Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 1.0e-154 550.1 278 100.0
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 1.8e-119 433.0 279 81.0
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 8.6e-114 414.1 236 91.1
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 1.5e-113 413.3 278 76.3
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 3.1e-111 405.6 268 77.6
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 8.4e-109 397.5 270 77.8
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 4.7e-104 381.7 279 70.6
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 3.2e-100 369.0 242 75.2
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 7.1e-100 367.9 229 80.3
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 4.6e-99 365.2 285 68.1
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 2.3e-98 362.8 227 78.9
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 6.6e-98 361.3 225 79.1
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 1.9e-97 359.8 225 79.1
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 2.5e-97 359.4 271 69.4
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 4.8e-96 355.1 229 77.7
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 6.2e-96 354.8 282 65.6
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 1.2e-94 350.5 224 79.5
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 1.3e-93 347.1 224 77.7
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 1.3e-93 347.1 226 75.2
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.7e-93 346.7 230 74.3
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 2.2e-93 346.3 257 70.0
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 2.9e-93 345.9 231 73.6
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 2.9e-93 345.9 267 70.4
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 8.4e-93 344.4 264 68.2
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 1.1e-92 344.0 250 69.6
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.9e-92 343.2 230 73.5
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 3.2e-92 342.4 254 69.7
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 4.2e-92 342.0 230 73.5
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 5.4e-92 341.7 230 73.5
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 9.3e-92 340.9 264 66.7
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 1.2e-91 340.5 245 69.8
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 2.1e-91 339.7 251 68.1
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 2.1e-91 339.7 243 71.6
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 2.7e-91 339.3 251 70.1
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.0e-90 337.4 241 74.7
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 1.8e-90 336.7 236 71.6
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 1.8e-90 336.7 255 69.0
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 2.3e-90 336.3 260 63.8
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 3.9e-90 335.5 247 69.6
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 3.9e-90 335.5 254 67.7
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 6.7e-90 334.7 260 64.2
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 8.7e-90 334.3 243 68.7
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 8.7e-90 334.3 260 63.5
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 1.1e-89 334.0 262 64.9
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 1.5e-89 333.6 222 74.3
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 1.5e-89 333.6 268 64.6
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 2.5e-89 332.8 228 72.8
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 5.6e-89 331.6 223 75.3
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 7.4e-89 331.3 228 72.8
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 7.4e-89 331.3 252 69.4
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 7.4e-89 331.3 222 73.9
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 1.3e-88 330.5 231 72.7
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 1.6e-88 330.1 248 65.3
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 1.6e-88 330.1 246 68.3
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 1.6e-88 330.1 233 73.4
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 6.2e-88 328.2 254 67.7
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 6.2e-88 328.2 243 69.1
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 8.1e-88 327.8 267 63.7
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 4.0e-87 325.5 259 63.3
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 1.5e-86 323.6 272 61.8
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 2.0e-86 323.2 228 71.5
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 2.0e-86 323.2 224 71.4
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 3.4e-86 322.4 228 71.1
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 1.1e-84 317.4 275 61.5
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 4.6e-83 312.0 297 56.6
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 1.0e-82 310.8 254 62.6
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 3.9e-82 308.9 235 64.7
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 1.5e-81 307.0 226 69.9
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 5.6e-81 305.1 222 69.4
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 5.6e-81 305.1 225 66.2
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 9.6e-81 304.3 234 64.1
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 1.6e-80 303.5 255 59.2
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 1.8e-79 300.1 337 52.2
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 1.8e-79 300.1 228 67.1
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 1.2e-78 297.4 223 66.4
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 3.2e-76 289.3 222 67.6
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 7.1e-76 288.1 190 74.7
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 2.3e-74 283.1 237 60.8
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 3.3e-73 279.3 207 68.1
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 2.8e-72 276.2 182 76.9
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 9.0e-71 271.2 206 66.0
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 1.2e-70 270.8 248 58.9
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 2.1e-67 260.0 237 58.6
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 1.1e-65 254.2 245 55.9
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.8e-63 246.9 212 60.8
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 3.1e-63 246.1 240 53.3
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 8.5e-61 238.0 232 52.6
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 1.9e-60 236.9 188 64.9
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 7.2e-60 235.0 152 79.6
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 2.7e-59 233.0 166 73.5
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 6.7e-58 228.4 188 64.4
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 5.7e-57 225.3 203 52.7
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 1.8e-55 220.3 138 77.5
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 1.8e-55 220.3 143 74.1
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 7.2e-52 208.4 328 42.4
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 3.9e-50 202.6 199 55.3
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 3.9e-50 202.6 153 64.7
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 7.7e-46 188.3 143 65.0
Psat7g265400 Pisum sativum HOM05D007122 ORTHO05D008918 2.3e-34 150.2 88 86.4
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 2.8e-32 143.3 179 47.5
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 8.3e-32 141.7 166 43.4
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 7.0e-31 138.7 94 69.1
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 1.6e-27 127.5 254 34.3
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 3.0e-26 123.2 272 32.7
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 1.9e-20 104.0 60 80.0
SGA_v2.0_scaffold159G37569 Striga asiatica HOM05D007122 ORTHO05D008918 6.6e-13 79.0 116 39.7
FAN05G3242 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.1e-10 71.6 38 86.8
FAN14G0283 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.1e-10 71.6 38 86.8
Psat7g265360 Pisum sativum HOM05D007122 ORTHO05D008918 2.3e-10 70.5 54 70.4
FvH4_6g35960 Fragaria vesca HOM05D007122 ORTHO05D008918 5.2e-10 69.3 38 84.2
SEGI_22906 Sequoiadendron giganteum HOM05D002234 ORTHO05D002254 4.4e-09 66.2 236 28.4
PSO210G7268 Papaver somniferum HOM05D002234 ORTHO05D002254 8.3e-08 62.0 247 24.7
Lalb_Chr16g0381141 Lupinus albus HOM05D002234 ORTHO05D002254 3.2e-07 60.1 236 27.5
PRCOL_00001829 Prasinoderma coloniale HOM05D002234 ORTHO05D002254 4.1e-07 59.7 238 26.1
Psat7g048760 Pisum sativum HOM05D005663 ORTHO05D007258 1.2e-06 58.2 223 26.0
C04p72510 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-06 57.4 75 44.0
BolC4t28739H Brassica oleracea HOM05D000051 ORTHO05D000015 2.1e-06 57.4 75 44.0
Sp3g21070 Schrenkiella parvula HOM05D006432 ORTHO05D008257 2.1e-06 57.4 223 26.9
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 3.5e-06 56.6 109 29.4
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 4.6e-06 56.2 265 25.3
Thhalv10021276m.g Eutrema salsugineum HOM05D006432 ORTHO05D008257 4.6e-06 56.2 265 25.7
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 7.8e-06 55.5 265 25.3
CARHR099370 Cardamine hirsuta HOM05D006432 ORTHO05D008257 7.8e-06 55.5 261 24.9


User provided reference genes

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