Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 4.3e-77 291.2 142 100.0
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 5.5e-64 247.7 131 90.1
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 3.3e-61 238.4 123 91.1
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 5.7e-61 237.7 123 91.1
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 1.3e-60 236.5 123 90.2
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 2.4e-59 232.3 122 89.3
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 1.5e-58 229.6 123 87.8
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 4.5e-58 228.0 123 87.0
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 1.0e-57 226.9 123 85.4
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 2.9e-57 225.3 123 85.4
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 6.5e-57 224.2 127 82.7
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 1.4e-56 223.0 123 82.9
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 1.4e-56 223.0 123 85.4
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 1.9e-56 222.6 123 83.7
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 3.2e-56 221.9 121 84.3
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 4.2e-56 221.5 123 82.9
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 5.5e-56 221.1 122 83.6
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 7.2e-56 220.7 122 83.6
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 7.2e-56 220.7 123 86.2
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 7.2e-56 220.7 123 82.9
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 9.3e-56 220.3 123 83.7
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 1.6e-55 219.5 123 82.9
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 2.1e-55 219.2 123 82.9
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 2.1e-55 219.2 123 83.7
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 2.7e-55 218.8 123 82.9
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 4.6e-55 218.0 121 83.5
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 6.1e-55 217.6 123 81.3
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 6.1e-55 217.6 121 83.5
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 1.0e-54 216.9 123 84.6
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 1.3e-54 216.5 122 82.0
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 1.8e-54 216.1 123 79.7
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 1.8e-54 216.1 126 81.7
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 3.0e-54 215.3 123 80.5
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 3.9e-54 214.9 123 80.5
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 3.9e-54 214.9 123 79.7
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 5.1e-54 214.5 123 81.3
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 8.7e-54 213.8 123 79.7
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 8.7e-54 213.8 125 79.2
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 1.9e-53 212.6 123 80.5
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 2.5e-53 212.2 123 78.9
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 5.7e-53 211.1 120 80.0
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 5.7e-53 211.1 122 80.3
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 5.7e-53 211.1 122 80.3
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 7.4e-53 210.7 123 80.5
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 9.7e-53 210.3 123 78.9
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 9.7e-53 210.3 123 78.9
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 9.7e-53 210.3 123 78.9
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 9.7e-53 210.3 123 78.9
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 1.3e-52 209.9 123 79.7
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 2.2e-52 209.1 123 78.9
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 2.8e-52 208.8 122 80.3
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 3.7e-52 208.4 123 78.0
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 3.7e-52 208.4 123 78.9
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 6.3e-52 207.6 123 78.0
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 8.2e-52 207.2 126 77.0
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 1.4e-51 206.5 123 76.4
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 1.8e-51 206.1 122 77.9
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 2.4e-51 205.7 123 76.4
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 2.4e-51 205.7 122 76.2
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 2.4e-51 205.7 122 78.7
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 4.1e-51 204.9 121 76.9
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 9.1e-51 203.8 123 78.0
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 9.1e-51 203.8 121 77.7
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 1.2e-50 203.4 122 77.9
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 1.5e-50 203.0 126 74.6
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 2.0e-50 202.6 123 75.6
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 2.6e-50 202.2 123 77.2
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 3.4e-50 201.8 122 76.2
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 4.5e-50 201.4 123 75.6
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 4.5e-50 201.4 126 77.0
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 5.9e-50 201.1 106 87.7
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 1.0e-49 200.3 122 76.2
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 1.0e-49 200.3 123 75.6
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 1.3e-49 199.9 123 75.6
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 1.3e-49 199.9 122 77.9
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 1.7e-49 199.5 105 87.6
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 1.7e-49 199.5 122 74.6
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 2.2e-49 199.1 123 73.2
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 2.9e-49 198.7 106 86.8
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 3.8e-49 198.4 121 77.7
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 3.8e-49 198.4 131 72.5
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 5.0e-49 198.0 123 74.8
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 5.0e-49 198.0 120 76.7
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 8.5e-49 197.2 121 74.4
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 1.1e-48 196.8 120 75.8
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 1.4e-48 196.4 123 74.0
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 1.9e-48 196.1 122 75.4
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 3.2e-48 195.3 106 84.9
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 3.2e-48 195.3 106 84.9
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 3.2e-48 195.3 122 75.4
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 5.5e-48 194.5 120 73.3
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 5.5e-48 194.5 123 74.0
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 9.4e-48 193.7 122 74.6
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 9.4e-48 193.7 122 74.6
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 2.1e-47 192.6 123 73.2
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 4.6e-47 191.4 136 67.6
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 7.9e-47 190.7 118 73.7
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 1.0e-46 190.3 105 82.9
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 1.4e-46 189.9 118 74.6
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 6.7e-46 187.6 139 65.5
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 1.5e-45 186.4 105 81.0
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 2.0e-45 186.0 109 77.1
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 2.0e-45 186.0 104 81.7
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 7.4e-45 184.1 106 81.1
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 2.2e-44 182.6 105 81.0
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 6.3e-44 181.0 131 67.2
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 6.3e-44 181.0 106 78.3
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 1.8e-43 179.5 121 70.2
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 4.1e-43 178.3 108 75.0
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 1.5e-42 176.4 106 77.4
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 1.3e-41 173.3 107 73.8
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 1.3e-41 173.3 116 69.8
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 1.4e-40 169.9 106 72.6
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 7.2e-40 167.5 86 86.0
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 7.2e-40 167.5 104 73.1
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 9.4e-40 167.2 106 71.7
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 2.7e-39 165.6 104 71.2
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 3.0e-38 162.2 120 67.5
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 2.6e-37 159.1 104 69.2
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 3.7e-36 155.2 106 67.9
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 3.7e-36 155.2 106 67.9
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 3.7e-36 155.2 106 67.9
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 6.5e-33 144.4 107 64.5
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 2.3e-30 136.0 66 89.4
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 3.0e-30 135.6 111 54.1
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 1.7e-28 129.8 95 65.3
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 6.3e-28 127.9 109 55.0
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 1.8e-27 126.3 123 53.7
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 4.7e-23 111.7 65 75.4
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 1.8e-19 99.8 68 67.6
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 2.7e-18 95.9 69 63.8
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 2.3e-17 92.8 57 75.4
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 2.3e-14 82.8 65 56.9
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 1.5e-13 80.1 50 66.0
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 7.0e-11 71.2 40 67.5
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 1.3e-09 67.0 50 62.0


User provided reference genes

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