Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21426_v3 Cicer arietinum L. HOM05D013061 ORTHO05D001207 3.4e-74 281.6 142 100.0
Psat4g021840 Pisum sativum HOM05D013061 ORTHO05D001207 2.6e-58 228.8 142 82.4
TPR.G25403 Trifolium pratense HOM05D013061 ORTHO05D001207 5.9e-58 227.6 143 79.7
Medtr4g122660 Medicago truncatula HOM05D001578 ORTHO05D001207 5.5e-56 221.1 142 78.9
Glyma.17G035600 Glycine max HOM05D013061 ORTHO05D001207 2.8e-44 182.2 140 67.9
Phvul.003G116500 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.0e-41 173.7 142 60.6
Lj4g0008198 Lotus japonicus HOM05D013061 ORTHO05D001207 4.7e-39 164.9 126 67.5
Lalb_Chr15g0089141 Lupinus albus HOM05D013061 ORTHO05D019266 6.3e-20 101.3 121 46.3
Medtr2g033720 Medicago truncatula HOM05D013061 ORTHO05D019266 1.0e-17 94.0 134 40.3
Psat1g162240 Pisum sativum HOM05D013061 ORTHO05D019266 1.9e-16 89.7 133 39.8
Medtr2g033740 Medicago truncatula HOM05D013061 ORTHO05D019266 1.2e-15 87.0 135 38.5
TPR.G33856 Trifolium pratense HOM05D013061 ORTHO05D019266 8.0e-15 84.3 138 36.2
Ciclev10006032m.g Citrus clementina HOM05D001578 ORTHO05D001207 1.5e-13 80.1 130 36.2
TPR.G33859 Trifolium pratense HOM05D013061 ORTHO05D019266 9.8e-13 77.4 145 32.4
Duzib151G0695 Durio zibethinus HOM05D001578 ORTHO05D001207 1.7e-12 76.6 122 35.2
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 3.7e-12 75.5 122 36.1
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 2.4e-11 72.8 122 33.6
Dinv44262 Davidia involucrata HOM05D001578 ORTHO05D001207 4.1e-11 72.0 132 32.6
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 7.0e-11 71.2 119 32.8
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 7.0e-11 71.2 131 31.3
Duzib052G1048 Durio zibethinus HOM05D001578 ORTHO05D001207 2.0e-10 69.7 130 30.8
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 2.7e-10 69.3 130 31.5
Potri.009G083500 Populus trichocarpa HOM05D001578 ORTHO05D001207 2.7e-10 69.3 119 30.3
Prupe.1G113800 Prunus persica HOM05D001578 ORTHO05D001207 2.7e-10 69.3 121 32.2
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 7.8e-10 67.8 134 35.1
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 7.8e-10 67.8 133 31.6
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 7.8e-10 67.8 133 31.6
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 7.8e-10 67.8 134 35.8
Thecc.04G304900 Theobroma cacao HOM05D001578 ORTHO05D001207 7.8e-10 67.8 122 31.1
Cpa.g.sc9.27 Carica papaya HOM05D001578 ORTHO05D001207 1.3e-09 67.0 115 28.7
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 1.7e-09 66.6 127 32.3
Glyma.17G036300 Glycine max HOM05D001578 ORTHO05D001207 2.9e-09 65.9 128 28.9
PGR004G2339 Punica granatum HOM05D001578 ORTHO05D001207 3.8e-09 65.5 122 32.0
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 5.0e-09 65.1 122 28.7
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 5.0e-09 65.1 122 28.7
Glyma.15G138400 Glycine max HOM05D001578 ORTHO05D001207 5.0e-09 65.1 134 34.3
Manes.15G098100 Manihot esculenta HOM05D001578 ORTHO05D001207 8.6e-09 64.3 126 30.2
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 1.1e-08 63.9 122 32.0
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.1e-08 63.9 122 32.0
VMungo1215G1199 Vigna mungo HOM05D001578 ORTHO05D001207 1.1e-08 63.9 119 30.3
VMungo0540G0744 Vigna mungo HOM05D001578 ORTHO05D001207 1.5e-08 63.5 134 33.6
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 1.9e-08 63.2 117 32.5
Glyma.17G036100 Glycine max HOM05D001578 ORTHO05D001207 1.9e-08 63.2 134 32.8
CiPaw.01G135600 Carya illinoinensis HOM05D001578 ORTHO05D001207 3.3e-08 62.4 132 28.0
CiPaw.01G135900 Carya illinoinensis HOM05D001578 ORTHO05D001207 3.3e-08 62.4 132 27.3
Ca_21409_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 3.3e-08 62.4 122 29.5
Ca_21424_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 3.3e-08 62.4 122 29.5
Ca_21425_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 3.3e-08 62.4 122 29.5
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 3.3e-08 62.4 134 31.3
Manes.15G002000 Manihot esculenta HOM05D001578 ORTHO05D001207 3.3e-08 62.4 118 29.7
VMungo1215G0592 Vigna mungo HOM05D001578 ORTHO05D001207 3.3e-08 62.4 134 31.3
Sabra10G0043600 Salix brachista HOM05D001578 ORTHO05D001207 4.3e-08 62.0 127 28.3
Lalb_Chr07g0181941 Lupinus albus HOM05D001578 ORTHO05D001207 5.6e-08 61.6 124 29.0
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 5.6e-08 61.6 121 32.2
Phvul.003G116900 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 5.6e-08 61.6 134 31.3
MSTRG.16314 Avicennia marina HOM05D001578 ORTHO05D001207 7.3e-08 61.2 119 29.4
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 7.3e-08 61.2 119 29.4
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 7.3e-08 61.2 131 30.5
Eucgr.H04067 Eucalyptus grandis HOM05D001578 ORTHO05D001207 9.5e-08 60.8 123 31.7
Lalb_Chr12g0200791 Lupinus albus HOM05D001578 ORTHO05D001207 9.5e-08 60.8 121 30.6
MD13G1149800 Malus domestica HOM05D001578 ORTHO05D001207 9.5e-08 60.8 121 32.2
Manes.02G201700 Manihot esculenta HOM05D001578 ORTHO05D001207 9.5e-08 60.8 138 26.8
Phvul.003G117100 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 9.5e-08 60.8 128 29.7
Potri.008G102600 Populus trichocarpa HOM05D001578 ORTHO05D001207 9.5e-08 60.8 126 29.4
TPR.G25401 Trifolium pratense HOM05D001578 ORTHO05D001207 1.2e-07 60.5 119 29.4
Dinv18323 Davidia involucrata HOM05D000034 ORTHO05D000277 1.6e-07 60.1 88 35.2
Lj6g0025245 Lotus japonicus HOM05D013061 ORTHO05D019266 1.6e-07 60.1 124 31.5
Ciclev10006511m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.1e-07 59.7 118 29.7
CARHR037580 Cardamine hirsuta HOM05D001578 ORTHO05D001207 2.8e-07 59.3 132 29.5
Gohir.A10G174050 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.8e-07 59.3 109 33.0
Ca_21411_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 3.6e-07 58.9 116 30.2
Gohir.A05G275500 Gossypium hirsutum HOM05D001578 ORTHO05D001207 3.6e-07 58.9 114 32.5
Lj4g0021583 Lotus japonicus HOM05D001578 ORTHO05D001207 4.7e-07 58.5 121 29.8
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 4.7e-07 58.5 121 29.8
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 6.1e-07 58.2 122 31.1
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 6.1e-07 58.2 133 29.3
TPR.G25409 Trifolium pratense HOM05D001578 ORTHO05D001207 6.1e-07 58.2 131 30.5
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 8.0e-07 57.8 123 30.9
Psat0s4829g0040 Pisum sativum HOM05D001578 ORTHO05D001207 8.0e-07 57.8 122 30.3
Manes.15G002100 Manihot esculenta HOM05D001578 ORTHO05D001207 1.0e-06 57.4 119 31.1
Gohir.D05G277600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.4e-06 57.0 114 31.6
Gorai.009G290600 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.4e-06 57.0 114 31.6
Manes.03G207100 Manihot esculenta HOM05D001578 ORTHO05D001207 1.4e-06 57.0 122 30.3
Potri.001G288500 Populus trichocarpa HOM05D001578 ORTHO05D001207 1.4e-06 57.0 86 29.1
Sabra10G0043700 Salix brachista HOM05D001578 ORTHO05D001207 1.4e-06 57.0 132 26.5
MBI04_g03340_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D001261 1.8e-06 56.6 116 31.0
AL1G54460 Arabidopsis lyrata HOM05D001578 ORTHO05D001207 3.0e-06 55.8 132 28.0
BcaB07g33804 Brassica carinata HOM05D001578 ORTHO05D001207 3.0e-06 55.8 132 28.0
Cfa015283 Carpinus fangiana HOM05D001578 ORTHO05D001207 3.0e-06 55.8 122 26.2
Duzib177G0524 Durio zibethinus HOM05D001578 ORTHO05D001207 3.0e-06 55.8 123 26.8
Potri.010G063000 Populus trichocarpa HOM05D001578 ORTHO05D001207 3.0e-06 55.8 132 27.3
TPR.G33864 Trifolium pratense HOM05D001578 ORTHO05D001207 3.0e-06 55.8 122 30.3
Gohir.A01G035200 Gossypium hirsutum HOM05D001578 ORTHO05D001207 4.0e-06 55.5 132 27.3
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 4.0e-06 55.5 128 30.5
Medtr4g122800 Medicago truncatula HOM05D001578 ORTHO05D001207 5.2e-06 55.1 122 26.2
Psat1g162120 Pisum sativum HOM05D001578 ORTHO05D001207 5.2e-06 55.1 121 28.9
Ciclev10032808m.g Citrus clementina HOM05D001445 ORTHO05D001261 6.8e-06 54.7 136 31.6
Duzib052G0880 Durio zibethinus HOM05D001578 ORTHO05D001207 6.8e-06 54.7 121 28.9
Migut.M01936 Erythranthe guttata HOM05D001578 ORTHO05D001207 6.8e-06 54.7 124 24.2
Medtr2g033670 Medicago truncatula HOM05D013061 ORTHO05D019266 6.8e-06 54.7 81 38.3
Solyc12g099200.2 Solanum lycopersicum HOM05D001578 ORTHO05D001207 6.8e-06 54.7 131 27.5
Sopen12g033880 Solanum pennellii HOM05D001578 ORTHO05D001207 6.8e-06 54.7 131 27.5
Thhalv10011825m.g Eutrema salsugineum HOM05D001578 ORTHO05D001207 8.9e-06 54.3 132 28.0
Lj6g0003953 Lotus japonicus HOM05D001578 ORTHO05D001207 8.9e-06 54.3 122 32.0
Sc12g0010290 Simmondsia chinensis HOM05D001578 ORTHO05D001207 8.9e-06 54.3 118 26.3
TPR.G25397 Trifolium pratense HOM05D001578 ORTHO05D001207 8.9e-06 54.3 119 25.2


User provided reference genes

Program Settings