Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 5.2e-216 754.2 410 100.0
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 3.4e-175 618.6 364 93.7
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 1.4e-173 613.2 358 91.6
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 7.1e-173 610.9 379 86.8
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 2.3e-171 605.9 364 89.0
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 2.3e-171 605.9 364 88.7
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 5.1e-171 604.7 364 88.7
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 7.3e-170 600.9 364 88.2
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 2.4e-168 595.9 359 88.6
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 3.1e-168 595.5 365 87.7
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 1.5e-167 593.2 364 89.0
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 2.6e-167 592.4 365 87.4
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 1.1e-165 587.0 363 89.3
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 1.9e-165 586.3 367 88.0
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 3.2e-165 585.5 363 89.0
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 4.2e-165 585.1 364 88.5
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 2.1e-164 582.8 374 86.9
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 2.7e-164 582.4 364 84.6
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 1.8e-163 579.7 375 86.7
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 1.5e-162 576.6 364 87.6
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 1.9e-162 576.2 372 86.8
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 2.5e-162 575.9 365 84.4
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 3.3e-162 575.5 364 85.4
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 3.3e-162 575.5 362 88.4
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 5.6e-162 574.7 374 82.6
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 1.3e-161 573.5 366 85.2
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 3.7e-161 572.0 374 81.6
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 4.8e-161 571.6 367 83.4
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 6.2e-161 571.2 356 86.2
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 2.4e-160 569.3 367 86.1
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 9.0e-160 567.4 374 82.4
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 9.0e-160 567.4 340 89.1
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 1.5e-159 566.6 364 87.1
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 1.3e-158 563.5 374 81.0
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 1.3e-158 563.5 374 81.8
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 2.2e-158 562.8 364 82.1
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 6.5e-158 561.2 355 84.2
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 4.2e-157 558.5 374 82.4
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 2.7e-156 555.8 365 83.3
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 3.0e-155 552.4 355 82.8
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 8.2e-153 544.3 360 84.4
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 8.2e-153 544.3 354 85.6
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 4.0e-152 542.0 374 81.6
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 9.0e-152 540.8 374 78.9
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 5.8e-151 538.1 342 83.0
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 1.0e-150 537.3 369 78.0
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 5.0e-150 535.0 359 82.5
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 2.5e-149 532.7 363 79.3
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 7.1e-149 531.2 359 82.5
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 1.2e-148 530.4 359 80.8
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.6e-148 530.0 362 82.9
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 4.6e-148 528.5 357 79.0
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 6.1e-148 528.1 356 82.9
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 7.9e-148 527.7 359 78.3
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.3e-147 526.9 356 82.6
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 1.8e-147 526.6 359 81.9
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 2.3e-147 526.2 355 83.7
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 5.1e-147 525.0 372 79.0
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 8.7e-147 524.2 356 82.3
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 1.5e-146 523.5 344 84.3
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 1.9e-146 523.1 358 82.1
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 2.5e-146 522.7 344 84.3
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 3.3e-146 522.3 369 80.2
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 3.3e-146 522.3 369 80.2
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 9.7e-146 520.8 353 81.3
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 9.7e-146 520.8 344 84.0
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 2.2e-145 519.6 344 80.8
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 2.2e-145 519.6 355 80.6
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 1.1e-144 517.3 342 83.9
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 1.8e-144 516.5 342 83.9
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 9.0e-144 514.2 362 77.3
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 9.0e-144 514.2 398 76.1
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 2.0e-143 513.1 337 84.9
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 2.6e-143 512.7 344 80.2
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 3.4e-143 512.3 356 77.5
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 4.5e-143 511.9 355 80.0
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 7.7e-143 511.1 342 83.3
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 1.7e-142 510.0 355 80.0
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 5.0e-142 508.4 350 81.7
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 1.1e-141 507.3 377 77.7
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 4.2e-141 505.4 359 78.8
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 7.2e-141 504.6 374 79.1
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 7.2e-141 504.6 369 77.8
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.6e-140 503.4 350 77.1
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 1.6e-140 503.4 353 79.0
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 6.1e-140 501.5 371 76.5
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 2.3e-139 499.6 346 79.8
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 2.3e-139 499.6 357 79.3
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 9.7e-138 494.2 363 77.1
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 1.3e-137 493.8 330 83.9
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 2.2e-137 493.0 348 76.1
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 4.8e-137 491.9 345 81.7
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 6.3e-137 491.5 355 79.7
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 8.2e-137 491.1 340 81.8
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 4.1e-136 488.8 357 77.9
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 2.6e-135 486.1 352 79.0
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 4.5e-135 485.3 354 74.9
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 5.9e-135 485.0 342 80.4
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 5.9e-135 485.0 350 77.7
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 3.8e-134 482.3 340 79.7
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 1.1e-133 480.7 352 77.8
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 1.1e-133 480.7 349 77.9
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 1.1e-133 480.7 317 85.8
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 1.9e-133 479.9 350 77.4
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 3.2e-133 479.2 350 78.0
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 3.2e-133 479.2 350 78.0
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 4.2e-133 478.8 359 74.7
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 1.6e-132 476.9 357 74.8
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 2.1e-132 476.5 353 78.2
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 4.7e-132 475.3 372 71.0
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 2.3e-131 473.0 361 74.8
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.1e-130 470.7 350 74.3
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 6.3e-129 464.9 363 70.8
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 2.7e-124 449.5 354 73.7
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 1.3e-121 440.7 345 69.0
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 5.3e-120 435.3 293 82.6
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 1.3e-118 430.6 353 66.3
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.8e-118 429.1 363 63.9
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 7.2e-117 424.9 362 71.3
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 1.2e-114 417.5 283 85.9
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 4.4e-114 415.6 341 65.1
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 8.3e-113 411.4 268 82.8
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.4e-112 410.6 308 75.6
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 5.9e-111 405.2 369 66.9
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.8e-107 393.7 282 76.6
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 6.8e-107 391.7 346 62.1
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.7e-105 387.1 298 67.8
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 7.7e-103 378.3 329 62.6
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 1.5e-101 374.0 354 58.2
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 5.5e-101 372.1 275 74.9
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 7.2e-101 371.7 346 58.1
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 2.1e-100 370.2 218 91.3
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 6.1e-100 368.6 257 77.4
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 3.0e-99 366.3 297 75.4
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.2e-98 364.4 363 56.5
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 3.5e-95 352.8 346 60.1
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 2.1e-92 343.6 267 74.9
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.9e-88 330.5 224 82.1
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 8.1e-68 261.9 172 80.8
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 3.1e-51 206.8 125 88.8
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 5.5e-48 196.1 143 74.8
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 5.6e-45 186.0 123 86.2
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 1.2e-42 178.3 119 79.8
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 4.9e-41 172.9 118 79.7
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 1.4e-32 144.8 97 79.4
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 1.1e-29 135.2 105 69.5
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 3.1e-27 127.1 79 75.9
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 4.1e-27 126.7 86 70.9
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 7.7e-26 122.5 70 81.4
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 6.7e-22 109.4 103 51.5
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 2.8e-20 104.0 81 71.6
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 6.9e-19 99.4 130 50.0
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 7.7e-18 95.9 76 75.0
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 1.7e-17 94.7 81 66.7
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 3.6e-15 87.0 93 51.6
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 3.6e-15 87.0 53 88.7
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 8.8e-14 82.4 71 57.7
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 8.8e-14 82.4 97 53.6
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 1.1e-13 82.0 63 73.0
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 4.8e-12 76.6 42 88.1
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 2.4e-11 74.3 128 44.5
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 7.2e-08 62.8 75 49.3
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 1.2e-07 62.0 56 67.9
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 6.1e-07 59.7 249 25.3
MCO09G810 Micromonas commoda HOM05D004327 ORTHO05D005032 8.0e-07 59.3 163 26.4


User provided reference genes

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