Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21060_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 3.7e-115 418.3 227 100.0
Lj2P264T22 Lonicera japonica HOM05D004496 ORTHO05D005513 8.0e-33 144.8 282 39.7
VMungo1215G0904 Vigna mungo HOM05D004496 ORTHO05D005513 1.8e-32 143.7 288 39.6
Phvul.003G081900 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 4.0e-32 142.5 283 41.0
Ciclev10015792m.g Citrus clementina HOM05D004496 ORTHO05D005513 8.3e-30 134.8 217 42.9
GSVIVG01004818001 Vitis vinifera HOM05D004496 ORTHO05D005513 8.3e-30 134.8 196 45.9
Glyma.07G263700 Glycine max HOM05D004496 ORTHO05D005513 1.4e-29 134.0 270 46.3
Glyma.15G112200 Glycine max HOM05D004496 ORTHO05D005513 7.0e-29 131.7 232 44.4
Phvul.006G145400 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 1.6e-28 130.6 312 38.5
TAR626G0621 Trochodendron aralioides HOM05D004496 ORTHO05D005513 1.7e-27 127.1 230 40.4
MELO3C007420.2 Cucumis melo HOM05D004496 ORTHO05D005513 8.5e-27 124.8 203 49.8
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 8.5e-27 124.8 254 38.6
Lalb_Chr18g0056781 Lupinus albus HOM05D004496 ORTHO05D005513 1.5e-26 124.0 300 38.7
TAR627G0164 Trochodendron aralioides HOM05D004496 ORTHO05D005513 1.9e-26 123.6 247 41.3
TAR627G0966 Trochodendron aralioides HOM05D004496 ORTHO05D005513 4.2e-26 122.5 247 42.1
Nitab4.5_0006125g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 5.5e-26 122.1 224 41.1
Nitab4.5_0009517g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 5.5e-26 122.1 271 37.6
Sed0021394 Sechium edule HOM05D004496 ORTHO05D005513 7.2e-26 121.7 199 44.7
TAR624G0763 Trochodendron aralioides HOM05D001218 ORTHO05D003142 9.4e-26 121.3 248 38.7
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 2.1e-25 120.2 178 44.9
Dinv13941 Davidia involucrata HOM05D004496 ORTHO05D005513 2.1e-25 120.2 269 37.2
FAN25G1366 Fragaria x ananassa HOM05D004496 ORTHO05D005513 3.6e-25 119.4 199 41.7
MD10G1327300 Malus domestica HOM05D004496 ORTHO05D005513 1.4e-24 117.5 252 37.7
CsaV3_6G048690 Cucumis sativus L. HOM05D004496 ORTHO05D005513 3.0e-24 116.3 209 47.8
Psat1g175480 Pisum sativum HOM05D004496 ORTHO05D005513 5.2e-24 115.5 310 38.1
Gohir.D05G176300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 1.2e-23 114.4 243 35.8
Duzib192G0344 Durio zibethinus HOM05D004496 ORTHO05D005513 2.6e-23 113.2 248 37.1
Gohir.A05G173300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 2.6e-23 113.2 245 38.8
CiPaw.09G098400 Carya illinoinensis HOM05D004496 ORTHO05D005513 3.4e-23 112.8 261 36.8
Ca_00696_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 3.4e-23 112.8 318 36.2
Thhalv10028862m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 3.4e-23 112.8 190 40.5
Lalb_Chr15g0087811 Lupinus albus HOM05D004496 ORTHO05D005513 3.4e-23 112.8 207 40.6
Peaxi162Scf00294g00097 Petunia axillaris HOM05D004496 ORTHO05D005513 7.5e-23 111.7 231 38.5
ClCG01G021640 Citrullus lanatus HOM05D004496 ORTHO05D005513 9.8e-23 111.3 209 40.7
Medtr2g024980 Medicago truncatula HOM05D004496 ORTHO05D005513 9.8e-23 111.3 329 34.3
CAN.G1014.49 Capsicum annuum HOM05D004496 ORTHO05D005513 2.2e-22 110.2 220 39.1
CiPaw.10G074800 Carya illinoinensis HOM05D004496 ORTHO05D005513 2.2e-22 110.2 220 39.5
Aqoxy1G03511 Aquilegia oxysepala HOM05D004496 ORTHO05D005513 2.8e-22 109.8 230 37.0
Solyc02g081150.1 Solanum lycopersicum HOM05D004496 ORTHO05D005513 2.8e-22 109.8 237 39.7
Sopen02g025790 Solanum pennellii HOM05D004496 ORTHO05D005513 2.8e-22 109.8 218 41.3
TWI38G0464 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 2.8e-22 109.8 248 37.1
MSTRG.13128 Avicennia marina HOM05D004496 ORTHO05D005513 4.9e-22 109.0 214 38.8
Migut.M01368 Erythranthe guttata HOM05D004496 ORTHO05D005513 4.9e-22 109.0 253 36.0
Gorai.009G181700 Gossypium raimondii HOM05D004496 ORTHO05D005513 6.3e-22 108.6 228 39.0
FvH4_3g01370 Fragaria vesca HOM05D004496 ORTHO05D005513 8.3e-22 108.2 196 39.8
Glyma.09G007852 Glycine max HOM05D004496 ORTHO05D005513 8.3e-22 108.2 238 39.1
Nitab4.5_0005882g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.1e-21 107.8 190 43.7
Medtr4g132690 Medicago truncatula HOM05D004496 ORTHO05D005513 1.4e-21 107.5 268 42.2
SalBow8G1688 Salvia bowleyana HOM05D004496 ORTHO05D005513 1.4e-21 107.5 180 42.2
PGSC0003DMG400016725 Solanum tuberosum HOM05D004496 ORTHO05D005513 1.8e-21 107.1 230 39.1
Atru.chr10.2286 Acer truncatum HOM05D004496 ORTHO05D005513 2.4e-21 106.7 245 38.0
CSS0046352 Camellia sinensis var. sinensis HOM05D004496 ORTHO05D005513 2.4e-21 106.7 193 42.5
MSTRG.7183 Avicennia marina HOM05D004496 ORTHO05D005513 3.1e-21 106.3 220 38.6
Nn1g03388 Nelumbo nucifera HOM05D004496 ORTHO05D005513 3.1e-21 106.3 254 35.4
Manes.17G027100 Manihot esculenta HOM05D004496 ORTHO05D005513 7.0e-21 105.1 239 39.3
Sed0016463 Sechium edule HOM05D004496 ORTHO05D005513 9.1e-21 104.8 189 46.0
C07p51660 Brassica napus HOM05D004496 ORTHO05D005513 1.2e-20 104.4 261 36.8
Thhalv10025698m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 1.6e-20 104.0 213 37.1
BcaNung00807 Brassica carinata HOM05D004496 ORTHO05D005513 2.7e-20 103.2 247 37.2
Nitab4.5_0000005g0040 Nicotiana tabacum HOM05D004496 ORTHO05D005513 2.7e-20 103.2 191 42.9
Lj6g0013804 Lotus japonicus HOM05D004496 ORTHO05D005513 3.5e-20 102.8 212 38.2
Sabra11G0008600 Salix brachista HOM05D004496 ORTHO05D005513 3.5e-20 102.8 249 35.7
Sabra11G0010200 Salix brachista HOM05D004496 ORTHO05D005513 3.5e-20 102.8 218 37.2
Duzib235G0420 Durio zibethinus HOM05D004496 ORTHO05D005513 4.5e-20 102.4 245 34.7
TPR.G37047 Trifolium pratense HOM05D004496 ORTHO05D005513 4.5e-20 102.4 180 50.0
Sp7g20330 Schrenkiella parvula HOM05D004496 ORTHO05D005513 5.9e-20 102.1 211 37.0
Lj4g0028181 Lotus japonicus HOM05D004496 ORTHO05D005513 7.7e-20 101.7 302 37.1
MD05G1352700 Malus domestica HOM05D004496 ORTHO05D005513 7.7e-20 101.7 213 41.3
Prupe.4G014700 Prunus persica HOM05D004496 ORTHO05D005513 1.0e-19 101.3 244 39.3
Sabra11G0011700 Salix brachista HOM05D004496 ORTHO05D005513 1.0e-19 101.3 249 39.0
Migut.H01591 Erythranthe guttata HOM05D004496 ORTHO05D005513 1.3e-19 100.9 201 38.8
Manes.16G002700 Manihot esculenta HOM05D004496 ORTHO05D005513 1.3e-19 100.9 216 37.5
CARHR229080 Cardamine hirsuta HOM05D004496 ORTHO05D005513 2.3e-19 100.1 207 37.2
Carub.0007s1912 Capsella rubella HOM05D004496 ORTHO05D005513 3.8e-19 99.4 211 38.4
CDE04G1983 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 3.8e-19 99.4 189 38.6
Nn1g07279 Nelumbo nucifera HOM05D004496 ORTHO05D005513 5.0e-19 99.0 261 33.7
BcaNung03756 Brassica carinata HOM05D004496 ORTHO05D005513 6.6e-19 98.6 239 35.1
RcHm_v2.0_Chr5g0001991 Rosa chinensis HOM05D004496 ORTHO05D005513 6.6e-19 98.6 206 37.9
PGR004G2243 Punica granatum HOM05D004496 ORTHO05D005513 1.1e-18 97.8 248 40.7
Sc17g0007590 Simmondsia chinensis HOM05D004496 ORTHO05D005513 1.1e-18 97.8 252 36.1
arahy.Tifrunner.gnm1.ann1.SI7QTZ Arachis hypogaea HOM05D004496 ORTHO05D005513 1.5e-18 97.4 252 34.5
PSO210G3984 Papaver somniferum HOM05D004496 ORTHO05D005513 1.9e-18 97.1 236 34.7
PSO832G0430 Papaver somniferum HOM05D004496 ORTHO05D005513 1.9e-18 97.1 245 35.1
vmacro03662 Vaccinium macrocarpon HOM05D004496 ORTHO05D005513 1.9e-18 97.1 209 35.9
Thecc.06G228600 Theobroma cacao HOM05D004496 ORTHO05D005513 3.3e-18 96.3 237 34.2
arahy.Tifrunner.gnm1.ann1.EH65IB Arachis hypogaea HOM05D004496 ORTHO05D005513 4.3e-18 95.9 324 31.8
EL10Ac8g20132 Beta vulgaris HOM05D004496 ORTHO05D005513 5.6e-18 95.5 207 38.6
BcaNung01704 Brassica carinata HOM05D004496 ORTHO05D005513 7.2e-18 95.1 211 37.0
A01p13560 Brassica napus HOM05D004496 ORTHO05D005513 9.5e-18 94.7 216 36.1
BraA01t01298Z Brassica rapa HOM05D004496 ORTHO05D005513 9.5e-18 94.7 216 36.1
Peaxi162Scf00708g00013 Petunia axillaris HOM05D004496 ORTHO05D005513 1.2e-17 94.4 211 36.0
Rhsim13G0149900 Rhododendron simsii HOM05D004496 ORTHO05D005513 1.2e-17 94.4 206 36.9
Potri.006G270100 Populus trichocarpa HOM05D004496 ORTHO05D005513 2.8e-17 93.2 189 40.7
Potri.011G015500 Populus trichocarpa HOM05D004496 ORTHO05D005513 3.6e-17 92.8 218 36.7
AL7G31460 Arabidopsis lyrata HOM05D004496 ORTHO05D005513 6.1e-17 92.0 209 36.8
Lsat_1_v5_gn_7_14880 Lactuca sativa HOM05D004496 ORTHO05D005513 8.0e-17 91.7 232 34.1
BcaC09g51153 Brassica carinata HOM05D004496 ORTHO05D005513 1.4e-16 90.9 220 35.0
A03p53360 Brassica napus HOM05D004496 ORTHO05D005513 1.4e-16 90.9 243 33.7
C01p16430 Brassica napus HOM05D004496 ORTHO05D005513 1.4e-16 90.9 220 35.0
BolC1t01593H Brassica oleracea HOM05D004496 ORTHO05D005513 1.4e-16 90.9 220 35.0
Psat4g004280 Pisum sativum HOM05D004496 ORTHO05D005513 1.4e-16 90.9 248 37.9
THA.LOC104806318 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 1.8e-16 90.5 219 34.2
CANSAT56G2524 Cannabis sativa HOM05D004496 ORTHO05D005513 2.3e-16 90.1 221 33.5
HanXRQChr15g0470781 Helianthus annuus HOM05D004496 ORTHO05D005513 2.3e-16 90.1 187 37.4
unitig_26.g9398 Utricularia gibba HOM05D004496 ORTHO05D005513 2.3e-16 90.1 179 48.0
ECA236G1118 Erigeron canadensis HOM05D004496 ORTHO05D005513 3.0e-16 89.7 176 39.8
Sabra04G0002100 Salix brachista HOM05D004496 ORTHO05D005513 3.0e-16 89.7 185 39.5
Aa31LG6G4310 Aethionema arabicum HOM05D004496 ORTHO05D005513 4.0e-16 89.4 213 37.1
THA.LOC104812981 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 5.2e-16 89.0 230 34.3
PGR042G2934 Punica granatum HOM05D004496 ORTHO05D005513 8.9e-16 88.2 270 34.1
THA.LOC104813445 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 8.9e-16 88.2 210 35.7
DCAR_002205 Daucus carota HOM05D004496 ORTHO05D005513 1.5e-15 87.4 178 43.8
Ah.09g234500 Amaranthus hybridus HOM05D004496 ORTHO05D005950 2.0e-15 87.0 237 36.7
HPP92_023384 Vanilla planifolia HOM05D004496 ORTHO05D005513 2.6e-15 86.7 254 33.1
QL05p071740 Quercus lobata HOM05D004496 ORTHO05D005513 3.4e-15 86.3 271 34.3
TWI38G0680 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 3.4e-15 86.3 221 38.5
Hma1.2p1_0298F.1_g117440 Hydrangea macrophylla HOM05D004496 ORTHO05D005513 4.4e-15 85.9 228 32.5
Potri.004G003900 Populus trichocarpa HOM05D004496 ORTHO05D005513 4.4e-15 85.9 189 38.1
Gohir.A06G151400 Gossypium hirsutum HOM05D004496 ORTHO05D005513 1.3e-14 84.3 219 34.7
Cpa.g.sc3209.1 Carica papaya HOM05D004496 ORTHO05D005513 2.2e-14 83.6 207 36.7
MBI19_g19808_MAGBIO Magnolia biondii HOM05D004496 ORTHO05D005513 6.4e-14 82.0 257 30.0
Oeu007154.1 Olea europaea HOM05D004496 ORTHO05D005513 1.4e-13 80.9 221 35.7
Sp6g04650 Schrenkiella parvula HOM05D004496 ORTHO05D005513 1.4e-13 80.9 192 33.9
TWI63G1509 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 2.4e-13 80.1 265 35.1
Actinidia26886 Actinidia chinensis HOM05D004496 ORTHO05D005513 7.0e-13 78.6 234 29.9
CDE07G1551 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 1.2e-12 77.8 159 38.4
BcaNung03755 Brassica carinata HOM05D004496 ORTHO05D005513 4.6e-12 75.9 129 44.2
Gohir.D06G157600 Gossypium hirsutum HOM05D004496 ORTHO05D005513 5.9e-12 75.5 226 32.3
AT4G22190 Arabidopsis thaliana HOM05D004496 ORTHO05D005513 1.3e-11 74.3 209 37.8
Lsat_1_v5_gn_4_61701 Lactuca sativa HOM05D004496 ORTHO05D005513 1.7e-11 73.9 224 33.9
Gorai.010G184200 Gossypium raimondii HOM05D004496 ORTHO05D005513 3.0e-11 73.2 226 31.9
Nn1g01506 Nelumbo nucifera HOM05D004496 ORTHO05D005513 3.0e-11 73.2 106 43.4
Haze_06861 Corylus avellana HOM05D004496 ORTHO05D005513 3.9e-11 72.8 260 29.2
Actinidia02342 Actinidia chinensis HOM05D004496 ORTHO05D005513 1.9e-10 70.5 253 28.9
COL.COLO4_31834 Corchorus olitorius HOM05D004496 ORTHO05D005513 1.2e-09 67.8 96 45.8
Cfa000158 Carpinus fangiana HOM05D004496 ORTHO05D005513 1.6e-09 67.4 283 28.3
unitig_749.g13622 Utricularia gibba HOM05D004496 ORTHO05D005513 8.0e-09 65.1 192 31.8
Oeu003154.1 Olea europaea HOM05D004496 ORTHO05D005513 1.4e-08 64.3 222 31.5
Potri.006G282000 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.4e-08 64.3 192 32.3
Potri.006G282500 Populus trichocarpa HOM05D004496 ORTHO05D005513 2.3e-08 63.5 191 31.9
Nn2g15240 Nelumbo nucifera HOM05D004496 ORTHO05D005513 2.6e-07 60.1 224 28.1
ATR0059G030 Amborella trichopoda HOM05D004496 ORTHO05D005513 1.7e-06 57.4 260 28.5
SGA_v2.0_scaffold89G27486 Striga asiatica HOM05D004496 ORTHO05D005513 1.7e-06 57.4 244 32.0


User provided reference genes

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