Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21085_v3 Cicer arietinum L. HOM05D007941 ORTHO05D010050 0.0e+00 1221.1 631 100.0
TPR.G37125 Trifolium pratense HOM05D007941 ORTHO05D010050 1.3e-229 800.0 794 61.3
Glyma.17G013700 Glycine max HOM05D007941 ORTHO05D010050 2.1e-216 756.1 706 62.6
Phvul.003G078500 Phaseolus vulgaris HOM05D007941 ORTHO05D010050 7.5e-214 747.7 707 62.4
Lj4g0020812 Lotus japonicus HOM05D007941 ORTHO05D010050 4.7e-208 728.4 685 62.0
VMungo1215G2837 Vigna mungo HOM05D007941 ORTHO05D010050 1.4e-199 700.3 699 59.4
Cfa000224 Carpinus fangiana HOM05D007941 ORTHO05D010050 2.6e-166 589.7 709 51.2
Haze_06797 Corylus avellana HOM05D007941 ORTHO05D010050 5.8e-166 588.6 710 51.5
arahy.Tifrunner.gnm1.ann1.CCWF18 Arachis hypogaea HOM05D007941 ORTHO05D010050 1.4e-164 583.9 650 53.8
arahy.Tifrunner.gnm1.ann1.N60BY5 Arachis hypogaea HOM05D007941 ORTHO05D010050 1.7e-162 577.0 666 52.6
QL05p073215 Quercus lobata HOM05D007941 ORTHO05D010050 8.1e-160 568.2 712 49.6
COL.COLO4_31770 Corchorus olitorius HOM05D007941 ORTHO05D010050 3.5e-155 552.7 678 49.1
Thecc.06G220000 Theobroma cacao HOM05D007941 ORTHO05D010050 3.5e-155 552.7 719 47.7
Prupe.4G021200 Prunus persica HOM05D007941 ORTHO05D010050 5.1e-154 548.9 691 49.6
Medtr4g132080 Medicago truncatula HOM05D007941 ORTHO05D010050 7.4e-153 545.0 458 66.6
MD10G1321100 Malus domestica HOM05D007941 ORTHO05D010050 3.8e-149 532.7 701 47.6
Gorai.011G014100 Gossypium raimondii HOM05D007941 ORTHO05D010050 1.4e-148 530.8 679 48.5
RcHm_v2.0_Chr5g0003191 Rosa chinensis HOM05D007941 ORTHO05D010050 1.4e-148 530.8 687 49.1
MD05G1345700 Malus domestica HOM05D007941 ORTHO05D010050 3.2e-148 529.6 710 47.7
Ciclev10017854m.g Citrus clementina HOM05D007941 ORTHO05D010050 4.2e-148 529.3 693 47.9
CANSAT56G1781 Cannabis sativa HOM05D007941 ORTHO05D010050 7.1e-148 528.5 703 49.1
Gohir.D10G012450 Gossypium hirsutum HOM05D007941 ORTHO05D010050 1.2e-147 527.7 676 48.4
FAN25G1443 Fragaria x ananassa HOM05D007941 ORTHO05D010050 7.9e-147 525.0 669 49.6
Atru.chr10.2217 Acer truncatum HOM05D007941 ORTHO05D010050 3.0e-146 523.1 708 46.9
Manes.16G007400 Manihot esculenta HOM05D007941 ORTHO05D010050 8.7e-146 521.5 694 48.1
Potri.004G015401 Populus trichocarpa HOM05D007941 ORTHO05D010050 2.1e-144 516.9 708 47.3
TWI38G0160 Tripterygium wilfordii HOM05D007941 ORTHO05D010050 5.3e-143 512.3 713 46.0
TAR627G0026 Trochodendron aralioides HOM05D007941 ORTHO05D010050 1.0e-141 508.1 727 45.7
Actinidia26916 Actinidia chinensis HOM05D007941 ORTHO05D010050 1.3e-141 507.7 678 47.6
Sabra04G0007600 Salix brachista HOM05D007941 ORTHO05D010050 4.9e-141 505.8 712 46.2
FvH4_3g02100 Fragaria vesca HOM05D007941 ORTHO05D010050 5.5e-140 502.3 667 48.1
Gohir.A10G012680 Gossypium hirsutum HOM05D007941 ORTHO05D010050 2.1e-139 500.4 683 47.3
CsaV3_1G010790 Cucumis sativus L. HOM05D007941 ORTHO05D010050 1.4e-135 487.6 694 46.0
Cpa.g.sc152.13 Carica papaya HOM05D007941 ORTHO05D010050 6.9e-135 485.3 709 44.3
CiPaw.09G091700 Carya illinoinensis HOM05D007941 ORTHO05D010050 2.0e-134 483.8 635 48.7
Nn1g07127 Nelumbo nucifera HOM05D007941 ORTHO05D010050 2.9e-133 479.9 736 43.9
Sed0010816 Sechium edule HOM05D007941 ORTHO05D010050 2.3e-130 470.3 694 42.9
PSO832G2769 Papaver somniferum HOM05D007941 ORTHO05D010050 1.8e-127 460.7 698 44.6
ClCG03G004750 Citrullus lanatus HOM05D007941 ORTHO05D010050 5.3e-127 459.1 705 44.7
Cc09_g01710 Coffea canephora HOM05D007941 ORTHO05D010050 1.4e-124 451.1 715 42.5
MELO3C002458.2 Cucumis melo HOM05D007941 ORTHO05D010050 7.2e-124 448.7 704 42.9
Lj1C1230T3 Lonicera japonica HOM05D007941 ORTHO05D010050 7.9e-123 445.3 551 48.5
Nitab4.5_0012670g0020 Nicotiana tabacum HOM05D007941 ORTHO05D010050 7.0e-119 432.2 642 45.8
Solyc03g031660.1 Solanum lycopersicum HOM05D007941 ORTHO05D010050 4.5e-118 429.5 684 42.7
Sopen03g005520 Solanum pennellii HOM05D007941 ORTHO05D010050 5.5e-116 422.5 687 42.2
GSVIVG01012729001 Vitis vinifera HOM05D007941 ORTHO05D010050 1.1e-111 408.3 424 55.7
CiPaw.09G091500 Carya illinoinensis HOM05D007941 ORTHO05D010050 2.4e-111 407.1 416 56.0
PGR004G0641 Punica granatum HOM05D007941 ORTHO05D010050 1.3e-109 401.4 675 42.4
Peaxi162Scf00502g00214 Petunia axillaris HOM05D007941 ORTHO05D010050 2.6e-105 387.1 685 40.1
AUR62012706 Chenopodium quinoa HOM05D007941 ORTHO05D010050 2.8e-104 383.6 526 45.2
Hma1.2p1_0749F.1_g212520 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 1.8e-103 380.9 207 86.0
Hma1.2p1_0749F.1_g212543 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 1.8e-103 380.9 207 86.0
CDE05G3547 Ceratophyllum demersum HOM05D007941 ORTHO05D010050 4.1e-103 379.8 472 48.3
Dinv13890 Davidia involucrata HOM05D007941 ORTHO05D010050 3.5e-102 376.7 644 41.1
Nitab4.5_0007864g0050 Nicotiana tabacum HOM05D007941 ORTHO05D010050 3.2e-100 370.2 652 41.4
EL10Ac8g20054 Beta vulgaris HOM05D007941 ORTHO05D010050 4.1e-95 353.2 563 42.3
Nn1g03523 Nelumbo nucifera HOM05D007941 ORTHO05D010050 5.9e-94 349.4 372 53.2
Mapoly0124s0009 Marchantia polymorpha HOM05D007941 ORTHO05D010050 1.2e-89 335.1 242 67.4
Pp3c25_7620 Physcomitrium patens HOM05D007941 ORTHO05D010050 1.4e-87 328.2 492 43.1
FAN21G2241 Fragaria x ananassa HOM05D007941 ORTHO05D010050 3.2e-87 327.0 341 54.5
Glyma.07G260250 Glycine max HOM05D007941 ORTHO05D010050 8.9e-66 255.8 358 51.4
MBI02_g07163_MAGBIO Magnolia biondii HOM05D007941 ORTHO05D010050 3.8e-40 170.6 293 42.3
SEGI_08485 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 3.8e-32 144.1 293 38.6
AUR62021949 Chenopodium quinoa HOM05D007941 ORTHO05D010050 1.2e-30 139.0 291 37.1
SEGI_17062 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 1.8e-29 135.2 70 82.9
Medtr4g132090 Medicago truncatula HOM05D007941 ORTHO05D010050 6.7e-29 133.3 182 53.3
Dinv20048 Davidia involucrata HOM05D007941 ORTHO05D010050 1.1e-28 132.5 235 42.1
AUR62021948 Chenopodium quinoa HOM05D007941 ORTHO05D010050 1.8e-26 125.2 252 38.1
SEGI_18097 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 1.4e-23 115.5 85 69.4
ATR0794G083 Amborella trichopoda HOM05D007941 ORTHO05D010050 1.2e-22 112.5 84 67.9
FAN21G0178 Fragaria x ananassa HOM05D007941 ORTHO05D010050 6.7e-21 106.7 180 43.3
ATR0794G095 Amborella trichopoda HOM05D007941 ORTHO05D010050 6.9e-18 96.7 69 71.0
Dinv20049 Davidia involucrata HOM05D007941 ORTHO05D010050 6.5e-16 90.1 202 34.2
Nn1g03524 Nelumbo nucifera HOM05D007941 ORTHO05D010050 2.6e-09 68.2 113 50.4


User provided reference genes

Program Settings