Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21362_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 3.7e-33 144.4 81 100.0
Psat4g020920 Pisum sativum HOM05D002165 ORTHO05D001531 6.6e-22 107.1 79 72.2
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 8.6e-22 106.7 81 71.6
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 4.3e-21 104.4 78 67.9
Glyma.17G042500 Glycine max HOM05D002165 ORTHO05D001531 1.2e-20 102.8 81 69.1
Medtr4g124220 Medicago truncatula HOM05D002165 ORTHO05D001531 8.0e-20 100.1 82 78.0
Lalb_Chr12g0200511 Lupinus albus HOM05D002165 ORTHO05D001531 1.8e-19 99.0 70 72.9
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 4.0e-19 97.8 83 67.5
Ca_02322_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 6.8e-19 97.1 79 64.6
Ca_30364_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 6.8e-19 97.1 79 64.6
Glyma.15G185700 Glycine max HOM05D002165 ORTHO05D001531 1.7e-17 92.4 79 62.0
Lj6g0008561 Lotus japonicus HOM05D002165 ORTHO05D001531 1.7e-17 92.4 79 60.8
Glyma.09G080700 Glycine max HOM05D002165 ORTHO05D001531 4.9e-17 90.9 79 60.8
Medtr2g044970 Medicago truncatula HOM05D002165 ORTHO05D001531 8.3e-17 90.1 79 60.8
Phvul.009G221200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.9e-16 89.0 77 63.6
Phvul.009G221300 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.9e-16 89.0 78 62.8
Lalb_Chr13g0299051 Lupinus albus HOM05D002165 ORTHO05D001531 5.4e-16 87.4 80 60.0
Psat1g016840 Pisum sativum HOM05D002165 ORTHO05D001531 9.2e-16 86.7 78 60.3
Lalb_Chr08g0232971 Lupinus albus HOM05D002165 ORTHO05D001531 1.2e-15 86.3 79 57.0
Psat1g017000 Pisum sativum HOM05D002165 ORTHO05D001531 2.0e-15 85.5 78 59.0
Phvul.009G221400 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 3.5e-15 84.7 79 58.2
Glyma.15G185400 Glycine max HOM05D002165 ORTHO05D001531 1.0e-14 83.2 84 54.8
Phvul.009G221100 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 1.0e-14 83.2 79 57.0
Lalb_Chr11g0073701 Lupinus albus HOM05D002165 ORTHO05D001531 8.6e-14 80.1 79 57.0
MD13G1137400 Malus domestica HOM05D002165 ORTHO05D001531 1.1e-13 79.7 77 53.2
MD16G1133300 Malus domestica HOM05D002165 ORTHO05D001531 1.1e-13 79.7 77 54.5
Glyma.15G185600 Glycine max HOM05D002165 ORTHO05D001531 2.5e-13 78.6 60 63.3
Glyma.09G080800 Glycine max HOM05D002165 ORTHO05D001531 7.3e-13 77.0 60 63.3
RcHm_v2.0_Chr4g0427981 Rosa chinensis HOM05D002165 ORTHO05D001531 7.3e-13 77.0 71 54.9
TPR.G29438 Trifolium pratense HOM05D002165 ORTHO05D001531 7.3e-13 77.0 72 56.9
MD13G1137300 Malus domestica HOM05D002165 ORTHO05D001531 9.5e-13 76.6 74 54.1
FvH4_4g21750 Fragaria vesca HOM05D002165 ORTHO05D001531 2.8e-12 75.1 71 53.5
FAN07G0342 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.8e-12 75.1 71 53.5
FAN12G3878 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.8e-12 75.1 71 53.5
FAN17G1996 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.8e-12 75.1 71 53.5
TPR.G29235 Trifolium pratense HOM05D002165 ORTHO05D001531 2.8e-12 75.1 79 54.4
Lalb_Chr11g0073721 Lupinus albus HOM05D002165 ORTHO05D001531 3.6e-12 74.7 71 54.9
Lalb_Chr11g0073691 Lupinus albus HOM05D002165 ORTHO05D001531 4.7e-12 74.3 79 53.2
Lalb_Chr11g0073711 Lupinus albus HOM05D002165 ORTHO05D001531 4.7e-12 74.3 71 56.3
Lalb_Chr11g0073741 Lupinus albus HOM05D002165 ORTHO05D001531 4.7e-12 74.3 79 54.4
Medtr2g044960 Medicago truncatula HOM05D002165 ORTHO05D001531 6.2e-12 73.9 79 51.9
CiPaw.02G068700 Carya illinoinensis HOM05D002165 ORTHO05D001531 1.1e-11 73.2 77 50.6
MELO3C006762.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.8e-11 72.4 90 53.3
Prupe.1G207900 Prunus persica HOM05D002165 ORTHO05D001531 4.0e-11 71.2 76 51.3
CiPaw.01G127300 Carya illinoinensis HOM05D002165 ORTHO05D001531 2.0e-10 68.9 74 50.0
Sed0018176 Sechium edule HOM05D002165 ORTHO05D001531 2.0e-10 68.9 86 53.5
Phvul.009G221500 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 5.8e-10 67.4 63 55.6
QL06p014681 Quercus lobata HOM05D002165 ORTHO05D001531 1.3e-09 66.2 68 51.5
CsaV3_3G015630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.7e-09 65.9 75 54.7
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 3.7e-09 64.7 86 46.5
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 4.9e-09 64.3 75 48.0
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 4.9e-09 64.3 75 48.0
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 4.9e-09 64.3 75 48.0
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 4.9e-09 64.3 75 48.0
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 4.9e-09 64.3 75 48.0
AUR62002532 Chenopodium quinoa HOM05D002165 ORTHO05D001531 4.9e-09 64.3 73 53.4
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.1e-08 63.2 71 52.1
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.1e-08 63.2 71 52.1
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.1e-08 63.2 71 52.1
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-08 62.4 80 52.5
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 1.9e-08 62.4 76 47.4
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 2.4e-08 62.0 77 49.4
Sc16g0009410 Simmondsia chinensis HOM05D002165 ORTHO05D001531 2.4e-08 62.0 44 63.6
Aa31LG8G4440 Aethionema arabicum HOM05D002165 ORTHO05D001531 4.1e-08 61.2 73 45.2
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 4.1e-08 61.2 47 66.0
AT5G26620 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 4.1e-08 61.2 47 66.0
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 4.1e-08 61.2 47 66.0
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 5.4e-08 60.8 50 62.0
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 7.1e-08 60.5 80 46.2
BcaB06g25836 Brassica carinata HOM05D002165 ORTHO05D001531 9.2e-08 60.1 73 46.6
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 9.2e-08 60.1 50 62.0
EL10Ac4g09564 Beta vulgaris HOM05D002165 ORTHO05D001531 1.2e-07 59.7 44 59.1
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 1.2e-07 59.7 82 43.9
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 1.2e-07 59.7 82 43.9
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 1.2e-07 59.7 82 43.9
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 1.6e-07 59.3 75 45.3
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 1.6e-07 59.3 75 45.3
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 1.6e-07 59.3 75 45.3
GSVIVG01017707001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.6e-07 59.3 71 49.3
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 2.1e-07 58.9 83 44.6
BcaC05g28774 Brassica carinata HOM05D002165 ORTHO05D001531 2.1e-07 58.9 73 46.6
C05p48810 Brassica napus HOM05D002165 ORTHO05D001531 2.1e-07 58.9 73 46.6
BolC5t33619H Brassica oleracea HOM05D002165 ORTHO05D001531 2.1e-07 58.9 73 46.6
Cfa015751 Carpinus fangiana HOM05D002165 ORTHO05D001531 2.1e-07 58.9 68 55.9
AUR62023661 Chenopodium quinoa HOM05D002165 ORTHO05D001531 2.1e-07 58.9 72 52.8
Duzib128G1662 Durio zibethinus HOM05D002165 ORTHO05D001531 2.1e-07 58.9 82 47.6
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 2.1e-07 58.9 82 43.9
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 2.1e-07 58.9 38 71.1
Ah.06g190740 Amaranthus hybridus HOM05D002165 ORTHO05D001531 2.7e-07 58.5 46 52.2
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 2.7e-07 58.5 75 45.3
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 2.7e-07 58.5 75 45.3
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 2.7e-07 58.5 75 45.3
BraA05t22057Z Brassica rapa HOM05D002165 ORTHO05D001531 2.7e-07 58.5 73 46.6
Cpa.g.sc146.6 Carica papaya HOM05D002165 ORTHO05D001531 2.7e-07 58.5 67 49.3
EL10Ac3g06229 Beta vulgaris HOM05D002165 ORTHO05D001531 3.5e-07 58.2 65 49.2
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 3.5e-07 58.2 82 43.9
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 3.5e-07 58.2 75 45.3
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 3.5e-07 58.2 75 45.3
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 3.5e-07 58.2 75 45.3
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 3.5e-07 58.2 75 45.3
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 3.5e-07 58.2 82 43.9
A05p32290 Brassica napus HOM05D002165 ORTHO05D001531 3.5e-07 58.2 73 46.6
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 3.5e-07 58.2 75 45.3
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 3.5e-07 58.2 75 45.3
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 3.5e-07 58.2 75 45.3
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 3.5e-07 58.2 82 43.9
Potri.010G003900 Populus trichocarpa HOM05D002165 ORTHO05D001531 3.5e-07 58.2 88 48.9
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 4.6e-07 57.8 79 43.0
BcaC01g03752 Brassica carinata HOM05D002165 ORTHO05D001531 4.6e-07 57.8 86 41.9
BolC3t17173H Brassica oleracea HOM05D002165 ORTHO05D001531 4.6e-07 57.8 86 41.9
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 4.6e-07 57.8 83 43.4
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 4.6e-07 57.8 83 47.0
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 6.0e-07 57.4 75 44.0
Ah.10g026790 Amaranthus hybridus HOM05D002165 ORTHO05D001531 6.0e-07 57.4 46 54.3
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 6.0e-07 57.4 50 62.0
A03p40240 Brassica napus HOM05D002165 ORTHO05D001531 6.0e-07 57.4 86 41.9
C03p48940 Brassica napus HOM05D002165 ORTHO05D001531 6.0e-07 57.4 79 44.3
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 6.0e-07 57.4 50 62.0
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 6.0e-07 57.4 50 62.0
AUR62000479 Chenopodium quinoa HOM05D002165 ORTHO05D001531 6.0e-07 57.4 40 62.5
AUR62006822 Chenopodium quinoa HOM05D002165 ORTHO05D001531 6.0e-07 57.4 40 62.5
Gohir.D09G243000 Gossypium hirsutum HOM05D002165 ORTHO05D001531 6.0e-07 57.4 86 46.5
Gorai.006G266800 Gossypium raimondii HOM05D002165 ORTHO05D001531 6.0e-07 57.4 86 46.5
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 7.8e-07 57.0 78 48.7
Gohir.A09G242300 Gossypium hirsutum HOM05D002165 ORTHO05D001531 7.8e-07 57.0 86 46.5
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 1.0e-06 56.6 81 48.1
BcaC05g30083 Brassica carinata HOM05D002165 ORTHO05D001531 1.0e-06 56.6 81 48.1
A05p42200 Brassica napus HOM05D002165 ORTHO05D001531 1.0e-06 56.6 81 48.1
C05p61420 Brassica napus HOM05D002165 ORTHO05D001531 1.0e-06 56.6 81 48.1
BolC5t34800H Brassica oleracea HOM05D002165 ORTHO05D001531 1.0e-06 56.6 81 48.1
BraA05t22939Z Brassica rapa HOM05D002165 ORTHO05D001531 1.0e-06 56.6 81 48.1
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 1.0e-06 56.6 82 43.9
Carub.0003s1728 Capsella rubella HOM05D002165 ORTHO05D001531 1.3e-06 56.2 79 43.0
CARHR092880 Cardamine hirsuta HOM05D002165 ORTHO05D001531 1.3e-06 56.2 86 40.7
Gohir.A02G059800 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.7e-06 55.8 76 47.4
Gohir.D02G065400 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.7e-06 55.8 76 47.4
Gorai.005G074100 Gossypium raimondii HOM05D002165 ORTHO05D001531 1.7e-06 55.8 76 47.4
Nn4g25284 Nelumbo nucifera HOM05D002165 ORTHO05D001531 1.7e-06 55.8 40 65.0
BraA03t13177Z Brassica rapa HOM05D002165 ORTHO05D001531 2.3e-06 55.5 79 43.0
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.3e-06 55.5 78 46.2
Thecc.04G314700 Theobroma cacao HOM05D002165 ORTHO05D001531 2.3e-06 55.5 86 46.5
AL3G30640 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 3.0e-06 55.1 83 39.8
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 3.0e-06 55.1 66 53.0
DCAR_023419 Daucus carota HOM05D002165 ORTHO05D001531 3.0e-06 55.1 70 48.6
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.0e-06 55.1 85 41.2
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.0e-06 55.1 84 40.5
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.9e-06 54.7 82 40.2
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.9e-06 54.7 82 40.2
Sabra10G0003300 Salix brachista HOM05D002165 ORTHO05D001531 3.9e-06 54.7 63 46.0
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 5.1e-06 54.3 84 42.9
COL.COLO4_36933 Corchorus olitorius HOM05D002165 ORTHO05D001531 5.1e-06 54.3 81 45.7
Thhalv10022047m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 5.1e-06 54.3 76 43.4
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 6.6e-06 53.9 69 44.9
BcaB04g18950 Brassica carinata HOM05D002165 ORTHO05D001531 8.6e-06 53.5 74 43.2
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.6e-06 53.5 81 40.7


User provided reference genes

Program Settings