Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 1.3e-137 493.0 247 100.0
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 2.1e-95 352.8 191 90.1
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.8e-94 349.7 193 89.1
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.8e-94 349.7 193 89.1
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.8e-94 349.7 191 89.5
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 3.4e-93 345.5 191 88.5
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 5.7e-93 344.7 190 88.9
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 5.7e-93 344.7 190 89.5
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 3.7e-92 342.0 190 87.9
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 8.3e-92 340.9 190 88.4
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.2e-90 337.0 190 87.9
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 2.0e-90 336.3 191 87.4
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 5.5e-88 328.2 190 84.2
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 7.2e-88 327.8 190 83.2
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 8.8e-86 320.9 190 82.1
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.2e-85 320.5 192 81.2
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 2.6e-85 319.3 190 81.1
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 4.4e-85 318.5 190 80.0
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 7.5e-85 317.8 190 81.1
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 7.5e-85 317.8 190 79.5
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 9.8e-85 317.4 190 81.1
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 1.3e-84 317.0 190 81.1
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.3e-84 317.0 182 84.1
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 1.3e-84 317.0 190 80.0
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 2.8e-84 315.8 190 80.0
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 3.7e-84 315.5 190 82.1
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 6.3e-84 314.7 191 81.2
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 8.3e-84 314.3 182 83.0
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 1.1e-83 313.9 190 80.0
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.4e-83 313.5 182 83.0
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.4e-83 313.5 191 79.1
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.8e-83 313.2 198 78.3
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 2.4e-83 312.8 190 79.5
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 3.1e-83 312.4 190 78.9
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 3.1e-83 312.4 190 80.0
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 3.1e-83 312.4 190 78.9
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 3.1e-83 312.4 182 83.0
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 4.1e-83 312.0 191 79.1
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 7.0e-83 311.2 205 76.1
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 7.0e-83 311.2 205 76.1
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.6e-82 310.1 188 80.3
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 3.5e-82 308.9 190 78.9
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 4.5e-82 308.5 190 80.5
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 7.7e-82 307.8 190 79.5
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.0e-81 307.4 205 75.1
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 1.0e-81 307.4 190 78.9
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.3e-81 307.0 194 77.8
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 2.3e-81 306.2 191 78.0
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 2.3e-81 306.2 213 73.7
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 5.0e-81 305.1 189 79.4
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 6.6e-81 304.7 194 77.3
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 6.6e-81 304.7 222 71.6
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 6.6e-81 304.7 190 79.5
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 6.6e-81 304.7 182 79.1
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 8.6e-81 304.3 189 76.7
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 1.1e-80 303.9 191 77.0
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.9e-80 303.1 190 76.3
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 2.5e-80 302.8 190 76.3
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 2.5e-80 302.8 190 76.3
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 3.3e-80 302.4 190 78.4
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 3.3e-80 302.4 191 75.9
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 3.3e-80 302.4 190 76.3
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 5.5e-80 301.6 192 76.0
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 7.2e-80 301.2 190 75.8
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 9.5e-80 300.8 219 71.7
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 2.8e-79 299.3 190 77.9
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 3.6e-79 298.9 179 79.3
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 4.7e-79 298.5 190 75.8
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 4.7e-79 298.5 194 73.2
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.8e-78 296.6 190 75.3
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.8e-78 296.6 190 75.3
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 1.2e-77 293.9 190 74.7
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.5e-77 293.5 181 77.9
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 7.5e-77 291.2 185 76.2
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.7e-76 290.0 183 75.4
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 4.9e-76 288.5 190 76.3
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 1.4e-75 287.0 190 71.6
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 1.8e-75 286.6 194 72.7
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 3.2e-75 285.8 189 73.5
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 3.5e-74 282.3 187 73.8
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 7.8e-74 281.2 190 72.1
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.0e-73 280.8 187 73.3
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 3.3e-72 275.8 187 71.7
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 3.3e-72 275.8 187 71.7
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 9.5e-72 274.2 190 71.1
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 1.2e-71 273.9 183 73.2
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 1.2e-71 273.9 183 73.2
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 1.2e-71 273.9 183 73.2
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 2.8e-71 272.7 183 72.7
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.8e-71 272.7 183 73.2
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 6.1e-71 271.6 183 72.1
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 8.0e-71 271.2 199 64.8
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 4.4e-69 265.4 154 82.5
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 7.5e-69 264.6 182 70.9
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 7.5e-69 264.6 182 70.9
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.3e-68 263.8 181 71.8
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 6.4e-68 261.5 188 70.2
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 1.9e-64 250.0 160 74.4
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 3.1e-62 242.7 159 73.6
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 8.3e-60 234.6 183 61.7
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 4.4e-53 212.2 183 56.3
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 8.9e-46 188.0 111 81.1
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.6e-45 186.4 132 67.4
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.3e-44 184.1 182 50.0
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 6.6e-41 171.8 96 83.3
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.3e-36 157.5 95 83.2
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 8.7e-25 118.2 83 68.7
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 2.8e-23 113.2 159 44.7
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 4.9e-20 102.4 88 59.1
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.9e-16 90.5 62 71.0
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 2.6e-13 80.1 91 41.8
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 7.9e-10 68.6 89 43.8
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 7.4e-08 62.0 161 29.2
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 9.0e-06 55.1 34 73.5


User provided reference genes

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