Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 3.0e-83 312.0 179 100.0
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 2.0e-63 246.1 209 73.2
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 2.6e-63 245.7 209 72.7
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 6.9e-56 221.1 206 54.4
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 1.3e-54 216.9 215 64.7
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 6.9e-48 194.5 203 51.2
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 6.9e-48 194.5 210 54.8
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 1.0e-46 190.7 203 55.2
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 9.4e-37 157.5 193 49.2
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 1.2e-36 157.1 149 66.4
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.7e-36 156.0 159 57.9
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 4.7e-36 155.2 149 57.7
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 1.0e-35 154.1 200 53.0
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 1.0e-35 154.1 184 56.0
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 3.0e-35 152.5 140 59.3
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 1.5e-34 150.2 182 44.5
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 2.0e-34 149.8 132 53.8
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 2.0e-34 149.8 134 63.4
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 4.4e-34 148.7 159 50.3
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 4.4e-34 148.7 135 62.2
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 5.7e-34 148.3 149 51.7
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 1.3e-33 147.1 134 65.7
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.3e-33 147.1 149 54.4
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 1.3e-33 147.1 143 51.0
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 2.2e-33 146.4 156 47.4
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 2.8e-33 146.0 159 51.6
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 3.7e-33 145.6 132 53.0
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 8.2e-33 144.4 132 67.4
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 1.4e-32 143.7 134 57.5
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 1.4e-32 143.7 150 46.7
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 3.1e-32 142.5 134 57.5
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 4.1e-32 142.1 142 59.9
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 5.3e-32 141.7 195 41.5
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 7.0e-32 141.4 110 60.0
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.2e-31 140.6 149 55.0
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.5e-31 140.2 132 57.6
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.5e-31 140.2 132 58.3
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 2.0e-31 139.8 171 45.0
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 2.6e-31 139.4 150 48.7
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 3.5e-31 139.0 150 59.3
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 3.5e-31 139.0 142 52.8
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 3.5e-31 139.0 136 67.6
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 5.9e-31 138.3 171 53.8
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 7.7e-31 137.9 99 65.7
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 3.8e-30 135.6 156 44.9
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 3.8e-30 135.6 140 55.0
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 5.0e-30 135.2 150 62.0
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 6.5e-30 134.8 167 53.3
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 8.5e-30 134.4 153 58.8
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 1.5e-29 133.7 99 58.6
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 1.9e-29 133.3 144 61.8
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 1.9e-29 133.3 149 44.3
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 1.9e-29 133.3 136 55.9
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 2.5e-29 132.9 161 45.3
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 4.2e-29 132.1 149 53.0
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 4.2e-29 132.1 170 52.9
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 9.4e-29 131.0 137 46.7
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 2.7e-28 129.4 167 43.7
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 2.3e-27 126.3 99 56.6
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 2.3e-27 126.3 99 56.6
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 2.3e-27 126.3 99 56.6
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 3.0e-27 125.9 142 58.5
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 8.8e-27 124.4 139 45.3
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 8.8e-27 124.4 156 54.5
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 2.0e-26 123.2 133 46.6
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 4.4e-26 122.1 142 55.6
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 9.7e-26 120.9 172 44.8
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 9.7e-26 120.9 137 51.8
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 2.2e-25 119.8 149 45.6
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 6.3e-25 118.2 145 43.4
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 1.1e-24 117.5 139 43.9
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 1.4e-24 117.1 132 60.6
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 2.4e-24 116.3 99 52.5
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 2.4e-24 116.3 99 52.5
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 2.4e-24 116.3 99 52.5
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 9.1e-24 114.4 100 53.0
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 1.2e-23 114.0 134 51.5
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 1.2e-23 114.0 145 46.9
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 1.2e-23 114.0 101 51.5
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 1.6e-23 113.6 99 51.5
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 1.6e-23 113.6 99 52.5
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 2.6e-23 112.8 145 46.2
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 3.5e-23 112.5 99 50.5
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 4.5e-23 112.1 141 53.2
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 4.5e-23 112.1 100 53.0
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 7.7e-23 111.3 159 45.3
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 2.2e-22 109.8 135 50.4
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 5.0e-22 108.6 101 50.5
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 6.5e-22 108.2 138 49.3
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 3.2e-21 105.9 100 55.0
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 1.6e-20 103.6 100 47.0
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 2.7e-20 102.8 100 46.0
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 3.6e-20 102.4 127 42.5
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 6.1e-20 101.7 102 50.0
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 8.0e-20 101.3 151 43.0
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.8e-19 100.1 104 43.3
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 4.4e-18 95.5 63 65.1
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 9.8e-18 94.4 100 46.0
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 9.8e-18 94.4 80 48.8
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 1.7e-17 93.6 97 47.4
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 1.7e-17 93.6 98 49.0
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 8.3e-17 91.3 136 47.8
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 7.0e-16 88.2 93 41.9
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 2.7e-12 76.3 62 58.1
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.2e-10 70.9 60 46.7
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 5.7e-10 68.6 99 38.4
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 3.1e-08 62.8 61 44.3
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 5.9e-07 58.5 87 43.7


User provided reference genes

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