Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 4.6e-129 464.5 231 100.0
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 4.4e-103 378.3 228 80.3
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 1.0e-99 367.1 231 77.5
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 7.2e-98 360.9 231 76.2
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 1.8e-96 356.3 231 77.1
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 5.7e-95 351.3 231 73.6
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.7e-94 349.7 231 74.0
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 4.8e-94 348.2 220 74.1
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 6.3e-94 347.8 231 73.6
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 3.8e-91 338.6 219 73.1
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 2.1e-89 332.8 220 74.1
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 3.1e-85 318.9 231 64.5
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 3.5e-84 315.5 229 65.1
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 1.3e-83 313.5 231 65.8
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 2.3e-83 312.8 231 63.6
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 3.8e-83 312.0 226 66.8
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 5.0e-83 311.6 223 65.0
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.5e-82 310.1 218 66.1
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.9e-82 309.7 220 69.1
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 4.2e-82 308.5 227 64.8
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 7.2e-82 307.8 218 65.6
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 9.5e-82 307.4 231 63.2
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.6e-81 306.6 231 64.1
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 1.6e-81 306.6 222 65.3
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 6.1e-81 304.7 223 63.2
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 8.0e-81 304.3 230 63.5
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 8.0e-81 304.3 240 62.9
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.4e-80 303.5 220 63.6
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.4e-80 303.5 224 65.2
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.8e-80 303.1 220 63.6
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 2.3e-80 302.8 227 64.3
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 3.0e-80 302.4 223 64.1
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 4.0e-80 302.0 226 62.4
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 1.5e-79 300.1 228 62.3
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.6e-79 299.3 220 62.7
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 3.4e-79 298.9 223 63.2
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 4.4e-79 298.5 222 62.2
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 5.7e-79 298.1 220 64.1
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 7.5e-79 297.7 218 62.8
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 7.5e-79 297.7 226 61.1
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 9.8e-79 297.4 218 62.8
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.3e-78 297.0 216 63.9
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 2.2e-78 296.2 218 64.2
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 2.8e-78 295.8 221 62.9
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 4.9e-78 295.0 218 62.8
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 4.9e-78 295.0 218 61.9
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 4.9e-78 295.0 212 66.0
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 4.9e-78 295.0 219 63.5
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 6.3e-78 294.7 213 65.7
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 8.3e-78 294.3 216 62.0
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.1e-77 293.9 219 62.6
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 1.8e-77 293.1 221 63.8
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 4.1e-77 292.0 217 62.2
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 5.4e-77 291.6 225 60.9
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 7.0e-77 291.2 216 65.7
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 7.0e-77 291.2 230 59.6
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 7.0e-77 291.2 221 61.1
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 9.2e-77 290.8 214 61.7
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 1.6e-76 290.0 205 66.8
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 2.0e-76 289.7 216 63.0
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 2.7e-76 289.3 213 64.3
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 7.8e-76 287.7 213 63.4
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 3.8e-75 285.4 217 60.4
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 2.5e-74 282.7 217 61.3
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 3.3e-74 282.3 216 63.9
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 9.5e-74 280.8 217 61.3
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.6e-73 280.0 219 61.2
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 6.1e-73 278.1 219 61.2
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 6.1e-73 278.1 213 62.9
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 1.8e-72 276.6 285 49.1
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 3.0e-72 275.8 221 60.2
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 4.0e-72 275.4 216 57.9
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 1.2e-71 273.9 211 61.6
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 3.4e-71 272.3 219 60.7
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 4.4e-71 271.9 181 70.2
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 5.8e-71 271.6 230 59.1
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 7.5e-71 271.2 217 59.9
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 2.2e-70 269.6 219 60.3
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 6.4e-70 268.1 223 59.6
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 8.3e-70 267.7 223 59.6
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 8.3e-70 267.7 223 59.6
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 8.3e-70 267.7 223 59.6
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.4e-69 266.9 215 59.1
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 7.0e-69 264.6 211 60.2
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.7e-68 262.7 211 59.7
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 4.6e-68 261.9 222 57.2
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 7.8e-68 261.2 211 57.8
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 8.6e-67 257.7 216 56.9
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 9.5e-66 254.2 213 55.4
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 1.6e-65 253.4 220 55.0
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 2.6e-63 246.1 178 64.0
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 3.4e-63 245.7 213 54.0
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 9.8e-63 244.2 223 57.0
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.3e-62 243.8 228 51.8
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.3e-62 243.8 249 47.4
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.2e-61 239.2 177 64.4
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 7.0e-61 238.0 178 63.5
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 7.8e-60 234.6 176 61.4
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 1.3e-59 233.8 222 51.8
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 2.3e-59 233.0 228 50.9
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 1.6e-57 226.9 162 67.3
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 8.9e-56 221.1 175 59.4
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 7.5e-55 218.0 156 63.5
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 4.9e-54 215.3 224 49.1
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.1e-53 214.2 218 51.8
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 1.2e-52 210.7 219 48.9
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 1.3e-51 207.2 219 45.2
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 5.6e-50 201.8 141 68.1
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.6e-49 200.3 213 46.0
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 2.8e-49 199.5 212 45.3
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 6.2e-49 198.4 210 46.7
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.8e-48 196.8 219 47.0
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 1.2e-47 194.1 212 45.3
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 5.8e-47 191.8 158 58.2
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 1.2e-41 174.1 167 55.1
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.6e-39 164.9 161 51.6
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.2e-36 157.5 113 66.4
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 4.6e-28 129.0 121 57.9
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 2.3e-27 126.7 220 31.8
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 1.4e-24 117.5 82 62.2
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 3.5e-20 102.8 94 47.9
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 3.5e-20 102.8 222 28.8
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 7.1e-13 78.6 54 68.5
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 1.6e-12 77.4 54 70.4
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 1.3e-11 74.3 119 33.6
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 1.3e-09 67.8 43 62.8
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 1.6e-09 67.4 75 46.7
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 4.5e-07 59.3 74 45.9


User provided reference genes

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