Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 2.4e-248 861.7 424 100.0
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 3.7e-225 784.6 446 88.1
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 2.7e-215 751.9 445 83.6
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 7.3e-213 743.8 432 84.0
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 2.2e-209 732.3 443 82.4
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 5.0e-206 721.1 444 80.9
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 5.6e-205 717.6 432 81.7
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 2.6e-194 682.2 435 78.9
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 4.9e-193 677.9 441 75.5
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 1.6e-191 672.9 439 76.1
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 5.1e-190 667.9 444 74.5
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 4.3e-189 664.8 440 74.3
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 2.8e-188 662.1 436 76.4
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 1.1e-187 660.2 437 75.7
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 1.4e-187 659.8 404 81.4
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 2.4e-187 659.1 439 73.3
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.4e-187 659.1 419 76.8
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 3.1e-187 658.7 457 70.9
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 5.2e-187 657.9 419 76.6
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.5e-186 656.4 436 74.3
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 4.4e-186 654.8 379 85.0
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 5.8e-186 654.4 435 74.3
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 9.9e-186 653.7 452 71.7
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 3.8e-185 651.7 438 72.8
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 1.6e-183 646.4 441 72.6
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 2.1e-183 646.0 439 72.7
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 1.0e-182 643.7 419 74.2
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 3.0e-182 642.1 454 70.7
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 3.0e-182 642.1 424 73.6
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 3.9e-182 641.7 418 74.9
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 8.7e-182 640.6 429 73.7
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.5e-181 639.8 421 73.6
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 1.9e-181 639.4 429 73.0
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 1.9e-181 639.4 377 81.4
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 2.5e-181 639.0 436 72.9
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 4.3e-181 638.3 440 72.7
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 4.3e-181 638.3 420 73.3
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 4.3e-181 638.3 437 71.9
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 9.6e-181 637.1 422 73.2
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.2e-180 636.7 431 72.6
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.2e-180 636.7 436 70.9
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 3.6e-180 635.2 420 73.3
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 8.1e-180 634.0 419 73.3
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.1e-179 633.6 423 72.8
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.4e-179 633.3 432 71.8
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 2.4e-179 632.5 445 71.0
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 3.1e-179 632.1 423 73.0
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 5.2e-179 631.3 422 73.2
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 2.6e-178 629.0 434 70.5
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 7.6e-178 627.5 440 70.2
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 7.6e-178 627.5 431 70.8
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 9.9e-178 627.1 418 73.0
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 4.9e-177 624.8 440 71.4
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 1.1e-176 623.6 462 68.2
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 2.4e-176 622.5 473 66.8
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 7.1e-176 620.9 390 77.2
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 1.2e-175 620.2 424 70.3
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 1.2e-175 620.2 422 70.4
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 1.6e-175 619.8 438 70.5
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 2.1e-175 619.4 446 68.8
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 6.0e-175 617.8 422 70.9
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 6.0e-175 617.8 440 68.6
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 7.8e-175 617.5 422 70.6
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 7.8e-175 617.5 410 72.9
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 1.0e-174 617.1 424 70.0
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.3e-174 615.9 419 71.1
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 2.3e-174 615.9 386 77.2
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 6.6e-174 614.4 424 69.6
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 6.6e-174 614.4 378 77.5
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 8.7e-174 614.0 443 71.8
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 1.5e-173 613.2 436 70.0
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 7.3e-173 610.9 428 71.7
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 5.3e-171 604.7 386 75.4
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 1.2e-170 603.6 384 74.5
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 3.4e-170 602.1 385 74.3
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 1.6e-167 593.2 380 73.4
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 7.9e-167 590.9 390 75.1
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 5.3e-163 578.2 438 67.4
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 1.1e-160 570.5 339 79.9
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 2.5e-157 559.3 403 68.0
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.2e-154 550.4 423 66.4
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 7.6e-154 547.7 404 68.3
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 1.3e-153 547.0 437 66.1
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.7e-153 546.6 353 74.5
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 1.5e-149 533.5 405 65.2
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 1.4e-147 526.9 434 59.2
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 9.4e-144 514.2 417 60.0
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 7.4e-141 504.6 313 76.0
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 5.3e-139 498.4 436 60.8
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 3.4e-130 469.2 435 57.7
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.1e-125 454.1 326 67.5
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 1.6e-114 417.2 420 53.6
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 8.5e-113 411.4 459 48.4
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.6e-106 390.6 246 75.2
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 1.5e-96 357.5 242 69.4
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 6.8e-94 348.6 438 44.7
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 7.0e-91 338.6 285 61.1
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 2.7e-90 336.7 285 61.1
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 1.5e-88 330.9 201 74.6
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 7.8e-82 308.5 229 69.4
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 5.6e-80 302.4 259 56.8
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 2.1e-71 273.9 235 60.9
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 8.9e-70 268.5 288 54.2
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 2.9e-68 263.5 211 64.0
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 6.2e-63 245.7 179 67.0
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 8.4e-60 235.3 439 38.3
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 2.1e-42 177.6 95 90.5
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 4.2e-35 153.3 89 85.4
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 3.7e-31 140.2 92 75.0
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.3e-24 116.7 110 53.6
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 2.0e-16 91.3 58 72.4
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 1.8e-09 68.2 42 76.2


User provided reference genes

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