Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 3.0e-204 714.9 353 100.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 3.2e-190 668.3 355 92.1
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 8.2e-186 653.7 355 90.4
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 2.9e-183 645.2 355 90.1
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 5.2e-180 634.4 353 87.3
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 2.0e-171 605.9 354 84.7
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.0e-167 593.6 347 83.6
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.9e-166 589.3 345 83.5
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 1.4e-161 573.2 355 79.4
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 4.5e-160 568.2 355 79.2
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 1.1e-137 493.8 356 70.8
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 1.1e-137 493.8 356 70.8
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.1e-137 491.9 354 70.1
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-136 489.6 354 70.1
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 4.6e-136 488.4 349 70.5
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.0e-136 488.0 356 69.7
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 3.9e-135 485.3 359 68.0
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 1.5e-134 483.4 357 68.1
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 6.2e-133 478.0 348 71.0
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 6.4e-130 468.0 353 66.3
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.2e-129 465.7 342 69.3
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.2e-128 463.8 353 65.7
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 2.7e-128 462.6 357 65.3
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 3.5e-128 462.2 358 66.5
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 7.8e-128 461.1 353 66.9
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.3e-127 460.3 353 65.7
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.3e-127 459.5 353 65.4
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 3.0e-127 459.1 354 66.9
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 6.6e-127 458.0 364 65.7
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 2.5e-126 456.1 353 65.2
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 4.3e-126 455.3 357 65.3
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 4.3e-126 455.3 355 65.1
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 7.3e-126 454.5 351 67.0
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.2e-125 453.8 384 62.5
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 2.4e-124 449.5 350 65.7
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.2e-123 447.2 349 65.0
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 2.9e-122 442.6 363 63.9
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 3.8e-122 442.2 364 62.1
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 4.2e-121 438.7 373 60.9
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 5.4e-121 438.3 364 62.9
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.3e-121 437.6 354 65.3
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.6e-120 436.8 364 63.2
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.6e-120 436.8 364 63.2
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 2.5e-118 429.5 358 61.5
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 3.3e-118 429.1 351 63.2
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 4.3e-118 428.7 364 60.2
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 4.3e-118 428.7 364 60.2
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.3e-117 427.2 361 60.1
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 6.2e-117 424.9 358 60.9
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.8e-116 423.3 354 60.7
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 6.9e-116 421.4 358 60.9
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.2e-115 420.6 358 60.9
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-115 419.9 354 62.4
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 2.0e-115 419.9 358 61.7
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 2.6e-115 419.5 358 60.3
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 3.4e-115 419.1 359 60.4
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 5.8e-115 418.3 360 58.6
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.3e-114 417.2 358 60.9
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 2.9e-114 416.0 351 61.8
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 8.4e-114 414.5 353 62.6
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 1.1e-113 414.1 360 60.0
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.4e-113 413.7 353 61.8
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 4.2e-113 412.1 360 60.3
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 2.1e-112 409.8 362 58.0
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 3.5e-112 409.1 361 60.4
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 6.0e-112 408.3 360 59.4
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 6.0e-112 408.3 369 58.3
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 7.9e-112 407.9 365 58.6
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 2.3e-111 406.4 352 61.1
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 3.0e-111 406.0 352 60.8
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 4.3e-110 402.1 355 61.1
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 4.3e-110 402.1 368 59.0
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 5.6e-110 401.7 361 58.2
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.3e-109 400.6 381 57.5
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 6.2e-109 398.3 332 61.7
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 6.9e-108 394.8 347 57.6
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 6.9e-108 394.8 328 62.8
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.2e-107 394.0 368 57.9
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 2.0e-107 393.3 363 58.4
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 2.0e-107 393.3 353 58.6
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.4e-105 387.1 356 57.9
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.9e-105 386.7 336 61.6
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.9e-105 386.7 336 62.2
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 2.4e-105 386.3 336 62.2
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 5.5e-105 385.2 334 57.2
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 7.1e-105 384.8 351 55.8
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 1.2e-104 384.0 344 56.4
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 3.0e-103 379.4 333 61.3
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 6.2e-101 371.7 366 55.2
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 1.5e-99 367.1 361 54.8
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.0e-98 364.4 361 55.7
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 9.3e-97 357.8 237 75.1
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 4.3e-94 349.0 335 56.4
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 7.6e-91 338.2 358 53.6
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 3.0e-87 326.2 264 62.1
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 3.7e-85 319.3 240 65.4
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 2.9e-82 309.7 235 67.7
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.5e-78 297.4 353 47.6
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 9.1e-76 288.1 282 55.0
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 3.2e-73 279.6 353 46.2
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 6.3e-69 265.4 353 40.8
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 5.9e-67 258.8 165 72.7
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.5e-66 255.0 211 64.5
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-65 253.8 211 64.0
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 8.0e-64 248.4 371 39.1
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.0e-64 248.4 211 63.5
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.0e-63 248.1 215 59.1
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 5.2e-63 245.7 213 59.6
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 1.6e-59 234.2 317 44.2
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 2.2e-53 213.8 211 56.4
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 3.2e-49 199.9 145 69.7
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 3.6e-48 196.4 233 49.8
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 8.6e-42 175.3 376 30.9
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 7.3e-41 172.2 144 55.6
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.5e-41 171.8 120 69.2
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.0e-40 168.7 210 49.0
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 9.5e-33 145.2 166 43.4
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.4e-22 109.8 63 81.0
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.4e-20 102.8 63 74.6
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-16 91.3 63 69.8
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 2.7e-11 73.9 159 33.3
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 7.8e-11 72.4 157 30.6
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 6.6e-10 69.3 52 57.7
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 5.6e-09 66.2 53 54.7
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 5.6e-09 66.2 53 54.7
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 5.6e-09 66.2 53 54.7
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 1.6e-08 64.7 82 36.6
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 2.1e-08 64.3 52 53.8
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 2.6e-06 57.4 56 53.6


User provided reference genes

Program Settings