Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 3.6e-49 198.0 103 100.0
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.0e-44 182.2 103 87.4
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 4.6e-44 181.0 103 89.3
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 2.8e-41 171.8 104 85.6
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 6.2e-41 170.6 101 82.2
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 8.0e-41 170.2 101 80.2
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.4e-40 169.5 101 79.2
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 6.8e-40 167.2 100 81.0
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 3.7e-38 161.4 103 73.8
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 8.3e-38 160.2 101 75.2
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 1.9e-37 159.1 100 74.0
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 2.4e-37 158.7 101 74.3
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 2.4e-37 158.7 101 75.2
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 3.2e-37 158.3 100 81.0
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 4.1e-37 157.9 101 74.3
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 5.4e-37 157.5 101 77.2
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 9.2e-37 156.8 101 73.3
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 1.2e-36 156.4 101 73.3
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 1.6e-36 156.0 100 76.0
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 2.1e-36 155.6 101 75.2
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 2.1e-36 155.6 100 75.0
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.7e-36 155.2 100 77.0
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 2.7e-36 155.2 100 72.0
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 2.7e-36 155.2 104 71.2
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 3.5e-36 154.8 100 70.0
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 4.6e-36 154.5 100 75.0
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 6.0e-36 154.1 100 75.0
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 6.0e-36 154.1 100 76.0
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.0e-35 153.3 101 75.2
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 1.0e-35 153.3 102 73.5
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.0e-35 153.3 100 75.0
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.0e-35 153.3 99 74.7
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.3e-35 152.9 99 75.8
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.3e-35 152.9 99 75.8
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.3e-35 152.9 100 74.0
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 1.7e-35 152.5 101 74.3
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.7e-35 152.5 101 72.3
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 1.7e-35 152.5 101 72.3
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.7e-35 152.5 101 67.3
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 2.3e-35 152.1 99 74.7
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 2.3e-35 152.1 99 74.7
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 3.0e-35 151.8 101 74.3
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 3.9e-35 151.4 101 76.2
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 3.9e-35 151.4 101 76.2
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 3.9e-35 151.4 104 74.0
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 5.1e-35 151.0 99 72.7
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 5.1e-35 151.0 101 70.3
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 5.1e-35 151.0 100 72.0
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 5.1e-35 151.0 100 72.0
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 5.1e-35 151.0 101 72.3
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 5.1e-35 151.0 101 74.3
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 6.6e-35 150.6 100 73.0
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 6.6e-35 150.6 100 73.0
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 6.6e-35 150.6 101 72.3
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 6.6e-35 150.6 100 72.0
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 8.6e-35 150.2 101 73.3
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 8.6e-35 150.2 101 73.3
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 8.6e-35 150.2 101 73.3
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 8.6e-35 150.2 102 72.5
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 8.6e-35 150.2 101 70.3
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 8.6e-35 150.2 100 71.0
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 8.6e-35 150.2 101 72.3
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.5e-34 149.4 100 74.0
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.9e-34 149.1 100 68.0
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.9e-34 149.1 101 69.3
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 3.3e-34 148.3 104 69.2
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 9.5e-34 146.7 94 72.3
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 9.5e-34 146.7 101 67.3
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 2.1e-33 145.6 101 68.3
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.1e-33 145.6 105 71.4
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.8e-33 145.2 101 68.3
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 2.8e-33 145.2 92 75.0
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 3.6e-33 144.8 102 68.6
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 3.6e-33 144.8 102 66.7
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.2e-33 144.1 102 71.6
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.2e-33 144.1 102 71.6
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 8.1e-33 143.7 101 66.3
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.8e-32 142.5 98 67.3
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 8.9e-32 140.2 101 65.3
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.5e-31 139.4 99 68.7
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 3.4e-31 138.3 102 65.7
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 4.4e-31 137.9 99 69.7
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 9.9e-31 136.7 98 67.3
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 4.9e-30 134.4 92 68.5
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 6.4e-30 134.0 92 68.5
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 1.1e-29 133.3 101 62.4
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.4e-29 132.1 89 73.0
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 7.8e-28 127.1 89 70.8
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 7.8e-28 127.1 91 74.7
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.1e-26 123.2 101 59.4
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.5e-26 122.9 101 61.4
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 1.9e-26 122.5 72 79.2
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 5.6e-26 120.9 103 55.3
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.2e-25 119.8 82 72.0
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 6.2e-25 117.5 78 73.1
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 3.4e-23 111.7 78 67.9
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 4.4e-23 111.3 75 69.3
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 2.9e-22 108.6 86 61.6
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 2.9e-22 108.6 82 53.7
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.9e-21 105.9 96 51.0
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 9.2e-21 103.6 67 73.1
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 7.3e-18 94.0 61 67.2
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-17 92.8 93 47.3
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 1.2e-12 76.6 85 52.9
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 4.3e-10 68.2 43 76.7
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 2.4e-08 62.4 44 70.5
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 5.3e-08 61.2 99 42.4


User provided reference genes

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