Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 3.3e-74 282.0 177 100.0
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 3.2e-53 212.2 182 82.4
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 1.4e-48 196.8 189 65.6
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 1.2e-47 193.7 185 65.9
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 2.0e-47 193.0 189 64.6
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 9.3e-45 184.1 185 62.7
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 1.7e-43 179.9 183 60.1
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 1.3e-35 153.7 179 60.9
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 2.2e-30 136.3 177 55.4
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 1.9e-26 123.2 197 47.2
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 6.2e-25 118.2 200 56.5
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 5.3e-24 115.2 194 47.9
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 1.5e-23 113.6 106 76.4
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.7e-22 110.2 206 39.8
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 1.7e-22 110.2 191 50.3
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 2.9e-22 109.4 202 46.5
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 3.8e-22 109.0 180 49.4
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 3.8e-22 109.0 181 45.3
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 3.8e-22 109.0 206 39.8
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 3.8e-22 109.0 206 40.3
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 4.9e-22 108.6 200 54.5
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 4.9e-22 108.6 172 58.1
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 3.2e-21 105.9 196 50.5
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 9.3e-21 104.4 199 37.2
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 1.6e-20 103.6 211 39.8
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 7.9e-20 101.3 188 51.1
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 3.9e-19 99.0 190 41.1
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 8.7e-19 97.8 179 44.7
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 1.1e-18 97.4 150 60.7
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.1e-18 97.4 150 60.7
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 1.1e-18 97.4 181 44.2
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.5e-18 97.1 173 47.4
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.9e-18 96.7 193 52.3
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 1.9e-18 96.7 204 41.2
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.5e-18 96.3 150 60.0
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 5.7e-18 95.1 200 42.0
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 5.7e-18 95.1 183 47.5
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 9.6e-18 94.4 148 42.6
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 2.8e-17 92.8 191 44.5
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 2.8e-17 92.8 192 42.7
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 3.7e-17 92.4 199 42.2
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 4.8e-17 92.0 202 44.1
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 4.8e-17 92.0 192 52.1
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 8.2e-17 91.3 193 53.9
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.1e-16 90.9 185 44.9
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 1.1e-16 90.9 178 38.8
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 1.4e-16 90.5 140 52.1
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 1.4e-16 90.5 209 37.3
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 1.4e-16 90.5 158 38.0
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.4e-16 89.7 193 53.4
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 3.1e-16 89.4 201 36.3
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 3.1e-16 89.4 196 41.8
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 6.9e-16 88.2 199 46.2
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 9.0e-16 87.8 199 41.7
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 9.0e-16 87.8 180 46.1
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 2.6e-15 86.3 201 46.8
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 2.6e-15 86.3 190 34.7
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 3.4e-15 85.9 148 49.3
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 5.8e-15 85.1 180 46.7
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 5.8e-15 85.1 160 42.5
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 5.8e-15 85.1 156 38.5
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 1.3e-14 84.0 204 34.8
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.3e-14 84.0 201 32.3
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 1.7e-14 83.6 207 43.0
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 2.9e-14 82.8 151 39.7
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 2.9e-14 82.8 151 39.7
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 2.9e-14 82.8 176 41.5
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 3.8e-14 82.4 58 56.9
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 3.8e-14 82.4 174 38.5
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 5.0e-14 82.0 164 50.6
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 6.5e-14 81.6 159 54.1
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.5e-13 79.7 152 47.4
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 4.2e-13 79.0 176 49.4
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 4.2e-13 79.0 165 39.4
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 5.5e-13 78.6 202 39.6
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 9.3e-13 77.8 201 39.3
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 9.3e-13 77.8 175 38.3
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 9.3e-13 77.8 200 49.0
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 1.6e-12 77.0 77 51.9
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 2.1e-12 76.6 188 37.8
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 2.7e-12 76.3 190 42.6
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 4.6e-12 75.5 201 38.8
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 7.9e-12 74.7 190 34.2
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 1.3e-11 73.9 142 47.2
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 1.3e-11 73.9 174 37.4
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 1.3e-11 73.9 191 39.8
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 1.3e-11 73.9 73 52.1
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 1.3e-11 73.9 190 50.5
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 1.3e-11 73.9 200 31.5
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 1.8e-11 73.6 195 32.8
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 1.8e-11 73.6 199 38.7
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 8.7e-11 71.2 174 50.6
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 8.7e-11 71.2 161 32.3
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 3.3e-10 69.3 192 40.6
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 4.3e-10 68.9 142 32.4
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 9.7e-10 67.8 77 46.8
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.4e-08 63.2 69 47.8
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 3.1e-08 62.8 154 40.3
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 4.1e-08 62.4 184 38.0
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.6e-07 59.7 77 44.2
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 2.6e-07 59.7 66 47.0
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 2.9e-06 56.2 42 57.1
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 5.0e-06 55.5 156 51.3


User provided reference genes

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