Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.3e-96 356.3 171 100.0
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.1e-61 240.4 163 77.3
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.7e-51 206.5 188 60.1
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 1.4e-50 203.4 155 65.8
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 2.4e-50 202.6 121 81.0
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 2.4e-50 202.6 121 81.0
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 7.1e-50 201.1 164 63.4
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 2.1e-49 199.5 159 64.2
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 4.3e-47 191.8 164 61.6
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 4.3e-47 191.8 145 68.3
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 5.6e-47 191.4 164 61.6
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 7.6e-44 181.0 114 75.4
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.6e-41 173.3 126 65.9
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 6.0e-41 171.4 121 67.8
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 7.8e-41 171.0 119 69.7
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 7.8e-41 171.0 135 63.0
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 3.9e-40 168.7 130 62.3
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 6.6e-40 167.9 135 63.0
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 5.6e-39 164.9 119 63.9
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 5.6e-39 164.9 117 66.7
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 7.3e-39 164.5 121 66.1
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 9.6e-39 164.1 126 61.9
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 9.6e-39 164.1 126 61.1
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 1.3e-38 163.7 136 60.3
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.3e-38 163.7 117 66.7
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.6e-38 163.3 115 66.1
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.6e-38 163.3 121 66.1
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 1.6e-38 163.3 119 63.9
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 4.8e-38 161.8 121 66.1
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 6.2e-38 161.4 119 64.7
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 6.2e-38 161.4 152 53.3
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 1.4e-37 160.2 125 62.4
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.4e-37 159.5 116 64.7
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 2.4e-37 159.5 132 58.3
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 3.1e-37 159.1 117 62.4
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.1e-37 159.1 117 63.2
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 4.0e-37 158.7 119 66.4
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.3e-37 158.3 117 62.4
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 6.9e-37 157.9 117 61.5
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 9.0e-37 157.5 138 55.1
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 9.0e-37 157.5 117 61.5
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 9.0e-37 157.5 152 54.6
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.2e-36 157.1 119 61.3
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 1.2e-36 157.1 127 58.3
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.5e-36 156.8 115 65.2
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 2.0e-36 156.4 152 52.6
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 2.6e-36 156.0 135 58.5
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 3.4e-36 155.6 126 57.9
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 4.4e-36 155.2 117 63.2
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 4.4e-36 155.2 121 58.7
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 5.8e-36 154.8 116 63.8
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 9.9e-36 154.1 125 59.2
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.3e-35 153.7 127 58.3
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.2e-35 152.9 155 49.7
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 3.8e-35 152.1 119 62.2
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.1e-34 150.6 116 62.1
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.1e-34 150.6 139 56.1
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 1.1e-34 150.6 116 62.1
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 1.9e-34 149.8 139 56.1
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 2.4e-34 149.4 115 63.5
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 3.2e-34 149.1 124 57.3
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 4.2e-34 148.7 148 52.7
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 7.1e-34 147.9 124 55.6
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 7.1e-34 147.9 112 62.5
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 9.3e-34 147.5 121 59.5
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.2e-33 147.1 106 67.9
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.6e-33 146.7 121 57.0
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 2.7e-33 146.0 115 61.7
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 2.7e-33 146.0 158 46.2
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.5e-33 145.6 118 59.3
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.5e-33 145.6 118 59.3
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.3e-32 143.7 107 63.6
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.3e-32 143.7 113 62.8
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 1.3e-32 143.7 105 64.8
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.7e-32 143.3 117 60.7
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 3.0e-32 142.5 122 56.6
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 6.6e-32 141.4 115 58.3
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 6.6e-32 141.4 119 53.8
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 8.7e-32 141.0 125 51.2
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.9e-31 139.8 116 58.6
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.9e-31 139.8 122 55.7
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 1.9e-31 139.8 158 45.6
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 2.5e-31 139.4 116 57.8
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 5.6e-31 138.3 113 57.5
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.3e-30 137.1 113 54.9
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 2.1e-30 136.3 110 58.2
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 4.8e-30 135.2 113 54.9
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 4.8e-30 135.2 110 58.2
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 6.2e-30 134.8 142 47.2
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 6.2e-30 134.8 110 57.3
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 2.4e-29 132.9 113 55.8
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 9.0e-29 131.0 114 54.4
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 9.0e-29 131.0 114 54.4
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 9.0e-29 131.0 114 54.4
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 9.0e-29 131.0 114 54.4
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 3.4e-28 129.0 114 52.6
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 7.6e-28 127.9 145 50.3
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 4.9e-27 125.2 137 50.4
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 6.4e-27 124.8 109 55.0
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 8.4e-27 124.4 120 54.2
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 1.9e-26 123.2 129 49.6
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 1.8e-24 116.7 104 53.8
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 6.7e-24 114.8 113 47.8
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 1.9e-23 113.2 106 51.9
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 2.5e-23 112.8 109 51.4
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.1e-22 107.8 99 54.5
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.8e-21 106.7 77 64.9
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 4.0e-21 105.5 122 46.7
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 4.0e-21 105.5 122 46.7
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 6.5e-19 98.2 134 41.8
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 1.6e-17 93.6 84 52.4
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 2.6e-12 76.3 118 34.7
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 7.1e-10 68.2 94 40.4
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 2.3e-08 63.2 77 44.2


User provided reference genes

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