Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 1.2e-88 329.7 154 100.0
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 1.6e-69 266.2 154 81.2
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 1.8e-65 252.7 155 78.7
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 5.5e-62 241.1 154 76.0
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 3.6e-61 238.4 154 73.4
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 6.3e-58 227.6 148 72.3
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 8.3e-58 227.3 148 73.0
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 6.1e-53 211.1 157 66.9
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 6.1e-53 211.1 157 66.9
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 3.2e-49 198.7 152 61.2
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.3e-47 193.4 153 60.8
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 2.3e-47 192.6 143 62.2
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 3.0e-47 192.2 151 60.9
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 5.0e-47 191.4 153 62.7
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 1.1e-46 190.3 155 60.6
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.9e-46 189.5 150 59.3
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 5.6e-46 188.0 163 57.1
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 9.5e-46 187.2 164 56.1
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 1.2e-45 186.8 154 59.1
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.6e-45 186.4 167 54.5
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.8e-45 185.7 163 56.4
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.1e-44 183.7 157 55.4
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 1.4e-44 183.3 160 56.2
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 2.3e-44 182.6 153 58.2
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 6.8e-44 181.0 138 61.6
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.2e-43 180.3 157 54.8
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 1.2e-43 180.3 158 55.7
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 1.5e-43 179.9 142 59.9
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.5e-43 179.9 143 60.1
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.5e-43 179.9 143 60.1
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 4.4e-43 178.3 148 55.4
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 5.8e-43 177.9 161 54.0
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 7.5e-43 177.6 136 60.3
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 7.5e-43 177.6 168 53.0
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 9.8e-43 177.2 136 61.0
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 2.2e-42 176.0 133 61.7
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 3.7e-42 175.3 140 60.7
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 4.9e-42 174.9 136 60.3
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 4.9e-42 174.9 136 58.8
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 6.4e-42 174.5 142 57.7
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 6.4e-42 174.5 161 52.2
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 8.3e-42 174.1 168 53.6
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 8.3e-42 174.1 136 60.3
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.4e-41 173.3 136 60.3
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 2.4e-41 172.6 153 52.9
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 3.2e-41 172.2 126 61.9
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 4.1e-41 171.8 138 59.4
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 4.1e-41 171.8 140 59.3
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 5.4e-41 171.4 135 57.8
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 9.2e-41 170.6 158 51.3
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 9.2e-41 170.6 135 57.8
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 1.2e-40 170.2 126 61.1
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 1.2e-40 170.2 156 55.1
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.2e-40 170.2 143 55.9
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 1.2e-40 170.2 156 55.1
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 1.6e-40 169.9 156 54.5
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 2.7e-40 169.1 140 57.9
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 3.5e-40 168.7 130 59.2
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 3.5e-40 168.7 160 50.0
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 4.6e-40 168.3 143 57.3
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 6.0e-40 167.9 143 58.0
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 7.8e-40 167.5 141 57.4
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 7.8e-40 167.5 160 52.5
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 7.8e-40 167.5 159 51.6
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.0e-39 167.2 160 49.4
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 2.3e-39 166.0 140 57.1
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 5.1e-39 164.9 153 53.6
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 1.1e-38 163.7 156 50.0
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 1.1e-38 163.7 137 58.4
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 2.5e-38 162.5 156 51.9
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.3e-38 162.2 155 52.9
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 7.3e-38 161.0 153 52.9
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.2e-37 160.2 150 51.3
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.6e-37 159.8 154 51.3
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 2.1e-37 159.5 133 54.1
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 4.7e-37 158.3 145 53.1
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 8.1e-37 157.5 137 54.0
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.4e-36 156.8 137 54.0
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.8e-36 156.4 141 51.8
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 3.1e-36 155.6 137 53.3
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 4.0e-36 155.2 150 50.0
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 4.0e-36 155.2 154 49.4
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 4.0e-36 155.2 154 50.0
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 5.2e-36 154.8 137 53.3
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 5.2e-36 154.8 137 53.3
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 5.2e-36 154.8 137 53.3
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 6.8e-36 154.5 137 53.3
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 1.7e-34 149.8 137 50.4
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 4.9e-34 148.3 162 49.4
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 5.4e-33 144.8 128 52.3
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 9.2e-33 144.1 139 49.6
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 3.0e-31 139.0 140 50.7
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 6.6e-31 137.9 105 59.0
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 8.6e-31 137.5 143 49.7
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 3.1e-28 129.0 137 48.2
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 4.0e-28 128.6 150 46.0
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 8.9e-28 127.5 151 43.7
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 7.6e-27 124.4 107 53.3
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 7.6e-27 124.4 126 49.2
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 6.4e-26 121.3 160 38.8
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 1.9e-25 119.8 152 42.1
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 3.2e-25 119.0 125 46.4
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 9.3e-25 117.5 92 58.7
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 2.1e-24 116.3 108 49.1
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 2.8e-21 105.9 80 66.2
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 6.2e-21 104.8 132 38.6
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.4e-20 103.6 87 58.6
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 1.9e-17 93.2 143 41.3
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 4.2e-17 92.0 63 65.1
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 7.9e-16 87.8 131 37.4
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 1.3e-15 87.0 212 28.8
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 2.3e-15 86.3 64 60.9
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 7.3e-14 81.3 101 39.6
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 1.4e-12 77.0 61 55.7
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 4.9e-10 68.6 119 39.5
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.3e-07 59.7 73 42.5
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 4.3e-06 55.5 44 56.8


User provided reference genes

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