Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.7e-210 735.7 368 100.0
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.7e-210 735.7 368 100.0
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.2e-190 669.8 368 91.6
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 3.4e-190 668.3 368 90.2
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 3.6e-176 621.7 368 84.0
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 4.7e-176 621.3 365 83.0
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 6.8e-175 617.5 368 83.2
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 8.9e-175 617.1 368 83.7
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 7.5e-174 614.0 368 82.1
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 4.6e-171 604.7 339 90.0
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 4.9e-165 584.7 369 80.5
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 4.6e-163 578.2 368 78.8
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 3.6e-160 568.5 363 76.6
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.1e-159 567.0 363 75.5
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 6.4e-157 557.8 363 74.9
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 1.1e-156 557.0 366 76.0
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 2.1e-155 552.7 370 75.9
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 2.1e-155 552.7 363 74.9
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.0e-154 550.4 368 74.5
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 1.1e-153 547.0 367 72.8
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 5.6e-153 544.7 368 74.5
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 4.7e-152 541.6 368 72.8
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 2.4e-151 539.3 368 72.8
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.5e-150 536.6 368 72.3
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 2.0e-150 536.2 366 73.0
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 5.8e-150 534.6 369 72.6
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 7.6e-150 534.3 368 71.5
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 2.9e-149 532.3 368 71.5
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 3.8e-149 531.9 369 72.9
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 8.4e-149 530.8 366 71.6
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.4e-148 530.0 366 70.8
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 2.4e-148 529.3 369 72.1
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 5.4e-148 528.1 368 72.3
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 7.1e-148 527.7 365 72.6
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.6e-147 526.6 371 70.9
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.6e-147 526.6 370 72.4
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 4.6e-147 525.0 368 71.2
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 6.0e-147 524.6 368 71.5
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.0e-146 523.9 366 68.9
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 1.0e-146 523.9 368 71.7
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 1.3e-146 523.5 368 71.5
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 1.7e-146 523.1 369 71.5
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 1.1e-145 520.4 368 71.7
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 1.5e-145 520.0 365 71.0
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.5e-145 520.0 368 69.8
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.6e-144 516.5 371 69.3
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 8.1e-144 514.2 368 67.9
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 5.3e-143 511.5 368 69.0
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 6.9e-143 511.1 368 69.0
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.5e-142 510.0 362 69.9
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.5e-142 510.0 370 68.6
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 2.6e-142 509.2 368 66.8
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 3.4e-142 508.8 374 68.2
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.3e-141 506.9 369 68.8
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 4.9e-141 505.0 355 68.5
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.1e-140 501.1 346 71.4
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 7.1e-140 501.1 385 67.0
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 3.5e-139 498.8 365 67.9
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 7.9e-139 497.7 368 66.8
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 8.7e-138 494.2 359 67.7
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 1.9e-137 493.0 362 68.0
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.5e-137 492.7 334 74.0
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 3.3e-137 492.3 350 70.6
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 7.4e-137 491.1 385 65.5
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.1e-136 489.6 359 66.3
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.8e-136 489.2 367 67.3
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 3.7e-136 488.8 362 66.6
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 6.2e-136 488.0 360 67.2
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 8.1e-136 487.6 364 66.2
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 8.1e-136 487.6 362 66.6
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.8e-135 486.5 362 67.1
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 2.4e-135 486.1 364 65.1
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 2.4e-135 486.1 366 66.4
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 4.0e-135 485.3 368 65.8
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 5.3e-135 485.0 362 65.5
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 9.0e-135 484.2 343 71.4
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 1.2e-134 483.8 362 65.2
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.5e-134 483.4 368 65.5
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 2.0e-134 483.0 368 65.5
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 7.6e-134 481.1 364 65.9
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.7e-133 479.9 356 66.6
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 4.9e-133 478.4 362 66.6
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.9e-132 476.5 368 68.2
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.9e-132 476.5 376 64.4
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 2.4e-132 476.1 443 58.0
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.6e-131 473.4 362 64.6
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 7.9e-131 471.1 374 63.1
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.0e-130 470.7 343 69.7
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.3e-130 469.5 319 73.7
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 2.3e-130 469.5 412 60.7
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 5.1e-130 468.4 365 66.6
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.4e-127 459.5 365 61.4
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 2.0e-126 456.4 341 66.0
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 2.6e-126 456.1 328 68.0
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 4.5e-126 455.3 367 61.0
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.1e-124 450.7 429 57.6
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 4.2e-124 448.7 364 60.4
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 6.3e-120 434.9 354 62.1
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 1.0e-117 427.6 317 67.2
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 5.0e-117 425.2 291 72.9
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 7.9e-115 417.9 293 71.3
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 7.4e-113 411.4 292 69.2
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 1.1e-111 407.5 278 72.3
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 1.4e-108 397.1 278 73.4
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 2.0e-105 386.7 361 57.1
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 9.7e-105 384.4 315 67.0
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.4e-103 380.6 364 54.7
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 1.8e-103 380.2 317 58.7
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 1.8e-98 363.6 354 53.4
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 3.9e-98 362.5 329 60.5
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 1.7e-96 357.1 270 65.2
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 2.8e-96 356.3 263 66.5
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 2.1e-91 340.1 272 62.1
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.0e-85 321.2 362 48.6
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 4.8e-80 302.4 316 49.7
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 2.4e-71 273.5 455 38.7
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 6.6e-69 265.4 370 46.8
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 6.1e-67 258.8 177 75.7
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 9.8e-65 251.5 248 57.3
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 5.0e-61 239.2 242 57.9
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 6.8e-58 228.8 365 39.5
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.6e-57 226.9 212 60.8
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 5.4e-55 219.2 182 65.9
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 9.2e-55 218.4 360 38.9
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 7.8e-54 215.3 182 64.8
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.5e-52 211.1 246 52.8
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 6.0e-38 162.5 113 67.3
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 8.1e-27 125.6 107 59.8
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 7.9e-22 109.0 208 38.5
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 6.9e-18 95.9 63 68.3
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.3e-16 91.7 63 66.7
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 7.1e-15 85.9 49 81.6
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 1.5e-09 68.2 192 28.1
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 1.3e-08 65.1 33 90.9
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 3.8e-08 63.5 88 43.2


User provided reference genes

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