Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21387_v3 Cicer arietinum L. HOM05D002950 ORTHO05D009601 3.0e-81 305.1 146 100.0
TPR.G12622 Trifolium pratense HOM05D002950 ORTHO05D009601 2.6e-61 238.8 213 59.2
Psat0ss1196g0560 Pisum sativum HOM05D002950 ORTHO05D009601 3.2e-59 231.9 212 57.5
Medtr4g123700 Medicago truncatula HOM05D002950 ORTHO05D009601 2.7e-58 228.8 212 57.1
Lalb_Chr12g0200711 Lupinus albus HOM05D002950 ORTHO05D009601 1.3e-52 209.9 211 51.2
Glyma.17G038600 Glycine max HOM05D002950 ORTHO05D009601 1.7e-52 209.5 207 52.7
Lj4g0024176 Lotus japonicus HOM05D002950 ORTHO05D009601 2.2e-52 209.1 210 53.3
Glyma.07G233600 Glycine max HOM05D002950 ORTHO05D009601 5.5e-51 204.5 212 51.9
Phvul.003G119500 Phaseolus vulgaris HOM05D002950 ORTHO05D009601 6.0e-50 201.1 212 50.5
VMungo1215G2080 Vigna mungo HOM05D002950 ORTHO05D009601 2.8e-47 192.2 203 51.7
arahy.Tifrunner.gnm1.ann1.S2XP9D Arachis hypogaea HOM05D002950 ORTHO05D009601 1.2e-45 186.8 212 48.1
arahy.Tifrunner.gnm1.ann1.IY3TI3 Arachis hypogaea HOM05D002950 ORTHO05D009601 2.9e-44 182.2 212 47.2
CiPaw.02G071200 Carya illinoinensis HOM05D002950 ORTHO05D009601 1.0e-41 173.7 206 46.6
Cfa015715 Carpinus fangiana HOM05D002950 ORTHO05D009601 1.3e-41 173.3 211 46.4
Haze_00799 Corylus avellana HOM05D002950 ORTHO05D009601 5.1e-41 171.4 208 47.6
CANSAT78G2179 Cannabis sativa HOM05D002950 ORTHO05D009601 1.1e-40 170.2 208 46.6
Thecc.04G310000 Theobroma cacao HOM05D002950 ORTHO05D009601 2.5e-40 169.1 209 45.5
GSVIVG01017668001 Vitis vinifera HOM05D002950 ORTHO05D009601 2.5e-40 169.1 211 46.0
Atru.chr4.3124 Acer truncatum HOM05D002950 ORTHO05D009601 1.6e-39 166.4 208 44.2
ClCG05G006810 Citrullus lanatus HOM05D002950 ORTHO05D009601 2.8e-39 165.6 209 43.5
CsaV3_3G015460 Cucumis sativus L. HOM05D002950 ORTHO05D009601 3.7e-39 165.2 176 48.3
QL06p013758 Quercus lobata HOM05D002950 ORTHO05D009601 6.3e-39 164.5 205 45.4
Ciclev10005553m.g Citrus clementina HOM05D002950 ORTHO05D009601 8.2e-39 164.1 207 43.0
Cc03_g00300 Coffea canephora HOM05D002950 ORTHO05D009601 1.4e-38 163.3 208 42.3
Rhsim04G0246700 Rhododendron simsii HOM05D002950 ORTHO05D009601 1.4e-38 163.3 204 43.1
TWI09G0698 Tripterygium wilfordii HOM05D002950 ORTHO05D009601 1.4e-38 163.3 213 44.6
Potri.008G099800 Populus trichocarpa HOM05D002950 ORTHO05D009601 2.4e-38 162.5 202 43.1
Duzib212G0182 Durio zibethinus HOM05D002950 ORTHO05D009601 4.1e-38 161.8 209 41.6
Potri.010G152900 Populus trichocarpa HOM05D002950 ORTHO05D009601 4.1e-38 161.8 208 42.8
Sabra08G0075500 Salix brachista HOM05D002950 ORTHO05D009601 5.3e-38 161.4 202 43.1
FAN07G1569 Fragaria x ananassa HOM05D002950 ORTHO05D009601 1.2e-37 160.2 178 47.2
FvH4_4g21130 Fragaria vesca HOM05D002950 ORTHO05D009601 2.6e-37 159.1 178 46.6
vmacro07994 Vaccinium macrocarpon HOM05D002950 ORTHO05D009601 2.6e-37 159.1 203 42.4
Dinv29530 Davidia involucrata HOM05D002950 ORTHO05D009601 3.4e-37 158.7 203 42.9
RcHm_v2.0_Chr4g0426711 Rosa chinensis HOM05D002950 ORTHO05D009601 3.4e-37 158.7 176 47.7
Sed0010906 Sechium edule HOM05D002950 ORTHO05D009601 3.4e-37 158.7 210 42.4
COL.COLO4_34541 Corchorus olitorius HOM05D000108 ORTHO05D001378 4.5e-37 158.3 183 46.4
Manes.15G003500 Manihot esculenta HOM05D002950 ORTHO05D009601 5.9e-37 157.9 191 44.5
FAN17G2745 Fragaria x ananassa HOM05D002950 ORTHO05D009601 7.7e-37 157.5 176 46.0
CSS0018037 Camellia sinensis var. sinensis HOM05D002950 ORTHO05D009601 1.0e-36 157.1 203 40.9
Cpa.g.sc146.44 Carica papaya HOM05D002950 ORTHO05D009601 1.3e-36 156.8 177 46.3
THA.LOC104821807 Tarenaya hassleriana HOM05D002950 ORTHO05D009601 1.3e-36 156.8 218 41.3
Prupe.1G108900 Prunus persica HOM05D002950 ORTHO05D009601 3.8e-36 155.2 202 43.6
TAR365G0202 Trochodendron aralioides HOM05D002950 ORTHO05D009601 8.5e-36 154.1 195 44.1
Aqoxy2G02562 Aquilegia oxysepala HOM05D002950 ORTHO05D009601 1.1e-35 153.7 212 39.2
Nitab4.5_0008210g0020 Nicotiana tabacum HOM05D002950 ORTHO05D009601 1.1e-35 153.7 209 41.1
Gohir.A09G241900 Gossypium hirsutum HOM05D002950 ORTHO05D009601 1.4e-35 153.3 209 40.2
Oeu022694.1 Olea europaea HOM05D002950 ORTHO05D009601 1.9e-35 152.9 181 43.1
Migut.N00014 Erythranthe guttata HOM05D002950 ORTHO05D009601 3.2e-35 152.1 189 42.3
Lj6P699T26 Lonicera japonica HOM05D002950 ORTHO05D009601 3.2e-35 152.1 175 44.0
MD16G1139400 Malus domestica HOM05D002950 ORTHO05D009601 3.2e-35 152.1 256 37.5
Gohir.D09G242600 Gossypium hirsutum HOM05D002950 ORTHO05D009601 4.2e-35 151.8 178 43.3
Gorai.006G266300 Gossypium raimondii HOM05D002950 ORTHO05D009601 4.2e-35 151.8 209 39.2
Actinidia18498 Actinidia chinensis HOM05D007075 ORTHO05D009601 7.2e-35 151.0 201 41.3
DCAR_023384 Daucus carota HOM05D002950 ORTHO05D009601 7.2e-35 151.0 212 39.2
Nitab4.5_0004088g0080 Nicotiana tabacum HOM05D002950 ORTHO05D009601 1.2e-34 150.2 202 41.1
Hma1.2p1_1160F.1_g262450 Hydrangea macrophylla HOM05D002950 ORTHO05D009601 1.6e-34 149.8 175 43.4
CAN.G756.8 Capsicum annuum HOM05D002950 ORTHO05D009601 2.1e-34 149.4 210 40.0
AUR62002569 Chenopodium quinoa HOM05D002950 ORTHO05D009601 2.7e-34 149.1 135 51.9
PGSC0003DMG400034090 Solanum tuberosum HOM05D007075 ORTHO05D009601 2.7e-34 149.1 175 44.6
PGSC0003DMG400001713 Solanum tuberosum HOM05D007075 ORTHO05D009601 3.6e-34 148.7 177 44.1
Lsat_1_v5_gn_1_40601 Lactuca sativa HOM05D002950 ORTHO05D009601 4.6e-34 148.3 179 42.5
PSO210G4875 Papaver somniferum HOM05D002950 ORTHO05D009601 7.9e-34 147.5 213 38.5
Peaxi162Scf00102g01048 Petunia axillaris HOM05D002950 ORTHO05D009601 1.0e-33 147.1 203 40.4
Sabra10G0117600 Salix brachista HOM05D002950 ORTHO05D009601 1.0e-33 147.1 175 44.0
PGR031G3485 Punica granatum HOM05D002950 ORTHO05D009601 1.8e-33 146.4 195 40.5
AUR62029990 Chenopodium quinoa HOM05D002950 ORTHO05D009601 2.3e-33 146.0 193 39.9
PSO761G0183 Papaver somniferum HOM05D002950 ORTHO05D009601 2.3e-33 146.0 213 38.0
Solyc01g088500.3 Solanum lycopersicum HOM05D002950 ORTHO05D009601 2.3e-33 146.0 210 39.5
Sc25g0001510 Simmondsia chinensis HOM05D002950 ORTHO05D009601 3.0e-33 145.6 172 42.4
Sopen01g035360 Solanum pennellii HOM05D002950 ORTHO05D009601 6.7e-33 144.4 177 42.9
HanXRQChr11g0350781 Helianthus annuus HOM05D002950 ORTHO05D009601 1.5e-32 143.3 192 40.6
Nn3g21871 Nelumbo nucifera HOM05D002950 ORTHO05D009601 1.7e-31 139.8 183 41.5
SGA_v2.0_scaffold227G43205 Striga asiatica HOM05D002950 ORTHO05D009601 2.2e-31 139.4 203 38.4
Sp3g15520 Schrenkiella parvula HOM05D002950 ORTHO05D009601 2.8e-31 139.0 218 39.4
AL3G30400 Arabidopsis lyrata HOM05D002950 ORTHO05D009601 4.8e-31 138.3 218 39.4
MELO3C031621.2 Cucumis melo HOM05D002950 ORTHO05D009601 4.8e-31 138.3 159 45.9
Carub.0003s1706 Capsella rubella HOM05D002950 ORTHO05D009601 1.8e-30 136.3 220 37.7
CARHR092670 Cardamine hirsuta HOM05D002950 ORTHO05D009601 1.8e-30 136.3 207 39.6
MBI18_g28903_MAGBIO Magnolia biondii HOM05D002950 ORTHO05D009601 4.1e-30 135.2 204 36.8
Thhalv10021189m.g Eutrema salsugineum HOM05D002950 ORTHO05D009601 3.4e-29 132.1 227 36.1
AT3G17350 Arabidopsis thaliana HOM05D002950 ORTHO05D009601 1.7e-28 129.8 219 37.0
A05p32400 Brassica napus HOM05D002950 ORTHO05D009601 5.0e-28 128.3 211 38.4
BraA05t22067Z Brassica rapa HOM05D002950 ORTHO05D009601 1.1e-27 127.1 211 37.9
BcaC05g28795 Brassica carinata HOM05D002950 ORTHO05D009601 2.7e-26 122.5 222 35.1
C05p49040 Brassica napus HOM05D002950 ORTHO05D009601 2.7e-26 122.5 222 35.1
BolC5t33644H Brassica oleracea HOM05D002950 ORTHO05D009601 2.7e-26 122.5 222 35.1
Actinidia15968 Actinidia chinensis HOM05D002950 ORTHO05D009601 3.6e-26 122.1 172 42.4
Aa31LG8G4270 Aethionema arabicum HOM05D002950 ORTHO05D009601 1.0e-25 120.6 183 36.6
BraA05t22068Z Brassica rapa HOM05D002950 ORTHO05D009601 2.3e-25 119.4 216 34.7
Eucgr.D01123 Eucalyptus grandis HOM05D007075 ORTHO05D009601 2.0e-24 116.3 220 32.3
EL10Ac3g06273 Beta vulgaris HOM05D002950 ORTHO05D009601 2.6e-24 115.9 229 31.4
ATR0796G185 Amborella trichopoda HOM05D002950 ORTHO05D009601 3.3e-24 115.5 176 37.5
A05p32410 Brassica napus HOM05D002950 ORTHO05D009601 4.4e-24 115.2 220 33.6
Hund12245 Selenicereus undatus HOM05D002950 ORTHO05D009601 4.1e-22 108.6 114 50.0
SEGI_11155 Sequoiadendron giganteum HOM05D002950 ORTHO05D009601 7.7e-21 104.4 177 35.0
SHI00063 Sapria himalayana HOM05D002950 ORTHO05D009601 1.3e-12 77.0 97 38.1
ECA234G4429 Erigeron canadensis HOM05D007075 ORTHO05D009601 1.3e-07 60.5 37 62.2


User provided reference genes

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