05D005612 1.7e-96 357.8 710 40.8
BraA05t22709Z Brassica rapa HOM05D004574 ORTHO05D005612 2.9e-96 357.1 624 44.6
CAN.G518.8 Capsicum annuum HOM05D004574 ORTHO05D005612 2.9e-96 357.1 707 39.9
A05p39200 Brassica napus HOM05D004574 ORTHO05D005612 5.0e-96 356.3 642 43.6
Sp3g08180 Schrenkiella parvula HOM05D004574 ORTHO05D005612 1.9e-95 354.4 644 42.5
Cc06_g07390 Coffea canephora HOM05D004574 ORTHO05D005612 7.2e-95 352.4 615 41.8
MBI14_g15649_MAGBIO Magnolia biondii HOM05D004574 ORTHO05D005612 1.0e-93 348.6 661 39.8
Aa31LG3G2320 Aethionema arabicum HOM05D004574 ORTHO05D005612 3.0e-93 347.1 659 41.1
Aqoxy7G03519 Aquilegia oxysepala HOM05D004574 ORTHO05D005612 5.2e-93 346.3 690 40.6
ECA236G2347 Erigeron canadensis HOM05D004574 ORTHO05D005612 5.2e-93 346.3 657 40.0
Nitab4.5_0001151g0100 Nicotiana tabacum HOM05D004574 ORTHO05D005612 1.5e-92 344.7 725 39.9
BcaC05g29707 Brassica carinata HOM05D004574 ORTHO05D005612 7.5e-92 342.4 637 43.0
Lsat_1_v5_gn_8_60221 Lactuca sativa HOM05D004574 ORTHO05D005612 4.1e-90 336.7 683 39.2
Nn8g39728 Nelumbo nucifera HOM05D004574 ORTHO05D005612 7.0e-90 335.9 639 39.6
Sopen07g003110 Solanum pennellii HOM05D004574 ORTHO05D005612 1.2e-89 335.1 646 41.2
Sabra06G0145700 Salix brachista HOM05D004574 ORTHO05D005612 2.0e-89 334.3 632 38.8
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 2.7e-89 334.0 681 38.0
AUR62041455 Chenopodium quinoa HOM05D004574 ORTHO05D005612 1.0e-88 332.0 655 40.6
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 5.0e-88 329.7 645 40.0
Peaxi162Scf00347g00125 Petunia axillaris HOM05D004574 ORTHO05D005612 1.9e-87 327.8 703 39.7
CSS0049430 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 6.1e-86 322.8 516 45.2
EL10Ac8g18810 Beta vulgaris HOM05D004574 ORTHO05D005612 6.8e-85 319.3 730 36.7
SGA_v2.0_scaffold229G43349 Striga asiatica HOM05D004574 ORTHO05D005612 8.8e-85 318.9 634 39.9
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 3.4e-84 317.0 571 43.3
Solyc07g007040.4 Solanum lycopersicum HOM05D004574 ORTHO05D005612 1.3e-83 315.1 650 39.4
Dinv42911 Davidia involucrata HOM05D004574 ORTHO05D005612 4.1e-82 310.1 473 45.2
Dinv43190 Davidia involucrata HOM05D004574 ORTHO05D005612 4.1e-82 310.1 473 45.2
PSO170G6219 Papaver somniferum HOM05D004574 ORTHO05D005612 7.0e-82 309.3 550 44.0
Ah.09g223910 Amaranthus hybridus HOM05D004574 ORTHO05D005612 3.5e-81 307.0 477 45.5
AUR62011249 Chenopodium quinoa HOM05D004574 ORTHO05D005612 3.6e-78 297.0 782 34.7
DCAR_014931 Daucus carota HOM05D004574 ORTHO05D005612 3.4e-76 290.4 576 41.7
Hma1.2p1_0182F.1_g080580 Hydrangea macrophylla HOM05D004574 ORTHO05D005612 2.9e-72 277.3 439 44.2
HPP92_005340 Vanilla planifolia HOM05D004574 ORTHO05D005612 8.6e-72 275.8 515 40.2
CDE05G2637 Ceratophyllum demersum HOM05D004574 ORTHO05D005612 5.6e-71 273.1 601 36.9
Eucgr.C04065 Eucalyptus grandis HOM05D004574 ORTHO05D005612 5.6e-71 273.1 536 39.9
Zm00001eb028250 Zea mays HOM05D004574 ORTHO05D005612 1.2e-70 271.9 575 37.9
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 2.1e-70 271.2 648 36.9
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 5.7e-68 263.1 595 37.0
ATR0629G131 Amborella trichopoda HOM05D004574 ORTHO05D005612 2.9e-67 260.8 610 36.6
SEGI_33529 Sequoiadendron giganteum HOM05D004574 ORTHO05D005612 2.3e-61 241.1 565 37.3
TAR625G1332 Trochodendron aralioides HOM05D004574 ORTHO05D005612 2.3e-61 241.1 283 54.1
Hma1.2p1_1784F.1_g302190 Hydrangea macrophylla HOM05D004574 ORTHO05D005612 4.4e-52 210.3 279 50.2
COL.COLO4_24086 Corchorus olitorius HOM05D004574 ORTHO05D005612 5.8e-52 209.9 366 42.1
unitig_0.g517 Utricularia gibba HOM05D004574 ORTHO05D005612 9.8e-52 209.1 460 37.6
COL.COLO4_24085 Corchorus olitorius HOM05D004574 ORTHO05D005612 1.8e-45 188.3 274 46.7
Eucgr.L02934 Eucalyptus grandis HOM05D004574 ORTHO05D005612 4.0e-45 187.2 566 33.7
CSS0003558 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 2.6e-44 184.5 377 39.8
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 3.5e-41 174.1 173 62.4
SHI03239 Sapria himalayana HOM05D004574 ORTHO05D005612 1.3e-40 172.2 401 37.2
TAR625G0795 Trochodendron aralioides HOM05D004574 ORTHO05D005612 5.1e-40 170.2 318 41.2
Os08g0288500 Oryza sativa ssp. japonica HOM05D004574 ORTHO05D005612 1.6e-38 165.2 333 37.5
Pp3c15_19210 Physcomitrium patens HOM05D004574 ORTHO05D005612 6.2e-38 163.3 596 30.5
Pp3c15_19211 Physcomitrium patens HOM05D004574 ORTHO05D005612 6.2e-38 163.3 596 30.5
Phvul.003G175200 Phaseolus vulgaris HOM05D004574 ORTHO05D005612 9.9e-36 156.0 220 48.6
Eucgr.L01317 Eucalyptus grandis HOM05D004574 ORTHO05D005612 1.7e-35 155.2 376 36.2
Hma1.2p1_2402F.1_g321400 Hydrangea macrophylla HOM05D004574 ORTHO05D005612 8.4e-35 152.9 332 35.8
Mapoly0074s0045 Marchantia polymorpha HOM05D004574 ORTHO05D005612 1.3e-30 139.0 642 29.0
Eucgr.L02096 Eucalyptus grandis HOM05D004574 ORTHO05D005612 2.8e-30 137.9 229 42.4
VMungo1215G3011 Vigna mungo HOM05D004574 ORTHO05D005612 2.8e-30 137.9 131 63.4
SEGI_00197 Sequoiadendron giganteum HOM05D000238 ORTHO05D001889 3.2e-26 124.4 321 36.1
Eucgr.L03201 Eucalyptus grandis HOM05D004574 ORTHO05D005612 7.4e-23 113.2 275 35.6
VMungo1215G1435 Vigna mungo HOM05D004574 ORTHO05D005612 3.1e-21 107.8 121 55.4
Eucgr.L03484 Eucalyptus grandis HOM05D004574 ORTHO05D005612 9.0e-21 106.3 190 42.1
SHI03242 Sapria himalayana HOM05D004574 ORTHO05D005612 9.0e-21 106.3 222 38.7
Hma1.2p1_1784F.1_g302200 Hydrangea macrophylla HOM05D004574 ORTHO05D005612 2.0e-20 105.1 125 51.2
AagrBONN_evm.TU.Sc2ySwM_340.493 Anthoceros agrestis HOM05D004574 ORTHO05D005612 4.9e-19 100.5 279 32.3
Eucgr.C04073 Eucalyptus grandis HOM05D004574 ORTHO05D005612 5.5e-18 97.1 200 40.0
HPP92_005314 Vanilla planifolia HOM05D004574 ORTHO05D005612 2.1e-14 85.1 120 42.5
VMungo0251G0925 Vigna mungo HOM05D005045 ORTHO05D005612 4.5e-12 77.4 126 43.7
Dinv42910 Davidia involucrata HOM05D004574 ORTHO05D005612 5.8e-12 77.0 93 44.1
Dinv43191 Davidia involucrata HOM05D004574 ORTHO05D005612 5.8e-12 77.0 93 44.1
BolC1t05428H Brassica oleracea HOM05D004574 ORTHO05D005612 8.4e-11 73.2 141 41.1
MBI06_g17844_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D000362 3.2e-10 71.2 115 41.7
FAN28G0742 Fragaria x ananassa HOM05D004574 ORTHO05D005612 4.2e-10 70.9 123 43.1
Eucgr.C04076 Eucalyptus grandis HOM05D004574 ORTHO05D005612 7.1e-10 70.1 61 62.3
ECA247G1966 Erigeron canadensis HOM05D000475 ORTHO05D000343 9.3e-10 69.7 188 34.0
FAN19G2474 Fragaria x ananassa HOM05D004574 ORTHO05D005612 2.7e-09 68.2 95 46.3
MCO14G075 Micromonas commoda HOM05D004574 ORTHO05D005612 3.9e-08 64.3 73 46.6
PRCOL_00005204 Prasinoderma coloniale HOM05D004574 ORTHO05D005612 3.3e-07 61.2 349 26.6
GSVIVG01024262001 Vitis vinifera HOM05D002899 ORTHO05D003850 1.6e-06 58.9 160 33.1
ClCG02G007900 Citrullus lanatus HOM05D002899 ORTHO05D003850 6.3e-06 57.0 70 45.7
Rhsim06G0232100 Rhododendron simsii HOM05D002899 ORTHO05D003850 6.3e-06 57.0 65 49.2
EL10Ac2g02592 Beta vulgaris HOM05D002899 ORTHO05D003850 8.2e-06 56.6 78 44.9
HanXRQChr15g0463941 Helianthus annuus HOM05D002899 ORTHO05D003850 8.2e-06 56.6 70 45.7
Mapoly0046s0040 Marchantia polymorpha HOM05D004574 ORTHO05D010792 8.2e-06 56.6 65 47.7
PGR142G0302 Punica granatum HOM05D002899 ORTHO05D003850 8.2e-06 56.6 74 44.6


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