Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 0.0e+00 1705.6 862 100.0
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 0.0e+00 1212.6 853 74.7
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 0.0e+00 1155.6 853 72.1
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 0.0e+00 1094.3 841 68.8
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 5.7e-297 1024.2 845 64.3
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 1.6e-291 1006.1 837 64.5
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 7.4e-289 997.3 830 62.2
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 9.0e-287 990.3 823 62.7
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 5.0e-285 984.6 847 63.5
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 1.3e-261 906.7 932 55.4
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 1.5e-252 876.7 578 79.1
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 7.1e-223 778.1 553 73.4
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 1.0e-205 721.1 860 47.0
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 1.1e-191 674.5 841 45.7
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 1.9e-191 673.7 842 45.2
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 7.9e-190 668.3 829 46.3
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 5.8e-185 652.1 818 45.6
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 5.8e-185 652.1 839 45.3
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 3.2e-183 646.4 846 44.1
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 3.2e-183 646.4 799 44.4
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 4.2e-183 646.0 840 43.8
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 1.3e-181 641.0 797 45.3
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 1.1e-178 631.3 960 41.0
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.8e-176 622.9 843 43.7
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.9e-175 620.5 797 42.7
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 1.9e-175 620.5 797 42.7
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.7e-174 616.7 843 43.4
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 4.6e-174 615.9 839 45.1
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 7.9e-174 615.1 796 42.6
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 1.5e-169 600.9 822 42.9
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 1.9e-167 594.0 836 40.8
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 3.7e-163 579.7 670 46.4
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 6.3e-163 578.9 819 42.1
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 2.6e-161 573.5 852 41.0
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 3.4e-161 573.2 817 42.5
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 7.2e-159 565.5 857 39.7
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 3.9e-157 559.7 841 39.5
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 6.7e-157 558.9 762 41.6
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 5.7e-156 555.8 853 38.9
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 3.7e-155 553.1 556 53.6
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.8e-154 550.8 688 44.0
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 9.1e-154 548.5 793 40.5
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 1.6e-153 547.7 826 41.2
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 5.5e-151 539.3 824 39.6
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 1.8e-149 534.3 897 38.6
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 1.8e-149 534.3 785 41.7
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 1.2e-148 531.6 848 40.1
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 1.5e-148 531.2 849 40.0
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 1.4e-146 524.6 841 40.4
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 2.0e-145 520.8 827 39.4
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 2.7e-145 520.4 821 39.3
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 5.0e-144 516.2 834 37.9
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 1.1e-143 515.0 596 47.1
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 1.9e-143 514.2 519 54.7
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 1.8e-141 507.7 839 38.4
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 5.0e-136 489.6 821 37.6
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 4.7e-134 483.0 791 39.1
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 4.5e-129 466.5 810 37.9
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 7.3e-127 459.1 873 36.2
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 8.9e-125 452.2 588 42.7
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 4.4e-116 423.3 550 44.2
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 1.6e-110 404.8 740 35.1
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 3.0e-104 384.0 514 45.3
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 6.2e-102 376.3 786 32.8
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 2.9e-99 367.5 490 42.0
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 4.6e-97 360.1 407 48.4
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 3.8e-91 340.5 563 35.7
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.1e-89 334.7 836 31.3
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 5.8e-84 316.6 495 38.6
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 7.6e-84 316.2 467 40.3
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 5.1e-80 303.5 608 33.2
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 1.9e-63 248.4 845 26.9
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 2.5e-63 248.1 391 36.8
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 4.3e-63 247.3 526 31.9
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 7.4e-63 246.5 269 56.1
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 3.4e-60 237.7 140 82.9
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 1.9e-58 231.9 909 26.7
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 5.5e-58 230.3 888 26.2
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 1.0e-51 209.5 199 52.8
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.8e-51 207.6 317 38.2
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 1.8e-45 188.7 297 38.0
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 9.1e-45 186.4 198 48.0
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 5.5e-34 150.6 165 46.1
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 1.5e-31 142.5 202 37.6
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.6e-28 132.5 88 72.7
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 7.0e-21 107.1 168 41.1
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 1.5e-15 89.4 159 39.6
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 7.0e-13 80.5 140 38.6
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 7.8e-12 77.0 168 30.4
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 6.6e-11 73.9 106 43.4
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 2.5e-10 72.0 112 40.2
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 2.5e-10 72.0 192 29.2
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 7.3e-10 70.5 220 27.3
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 9.5e-10 70.1 142 34.5
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 6.1e-09 67.4 157 32.5
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 3.1e-08 65.1 110 35.5
CiPaw.08G030600 Carya illinoinensis HOM05D007669 ORTHO05D009624 4.4e-07 61.2 52 50.0


User provided reference genes

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