Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21103_v3 Cicer arietinum L. HOM05D006152 ORTHO05D008137 7.1e-127 457.2 222 100.0
TPR.G6509 Trifolium pratense HOM05D006152 ORTHO05D008137 5.9e-73 278.1 222 67.6
Glyma.13G155700 Glycine max HOM05D006152 ORTHO05D008137 5.0e-72 275.0 221 66.5
Psat4g007440 Pisum sativum HOM05D006152 ORTHO05D008137 1.9e-71 273.1 217 69.1
TPR.G37046 Trifolium pratense HOM05D006152 ORTHO05D008137 1.9e-71 273.1 222 66.7
Medtr4g131670 Medicago truncatula HOM05D006152 ORTHO05D008137 2.1e-70 269.6 219 65.8
Phvul.003G158400 Phaseolus vulgaris HOM05D006152 ORTHO05D008137 6.8e-69 264.6 219 64.4
VMungo1215G1041 Vigna mungo HOM05D006152 ORTHO05D008137 2.0e-68 263.1 219 64.4
Lalb_Chr12g0198561 Lupinus albus HOM05D006152 ORTHO05D008137 3.1e-66 255.8 219 62.6
Lj4g0021784 Lotus japonicus HOM05D006152 ORTHO05D008137 3.5e-65 252.3 222 62.2
arahy.Tifrunner.gnm1.ann1.L77CZK Arachis hypogaea HOM05D006152 ORTHO05D008137 2.1e-62 243.0 220 59.1
arahy.Tifrunner.gnm1.ann1.QAR9AW Arachis hypogaea HOM05D006152 ORTHO05D008137 2.1e-62 243.0 220 59.1
Sabra06G0143900 Salix brachista HOM05D006152 ORTHO05D008137 1.2e-57 227.3 231 53.7
Sabra06G0145100 Salix brachista HOM05D006152 ORTHO05D008137 1.2e-57 227.3 231 53.7
CSS0025720 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 5.9e-57 224.9 225 56.4
FvH4_1g01320 Fragaria vesca HOM05D006152 ORTHO05D008137 2.9e-56 222.6 224 54.5
Rhsim01G0046600 Rhododendron simsii HOM05D006152 ORTHO05D008137 2.9e-56 222.6 222 56.8
FAN23G2003 Fragaria x ananassa HOM05D006152 ORTHO05D008137 3.8e-56 222.2 224 54.5
Potri.006G188200 Populus trichocarpa HOM05D006152 ORTHO05D008137 5.0e-56 221.9 223 54.7
RcHm_v2.0_Chr2g0086151 Rosa chinensis HOM05D006152 ORTHO05D008137 3.3e-55 219.2 224 54.5
Rhsim01G0042700 Rhododendron simsii HOM05D006152 ORTHO05D008137 7.3e-55 218.0 222 55.4
Prupe.7G259100 Prunus persica HOM05D006152 ORTHO05D008137 2.8e-54 216.1 220 54.5
COL.COLO4_18762 Corchorus olitorius HOM05D006152 ORTHO05D008137 3.6e-54 215.7 225 52.0
Actinidia38346 Actinidia chinensis HOM05D006152 ORTHO05D008137 1.4e-53 213.8 222 53.6
Gorai.009G054000 Gossypium raimondii HOM05D006152 ORTHO05D008137 3.0e-53 212.6 221 54.3
Hma1.2p1_0222F.1_g093210 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 4.0e-53 212.2 218 53.7
QL02p092448 Quercus lobata HOM05D006152 ORTHO05D008137 4.0e-53 212.2 223 53.4
CSS0018805 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 6.8e-53 211.5 223 52.9
CiPaw.16G115700 Carya illinoinensis HOM05D006152 ORTHO05D008137 6.8e-53 211.5 222 53.6
Gohir.D05G052200 Gossypium hirsutum HOM05D006152 ORTHO05D008137 6.8e-53 211.5 221 53.8
Ciclev10008799m.g Citrus clementina HOM05D006152 ORTHO05D008137 1.2e-52 210.7 222 52.7
Duzib168G0440 Durio zibethinus HOM05D006152 ORTHO05D008137 3.4e-52 209.1 224 53.6
Thecc.09G035000 Theobroma cacao HOM05D006152 ORTHO05D008137 3.4e-52 209.1 225 52.0
Gohir.A05G050600 Gossypium hirsutum HOM05D006152 ORTHO05D008137 4.4e-52 208.8 221 55.2
Manes.06G038100 Manihot esculenta HOM05D006152 ORTHO05D008137 4.4e-52 208.8 223 51.1
QL02p092408 Quercus lobata HOM05D006152 ORTHO05D008137 7.5e-52 208.0 224 53.1
Haze_19246 Corylus avellana HOM05D006152 ORTHO05D008137 9.8e-52 207.6 225 53.3
vmacro13046 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 2.2e-51 206.5 223 50.7
vmacro23231 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 2.2e-51 206.5 223 50.7
TWI32G1323 Tripterygium wilfordii HOM05D006152 ORTHO05D008137 1.1e-50 204.1 224 49.1
MD02G1011000 Malus domestica HOM05D006152 ORTHO05D008137 5.4e-50 201.8 220 51.4
Nn2g12295 Nelumbo nucifera HOM05D006152 ORTHO05D008137 2.0e-49 199.9 220 50.9
MBI15_g30906_MAGBIO Magnolia biondii HOM05D006152 ORTHO05D008137 3.5e-49 199.1 224 50.4
Cc06_g15390 Coffea canephora HOM05D006152 ORTHO05D008137 5.9e-49 198.4 222 51.4
Aqoxy1G03917 Aquilegia oxysepala HOM05D006152 ORTHO05D008137 6.6e-48 194.9 221 48.9
PGSC0003DMG400003198 Solanum tuberosum HOM05D006152 ORTHO05D008137 6.6e-48 194.9 218 49.1
MD15G1156000 Malus domestica HOM05D006152 ORTHO05D008137 1.1e-47 194.1 220 50.0
Lj7A453G70 Lonicera japonica HOM05D006152 ORTHO05D008137 1.5e-47 193.7 222 47.7
Oeu043492.1 Olea europaea HOM05D006152 ORTHO05D008137 1.5e-47 193.7 219 48.9
Solyc07g005120.3 Solanum lycopersicum HOM05D006152 ORTHO05D008137 3.3e-47 192.6 220 46.8
Sopen07g001260 Solanum pennellii HOM05D006152 ORTHO05D008137 7.3e-47 191.4 220 47.3
DCAR_019366 Daucus carota HOM05D006152 ORTHO05D008137 9.5e-47 191.0 218 48.6
Nitab4.5_0003856g0050 Nicotiana tabacum HOM05D006152 ORTHO05D008137 1.6e-46 190.3 220 47.7
HanXRQChr10g0314551 Helianthus annuus HOM05D006152 ORTHO05D008137 2.1e-46 189.9 221 49.8
Eucgr.C00382 Eucalyptus grandis HOM05D006152 ORTHO05D008137 4.7e-46 188.7 217 47.5
PSO384G3563 Papaver somniferum HOM05D006152 ORTHO05D008137 4.7e-46 188.7 226 49.6
PSO384G4708 Papaver somniferum HOM05D006152 ORTHO05D008137 4.7e-46 188.7 226 49.6
PGR142G2956 Punica granatum HOM05D006152 ORTHO05D008137 1.0e-45 187.6 220 46.4
CAN.G520.14 Capsicum annuum HOM05D006152 ORTHO05D008137 1.8e-45 186.8 224 47.8
MSTRG.26302 Avicennia marina HOM05D006152 ORTHO05D008137 4.0e-45 185.7 222 45.9
Sed0008154 Sechium edule HOM05D006152 ORTHO05D008137 4.0e-45 185.7 221 47.5
Peaxi162Scf00347g00517 Petunia axillaris HOM05D006152 ORTHO05D008137 1.2e-44 184.1 227 46.7
Sc14g0000030 Simmondsia chinensis HOM05D006152 ORTHO05D008137 2.6e-44 183.0 218 48.6
PSO339G6042 Papaver somniferum HOM05D006152 ORTHO05D008137 4.4e-44 182.2 226 48.7
EL10Ac8g18846 Beta vulgaris HOM05D006152 ORTHO05D008137 4.9e-43 178.7 221 47.1
Migut.K00351 Erythranthe guttata HOM05D006152 ORTHO05D008137 8.3e-43 177.9 218 45.4
ClCG11G003570 Citrullus lanatus HOM05D006152 ORTHO05D008137 2.4e-42 176.4 225 47.1
CsaV3_2G003440 Cucumis sativus L. HOM05D006152 ORTHO05D008137 1.6e-41 173.7 225 44.9
SGA_v2.0_scaffold387G50519 Striga asiatica HOM05D006152 ORTHO05D008137 4.6e-41 172.2 222 44.1
Cpa.g.sc46.115 Carica papaya HOM05D006152 ORTHO05D008137 1.7e-40 170.2 223 44.8
Thhalv10014084m.g Eutrema salsugineum HOM05D006152 ORTHO05D008137 5.0e-40 168.7 226 44.7
CDE05G0292 Ceratophyllum demersum HOM05D006152 ORTHO05D008137 6.6e-40 168.3 222 43.2
Lsat_1_v5_gn_5_90820 Lactuca sativa HOM05D006152 ORTHO05D008137 6.6e-40 168.3 222 47.3
AUR62017200 Chenopodium quinoa HOM05D006152 ORTHO05D008137 1.1e-39 167.5 218 44.5
MELO3C004453.2 Cucumis melo HOM05D006152 ORTHO05D008137 1.1e-39 167.5 225 45.3
Hma1.2p1_0222F.1_g093200 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 1.5e-39 167.2 165 55.8
unitig_899.g15450 Utricularia gibba HOM05D006152 ORTHO05D003911 1.9e-39 166.8 218 45.0
SalBow1G4451 Salvia bowleyana HOM05D001472 ORTHO05D002655 3.3e-39 166.0 219 44.7
Sp6g19860 Schrenkiella parvula HOM05D006152 ORTHO05D008137 7.3e-39 164.9 225 44.0
ATR0184G013 Amborella trichopoda HOM05D006152 ORTHO05D008137 1.2e-38 164.1 220 42.7
CARHR272000 Cardamine hirsuta HOM05D006152 ORTHO05D008137 1.2e-38 164.1 220 45.0
AL8G34300 Arabidopsis lyrata HOM05D006152 ORTHO05D008137 1.6e-38 163.7 220 45.5
A02p07870 Brassica napus HOM05D006152 ORTHO05D008137 6.2e-38 161.8 220 43.6
BraA02t05860Z Brassica rapa HOM05D006152 ORTHO05D008137 6.2e-38 161.8 220 43.6
Hund21620 Selenicereus undatus HOM05D006152 ORTHO05D008137 8.1e-38 161.4 218 44.5
Carub.0008s1874 Capsella rubella HOM05D006152 ORTHO05D008137 1.4e-37 160.6 220 45.5
Os06g0182400 Oryza sativa ssp. japonica HOM05D006152 ORTHO05D008137 4.0e-37 159.1 224 42.9
AT5G58200 Arabidopsis thaliana HOM05D006152 ORTHO05D008137 5.2e-37 158.7 220 45.0
BcaC03g14112 Brassica carinata HOM05D006152 ORTHO05D008137 1.2e-36 157.5 220 42.7
BcaB05g22408 Brassica carinata HOM05D006152 ORTHO05D008137 1.5e-36 157.1 220 42.3
C02p13510 Brassica napus HOM05D006152 ORTHO05D008137 2.0e-36 156.8 220 42.7
BolC2t07463H Brassica oleracea HOM05D006152 ORTHO05D008137 2.0e-36 156.8 220 42.7
FAN28G1911 Fragaria x ananassa HOM05D006152 ORTHO05D008137 3.4e-36 156.0 185 48.6
THA.LOC104811841 Tarenaya hassleriana HOM05D006152 ORTHO05D008137 6.4e-35 151.8 227 41.4
SEGI_04227 Sequoiadendron giganteum HOM05D006152 ORTHO05D008137 1.1e-34 151.0 222 41.4
Mapoly0124s0018 Marchantia polymorpha HOM05D006152 ORTHO05D008137 7.1e-34 148.3 230 40.0
AUR62019760 Chenopodium quinoa HOM05D001472 ORTHO05D002655 9.2e-34 147.9 218 43.1
Nitab4.5_0001094g0060 Nicotiana tabacum HOM05D006152 ORTHO05D008137 1.2e-33 147.5 220 40.9
SalBow5G3728 Salvia bowleyana HOM05D001472 ORTHO05D002655 1.6e-33 147.1 196 45.9
AUR62010759 Chenopodium quinoa HOM05D001472 ORTHO05D002655 6.0e-33 145.2 218 42.2
ECA234G4022 Erigeron canadensis HOM05D000464 ORTHO05D000408 2.3e-32 143.3 184 45.7
GSVIVG01001075001 Vitis vinifera HOM05D006152 ORTHO05D008137 8.1e-30 134.8 123 57.7
CARHR032820 Cardamine hirsuta HOM05D006152 ORTHO05D008137 5.8e-28 128.6 192 43.2
AUR62041375 Chenopodium quinoa HOM05D001472 ORTHO05D002655 3.8e-27 125.9 196 41.8
Ah.04g162170 Amaranthus hybridus HOM05D006152 ORTHO05D008137 2.3e-24 116.7 218 36.7
SMO347G0290 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 3.9e-24 115.9 219 35.2
Pp3c26_6540 Physcomitrium patens HOM05D006152 ORTHO05D008137 1.5e-23 114.0 205 35.6
AUR62002687 Chenopodium quinoa HOM05D006152 ORTHO05D008137 4.3e-23 112.5 145 45.5
TAR383G0486 Trochodendron aralioides HOM05D006152 ORTHO05D008137 9.6e-23 111.3 102 57.8
AagrBONN_evm.TU.Sc2ySwM_228.5740 Anthoceros agrestis HOM05D006152 ORTHO05D008137 1.4e-21 107.5 215 34.9
SMO356G0422 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 4.0e-21 105.9 214 32.7
SMO169G0164 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 4.4e-20 102.4 204 34.8
Dinv42894 Davidia involucrata HOM05D006152 ORTHO05D008137 7.8e-17 91.7 55 72.7
Migut.K01256 Erythranthe guttata HOM05D006152 ORTHO05D008137 1.7e-16 90.5 128 42.2
MD00G1188400 Malus domestica HOM05D006152 ORTHO05D008137 6.6e-16 88.6 55 70.9
Potri.018G111500 Populus trichocarpa HOM05D006152 ORTHO05D008137 2.5e-15 86.7 87 52.9
TAR383G0013 Trochodendron aralioides HOM05D006152 ORTHO05D008137 4.3e-15 85.9 55 69.1
Cre17.g729650 Chlamydomonas reinhardtii HOM05D006152 ORTHO05D008137 6.9e-13 78.6 162 34.0
Oeu028814.1 Olea europaea HOM05D006152 ORTHO05D008137 1.7e-11 73.9 51 64.7
Medtr4g015670 Medicago truncatula HOM05D006152 ORTHO05D008137 1.2e-09 67.8 71 54.9
Sc08g0005240 Simmondsia chinensis HOM05D006152 ORTHO05D008137 1.3e-08 64.3 97 43.3
Sc04g0006660 Simmondsia chinensis HOM05D006152 ORTHO05D008137 5.1e-08 62.4 123 34.1


User provided reference genes

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