Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 2.2e-141 505.8 284 100.0
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.4e-90 337.0 284 71.1
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 9.8e-89 330.9 290 70.0
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 8.3e-88 327.8 286 71.7
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 1.4e-63 247.3 282 57.4
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 9.3e-63 244.6 280 56.8
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 1.7e-61 240.4 285 56.8
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 5.1e-61 238.8 297 55.6
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 4.2e-55 219.2 284 53.9
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 4.6e-54 215.7 302 54.3
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.5e-49 200.7 280 51.4
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 2.0e-41 173.7 239 47.7
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 2.0e-41 173.7 283 45.2
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.6e-41 173.3 223 51.6
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.3e-40 171.0 291 45.7
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.7e-40 170.6 223 51.1
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 2.9e-40 169.9 226 50.0
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 4.9e-40 169.1 294 43.9
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 6.5e-40 168.7 282 46.1
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 1.4e-39 167.5 235 47.2
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-39 167.5 223 50.7
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 2.5e-39 166.8 148 62.2
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 2.5e-39 166.8 282 45.7
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 3.2e-39 166.4 134 68.7
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 3.2e-39 166.4 240 47.1
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.2e-39 166.0 217 51.2
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 7.1e-39 165.2 159 59.1
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 7.1e-39 165.2 252 48.0
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 9.3e-39 164.9 144 59.0
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 6.0e-38 162.2 206 51.9
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 7.9e-38 161.8 274 46.7
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.0e-37 161.4 256 46.1
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 1.3e-37 161.0 214 48.1
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 1.8e-37 160.6 243 46.9
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 3.9e-37 159.5 209 49.8
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 6.7e-37 158.7 146 63.0
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 6.7e-37 158.7 241 46.5
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 1.5e-36 157.5 135 62.2
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 1.9e-36 157.1 249 45.8
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 2.5e-36 156.8 116 66.4
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 2.5e-36 156.8 178 55.6
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 3.3e-36 156.4 237 45.1
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.3e-36 156.0 286 45.8
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 4.3e-36 156.0 184 55.4
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 4.3e-36 156.0 223 48.0
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 5.7e-36 155.6 197 49.7
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 9.6e-36 154.8 250 48.0
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 1.3e-35 154.5 278 41.4
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 2.1e-35 153.7 265 43.0
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 2.1e-35 153.7 200 49.5
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 4.8e-35 152.5 164 53.0
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 6.3e-35 152.1 282 44.0
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 6.3e-35 152.1 237 47.3
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.1e-34 151.4 235 47.2
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 1.1e-34 151.4 110 70.0
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.4e-34 151.0 239 45.6
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.8e-34 150.6 282 42.2
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 2.4e-34 150.2 278 41.4
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 4.1e-34 149.4 287 42.5
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 5.3e-34 149.1 292 39.4
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 5.3e-34 149.1 234 46.2
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 6.9e-34 148.7 144 59.7
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 6.9e-34 148.7 243 44.0
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.5e-33 147.5 271 42.1
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 1.5e-33 147.5 225 47.1
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.5e-33 147.5 282 40.1
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 2.0e-33 147.1 262 44.7
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 2.6e-33 146.7 144 55.6
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 4.5e-33 146.0 231 46.3
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 7.6e-33 145.2 179 49.2
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 1.0e-32 144.8 134 57.5
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.0e-32 144.8 265 41.9
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.0e-32 144.8 133 58.6
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.7e-32 144.1 176 52.8
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 1.7e-32 144.1 222 45.0
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 3.8e-32 142.9 180 48.3
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 5.0e-32 142.5 214 46.7
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 3.2e-31 139.8 202 45.0
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 7.2e-31 138.7 112 64.3
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 7.2e-31 138.7 112 64.3
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.6e-30 137.5 279 41.9
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 2.7e-30 136.7 301 40.9
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 6.1e-30 135.6 255 42.7
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.3e-29 134.4 277 41.2
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 1.8e-29 134.0 255 41.6
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 2.3e-29 133.7 163 52.8
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 2.3e-29 133.7 239 41.8
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 8.7e-29 131.7 252 40.5
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 8.7e-29 131.7 219 46.1
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.5e-28 130.2 210 43.3
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 2.5e-28 130.2 262 40.5
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 5.7e-28 129.0 295 38.6
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 7.4e-28 128.6 282 39.7
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 7.4e-28 128.6 202 45.0
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 7.4e-28 128.6 202 45.0
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 9.7e-28 128.3 190 46.8
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.3e-27 127.9 288 40.3
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 8.2e-27 125.2 203 42.9
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 8.2e-27 125.2 203 42.9
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 5.3e-26 122.5 93 64.5
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 6.9e-26 122.1 200 44.5
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 2.6e-25 120.2 117 50.4
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.2e-23 113.2 159 44.7
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.9e-21 106.3 201 41.3
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.6e-20 103.6 124 49.2
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 7.4e-20 102.1 130 44.6
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 6.3e-19 99.0 102 49.0
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 9.1e-18 95.1 96 46.9
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.0e-17 94.0 65 67.7
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 2.0e-17 94.0 64 68.8
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 2.6e-17 93.6 55 80.0
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.6e-17 93.6 59 74.6
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.5e-17 92.8 61 72.1
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.5e-17 92.8 61 72.1
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.7e-16 90.9 63 68.3
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.2e-14 84.7 54 79.6
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 5.3e-10 69.3 121 38.8
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 9.1e-10 68.6 47 72.3
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.2e-09 68.2 75 53.3
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 7.7e-09 65.5 181 33.1
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 7.7e-09 65.5 90 47.8


User provided reference genes

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