Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 3.1e-226 788.1 395 100.0
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.7e-192 676.0 396 87.6
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 4.7e-190 667.9 400 85.0
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 2.6e-188 662.1 392 83.9
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 6.2e-174 614.4 396 77.8
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 2.2e-171 605.9 397 77.3
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.3e-168 595.9 383 78.3
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 1.9e-167 592.8 392 75.0
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 7.3e-167 590.9 392 75.0
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 4.9e-163 578.2 385 75.1
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 2.4e-162 575.9 397 73.6
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 9.0e-141 504.2 375 66.7
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 1.2e-137 493.8 398 64.6
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.2e-137 493.8 388 63.7
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 7.9e-137 491.1 383 64.8
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 6.7e-136 488.0 398 64.1
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 2.5e-135 486.1 386 64.8
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 4.3e-135 485.3 387 64.6
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 9.7e-135 484.2 389 62.0
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 4.8e-134 481.9 384 64.8
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 6.3e-134 481.5 395 62.5
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.4e-133 479.6 393 62.8
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 2.4e-133 479.6 392 63.5
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 9.0e-133 477.6 397 63.2
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.2e-132 477.2 393 63.6
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.0e-132 476.5 393 62.6
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 2.6e-132 476.1 392 63.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.7e-131 473.4 387 63.0
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 5.0e-131 471.9 394 62.7
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.1e-130 470.7 369 64.5
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.9e-130 469.9 387 62.3
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 4.2e-130 468.8 360 65.8
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.4e-128 463.8 391 60.9
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 2.3e-128 463.0 377 62.9
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 5.1e-128 461.8 390 60.8
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.5e-127 460.3 398 60.8
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.9e-127 459.9 368 64.1
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 7.7e-124 448.0 379 59.9
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.3e-123 447.2 355 62.8
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 5.0e-123 445.3 271 80.8
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.4e-122 443.7 374 61.0
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 1.9e-122 443.4 392 58.9
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.9e-122 443.4 389 58.4
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.5e-122 443.0 366 61.2
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.5e-122 443.0 370 60.8
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 2.7e-121 439.5 390 59.5
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 2.7e-121 439.5 398 60.3
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 2.7e-121 439.5 373 60.6
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 3.6e-121 439.1 401 58.9
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 5.1e-120 435.3 441 53.7
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.1e-119 434.1 401 56.4
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 5.7e-119 431.8 401 56.1
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 5.7e-119 431.8 385 59.2
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 9.7e-119 431.0 314 67.8
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 1.7e-118 430.3 385 58.7
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 8.2e-118 427.9 371 60.6
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 1.2e-116 424.1 377 58.6
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.5e-116 423.7 364 61.0
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.7e-115 420.2 370 60.0
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 3.8e-115 419.1 362 60.2
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 8.5e-115 417.9 376 59.8
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 1.1e-114 417.5 336 63.4
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 5.5e-114 415.2 284 71.1
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.2e-113 414.1 362 59.7
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.6e-113 413.7 362 58.3
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 1.6e-113 413.7 370 58.6
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 3.6e-113 412.5 370 58.9
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 6.1e-113 411.8 362 59.1
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 8.0e-113 411.4 376 58.5
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.4e-112 410.6 349 60.2
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 1.8e-112 410.2 349 60.2
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 3.9e-112 409.1 362 57.5
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 5.2e-112 408.7 349 59.9
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 3.3e-111 406.0 362 58.8
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 4.4e-111 405.6 377 56.2
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.3e-110 404.1 333 61.9
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.3e-110 404.1 377 57.0
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 2.2e-110 403.3 383 54.0
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 3.1e-109 399.4 362 57.5
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 7.0e-109 398.3 347 58.5
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 1.2e-108 397.5 391 52.2
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.6e-108 396.4 393 55.5
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.0e-107 394.4 376 54.8
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 5.5e-106 388.7 383 54.0
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.0e-104 384.4 395 55.4
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 2.3e-104 383.3 301 62.8
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 4.0e-104 382.5 379 53.0
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 3.3e-103 379.4 305 60.7
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 2.9e-99 366.3 285 62.5
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.1e-98 364.4 363 54.0
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.5e-98 364.0 363 53.7
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.2e-97 360.9 405 47.2
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.1e-97 360.1 279 64.5
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.1e-97 360.1 277 64.3
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 9.8e-95 351.3 243 70.4
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 2.7e-92 343.2 378 49.2
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 7.7e-92 341.7 305 59.0
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 2.6e-87 326.6 273 58.6
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.3e-86 324.3 239 66.5
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 5.4e-85 318.9 319 50.8
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 9.2e-85 318.2 213 71.4
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.5e-79 300.8 179 77.1
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 3.2e-77 293.1 306 51.0
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.3e-75 287.7 295 53.6
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.3e-75 287.0 332 47.9
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 6.6e-75 285.4 171 76.0
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.6e-60 237.7 196 63.8
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 8.4e-54 215.3 227 48.5
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 5.3e-48 196.1 137 65.0
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 5.1e-43 179.5 240 43.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.2e-39 168.3 141 61.0
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 7.6e-39 165.6 272 38.6
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.1e-37 161.8 204 44.6
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 6.0e-36 156.0 157 51.0
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 4.0e-24 116.7 71 77.5
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.3e-14 85.1 105 47.6
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 4.6e-12 76.6 55 65.5
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 4.3e-10 70.1 48 64.6


User provided reference genes

Program Settings