Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 7.8e-132 473.8 236 100.0
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 1.3e-91 340.1 179 96.6
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 1.3e-83 313.5 172 91.9
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 2.3e-83 312.8 173 90.8
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 1.3e-81 307.0 175 89.7
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 4.5e-79 298.5 180 83.3
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 7.7e-79 297.7 184 83.7
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 1.3e-78 297.0 182 84.6
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 4.2e-77 292.0 165 90.3
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 5.5e-77 291.6 174 83.9
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 7.2e-77 291.2 174 84.5
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 9.7e-74 280.8 180 80.0
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 2.8e-73 279.3 182 77.5
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 1.8e-72 276.6 171 84.2
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 5.3e-72 275.0 183 79.2
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 9.1e-64 247.7 151 82.1
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 9.1e-64 247.7 165 74.5
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 2.2e-62 243.0 166 71.1
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 2.2e-62 243.0 164 73.8
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 3.8e-62 242.3 172 72.1
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.1e-61 240.7 165 73.9
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 3.2e-61 239.2 167 71.3
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 3.2e-61 239.2 164 72.0
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 4.2e-61 238.8 164 72.6
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 4.2e-61 238.8 167 71.3
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 5.5e-61 238.4 175 69.7
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 7.2e-61 238.0 166 71.1
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 7.2e-61 238.0 164 73.2
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 2.1e-60 236.5 164 70.7
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 2.1e-60 236.5 167 71.3
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 2.7e-60 236.1 158 72.8
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 2.7e-60 236.1 159 74.2
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 3.6e-60 235.7 169 70.4
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 3.6e-60 235.7 169 69.2
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 4.7e-60 235.3 155 75.5
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 6.1e-60 235.0 167 73.1
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 6.1e-60 235.0 164 72.0
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 6.1e-60 235.0 163 73.0
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 6.1e-60 235.0 169 69.2
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 1.4e-59 233.8 166 71.1
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 1.4e-59 233.8 176 67.0
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 1.8e-59 233.4 164 69.5
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 2.3e-59 233.0 158 72.8
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 2.3e-59 233.0 175 70.3
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 2.3e-59 233.0 165 70.3
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 3.0e-59 232.6 158 74.1
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 5.2e-59 231.9 158 71.5
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 5.2e-59 231.9 163 69.3
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 6.7e-59 231.5 160 71.2
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 8.8e-59 231.1 165 70.9
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 1.1e-58 230.7 166 69.9
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 2.6e-58 229.6 158 71.5
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 2.6e-58 229.6 163 68.1
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 2.6e-58 229.6 163 69.9
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 4.4e-58 228.8 163 69.9
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 4.4e-58 228.8 164 70.1
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 5.7e-58 228.4 164 68.3
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 7.5e-58 228.0 161 72.0
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 7.5e-58 228.0 165 70.3
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 7.5e-58 228.0 174 67.2
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 7.5e-58 228.0 163 71.2
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 7.5e-58 228.0 168 68.5
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 7.5e-58 228.0 169 68.6
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 9.7e-58 227.6 164 70.1
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 2.2e-57 226.5 165 70.3
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 2.8e-57 226.1 172 68.6
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 3.7e-57 225.7 164 69.5
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 4.8e-57 225.3 159 68.6
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 6.3e-57 224.9 158 70.9
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 6.3e-57 224.9 167 68.9
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 6.3e-57 224.9 158 70.3
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 8.2e-57 224.6 158 69.6
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 8.2e-57 224.6 158 69.6
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 8.2e-57 224.6 170 69.4
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.1e-56 224.2 161 70.8
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 1.4e-56 223.8 157 68.8
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 1.4e-56 223.8 197 59.4
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 1.8e-56 223.4 158 69.6
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 3.1e-56 222.6 161 70.2
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 4.1e-56 222.2 155 71.6
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 4.1e-56 222.2 155 72.9
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 5.3e-56 221.9 156 71.8
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 7.0e-56 221.5 154 69.5
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 2.0e-55 219.9 158 69.0
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 2.6e-55 219.5 158 69.0
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 4.5e-55 218.8 159 68.6
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 4.5e-55 218.8 166 66.3
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 5.9e-55 218.4 165 66.7
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 1.0e-54 217.6 156 68.6
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 1.3e-54 217.2 154 68.8
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.7e-54 216.9 157 69.4
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.7e-54 216.9 166 66.9
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 2.9e-54 216.1 154 68.2
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 2.9e-54 216.1 162 67.3
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 3.8e-54 215.7 159 67.9
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 5.0e-54 215.3 156 70.5
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 1.5e-53 213.8 174 62.1
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 1.9e-53 213.4 158 68.4
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 5.5e-53 211.8 154 67.5
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 1.0e-51 207.6 164 65.2
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 1.8e-51 206.8 157 68.2
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 3.0e-51 206.1 152 67.1
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 6.8e-51 204.9 158 65.8
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 8.8e-51 204.5 160 66.9
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.5e-50 203.8 170 62.4
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 3.4e-50 202.6 165 66.1
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 5.7e-50 201.8 159 64.8
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 1.3e-49 200.7 219 53.4
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 1.3e-49 200.7 146 66.4
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 2.2e-49 199.9 152 66.4
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 2.2e-49 199.9 198 57.1
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.8e-49 198.7 159 64.2
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 1.1e-48 197.6 158 64.6
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 7.7e-47 191.4 160 56.9
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 1.0e-46 191.0 148 65.5
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 1.3e-46 190.7 149 64.4
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 2.9e-46 189.5 164 60.4
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 1.1e-45 187.6 172 58.1
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 5.5e-45 185.3 166 58.4
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.6e-44 183.7 138 69.6
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 5.7e-42 175.3 127 67.7
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 1.7e-41 173.7 116 73.3
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 4.1e-40 169.1 131 63.4
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 7.0e-40 168.3 182 51.1
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 9.1e-40 167.9 112 70.5
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 1.2e-39 167.5 149 57.0
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 3.8e-38 162.5 156 55.8
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 5.6e-37 158.7 113 73.5
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 1.6e-36 157.1 152 52.6
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 8.0e-36 154.8 155 56.8
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 1.4e-35 154.1 144 55.6
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 2.3e-35 153.3 111 73.9
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 1.2e-34 151.0 155 54.2
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 3.2e-32 142.9 157 54.1
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 3.2e-32 142.9 110 67.3
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 1.3e-30 137.5 105 67.6
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 3.0e-30 136.3 96 76.0
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 6.6e-30 135.2 98 63.3
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 1.5e-29 134.0 163 49.1
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 4.7e-28 129.0 108 65.7
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 6.2e-28 128.6 90 77.8
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 1.2e-26 124.4 99 66.7
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 1.3e-25 120.9 160 42.5
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 3.2e-24 116.3 85 72.9
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 5.4e-24 115.5 80 67.5
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 6.6e-22 108.6 135 40.0
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 1.8e-19 100.5 70 70.0
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 2.2e-17 93.6 74 59.5
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 4.9e-17 92.4 52 78.8
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 1.1e-16 91.3 151 37.1
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 1.6e-15 87.4 58 72.4
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 1.6e-15 87.4 58 72.4
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 3.9e-14 82.8 190 30.0
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 4.3e-13 79.3 111 48.6
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 3.6e-12 76.3 153 34.6
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 8.1e-12 75.1 55 72.7
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 3.1e-11 73.2 52 78.8
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 1.4e-08 64.3 45 66.7
arahy.Tifrunner.gnm1.ann1.7621NS Arachis hypogaea HOM05D054750 ORTHO05D005573 1.0e-06 58.2 32 84.4
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 5.1e-06 55.8 46 56.5


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