Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 4.1e-147 524.6 254 100.0
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 1.1e-88 330.5 241 66.4
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 9.7e-88 327.4 233 67.8
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 9.4e-83 310.8 237 65.0
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 2.6e-80 302.8 247 61.1
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 3.1e-78 295.8 233 62.7
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 4.1e-78 295.4 233 62.2
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 2.7e-77 292.7 258 56.6
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 5.9e-77 291.6 226 63.3
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 3.6e-74 282.3 240 58.3
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 4.0e-73 278.9 259 55.2
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 2.0e-72 276.6 265 54.0
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 4.8e-71 271.9 230 57.0
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 2.5e-59 233.0 234 50.0
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 1.0e-57 227.6 237 46.4
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 1.4e-57 227.3 235 49.8
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 9.8e-56 221.1 224 48.7
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 9.8e-56 221.1 239 47.7
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 9.8e-56 221.1 219 49.3
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 9.8e-56 221.1 228 49.6
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.7e-55 220.3 221 50.2
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.7e-55 220.3 222 50.0
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 4.9e-55 218.8 221 48.4
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 8.3e-55 218.0 233 48.1
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 1.8e-54 216.9 220 50.0
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 1.8e-54 216.9 228 47.8
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 4.1e-54 215.7 222 47.7
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 2.0e-53 213.4 231 47.2
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 2.0e-53 213.4 235 46.8
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.7e-53 213.0 223 47.1
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 3.5e-53 212.6 233 48.5
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 4.6e-53 212.2 240 44.6
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 1.7e-52 210.3 220 49.1
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.3e-52 209.9 224 49.1
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 3.0e-52 209.5 220 48.2
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 8.6e-52 208.0 233 45.5
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 1.1e-51 207.6 232 47.8
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 1.1e-51 207.6 220 48.2
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.9e-51 206.8 223 46.6
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 3.3e-51 206.1 226 47.3
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 4.3e-51 205.7 236 44.9
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 4.7e-50 202.2 218 48.2
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 5.2e-49 198.7 240 43.3
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.6e-48 196.4 219 47.5
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 3.4e-48 196.1 245 43.3
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 4.4e-48 195.7 239 43.9
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 4.4e-48 195.7 217 46.5
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 4.4e-48 195.7 225 47.1
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 9.8e-48 194.5 227 44.9
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 2.2e-47 193.4 247 42.5
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 4.9e-47 192.2 240 41.7
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 6.4e-47 191.8 227 43.6
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 8.3e-47 191.4 218 43.6
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 1.1e-46 191.0 224 43.3
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 1.9e-46 190.3 232 45.3
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 1.9e-46 190.3 208 47.6
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 2.4e-46 189.9 240 41.7
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 7.0e-46 188.3 222 42.3
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 2.0e-45 186.8 227 41.9
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 6.0e-45 185.3 234 42.7
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 7.8e-45 184.9 221 44.8
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 4.3e-43 179.1 239 40.2
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 5.6e-43 178.7 237 43.9
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 5.6e-43 178.7 236 40.7
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.2e-42 177.6 227 43.2
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 1.2e-42 177.6 230 42.6
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 1.6e-42 177.2 232 41.8
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.8e-42 176.4 235 42.1
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 3.6e-42 176.0 237 41.4
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 3.6e-42 176.0 230 42.6
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 1.1e-41 174.5 225 41.3
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.8e-41 173.7 239 39.3
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 3.1e-41 172.9 236 41.9
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 3.1e-41 172.9 236 41.9
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 3.4e-40 169.5 221 41.2
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 7.5e-40 168.3 236 41.5
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 7.5e-40 168.3 236 41.5
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 2.9e-39 166.4 229 41.5
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 6.4e-39 165.2 244 37.3
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 8.3e-39 164.9 219 41.1
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 1.1e-38 164.5 232 41.8
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.4e-38 164.1 244 37.3
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.9e-38 163.7 220 42.3
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.4e-38 163.3 215 42.3
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 3.2e-38 162.9 231 39.8
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 2.7e-37 159.8 229 41.5
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 3.5e-37 159.5 179 47.5
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 3.0e-36 156.4 221 39.8
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 2.5e-35 153.3 157 48.4
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 4.3e-35 152.5 144 51.4
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 9.5e-35 151.4 158 47.5
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 6.2e-34 148.7 156 47.4
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.0e-33 146.0 220 38.2
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 8.9e-33 144.8 255 32.2
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 2.6e-32 143.3 228 34.6
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 5.8e-32 142.1 221 37.6
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 1.1e-30 137.9 225 35.1
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 1.2e-29 134.4 302 31.5
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 2.1e-29 133.7 170 40.6
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 4.6e-29 132.5 235 33.2
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 2.5e-27 126.7 298 30.5
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 6.2e-26 122.1 148 45.3
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 1.4e-25 120.9 238 33.2
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 4.0e-25 119.4 154 39.0
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 2.0e-24 117.1 148 43.2
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 3.4e-24 116.3 151 41.7
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 3.5e-21 106.3 143 37.8
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 1.3e-18 97.8 345 22.9
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 3.6e-18 96.3 87 50.6
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 4.0e-17 92.8 74 59.5
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 8.4e-15 85.1 111 40.5
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 1.6e-13 80.9 147 31.3
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 2.7e-13 80.1 89 43.8
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.3e-12 77.8 81 43.2
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 3.9e-12 76.3 91 44.0
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 8.7e-12 75.1 133 37.6
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 1.5e-11 74.3 73 45.2
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 1.5e-11 74.3 67 55.2
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 1.1e-09 68.2 53 58.5
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 9.0e-09 65.1 77 39.0


User provided reference genes

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