Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 0.0e+00 1079.3 541 100.0
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 5.5e-274 947.2 549 88.9
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 2.7e-268 928.3 536 87.5
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 1.8e-264 915.6 544 86.9
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 6.8e-256 887.1 556 81.1
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 7.5e-255 883.6 543 82.5
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 2.1e-249 865.5 558 79.2
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 8.9e-248 860.1 548 79.9
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 1.2e-247 859.8 558 78.7
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 1.5e-247 859.4 550 78.9
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 4.4e-247 857.8 545 80.4
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 1.4e-245 852.8 551 78.9
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 1.3e-227 793.1 519 75.1
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 3.3e-226 788.5 515 75.3
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 2.8e-225 785.4 537 73.4
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 6.2e-225 784.3 542 73.4
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 1.1e-224 783.5 555 73.2
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.8e-224 782.7 537 73.0
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 1.8e-224 782.7 546 71.8
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 4.0e-224 781.6 541 72.5
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 5.2e-224 781.2 537 73.4
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 2.0e-223 779.2 534 72.1
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 3.4e-223 778.5 564 69.3
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 5.8e-223 777.7 534 72.7
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 2.2e-222 775.8 536 72.2
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 2.9e-222 775.4 534 72.7
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.1e-221 773.5 504 75.6
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 1.9e-221 772.7 553 70.7
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 3.2e-221 771.9 533 72.4
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 5.4e-221 771.2 550 70.9
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 2.1e-220 769.2 528 72.9
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 1.3e-219 766.5 504 75.4
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 2.3e-219 765.8 535 71.2
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 2.5e-218 762.3 508 74.0
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 3.3e-218 761.9 545 70.6
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 5.6e-218 761.1 537 71.1
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 7.3e-218 760.8 547 70.7
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 6.2e-217 757.7 524 71.8
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 6.2e-217 757.7 547 70.6
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 1.8e-216 756.1 539 69.6
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 1.8e-216 756.1 552 70.7
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 2.4e-216 755.7 525 72.0
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 4.0e-216 755.0 543 69.2
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 6.9e-216 754.2 525 71.8
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 6.9e-216 754.2 506 73.9
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 1.5e-215 753.1 525 71.8
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 4.4e-215 751.5 525 72.4
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 5.8e-215 751.1 537 70.0
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 1.3e-214 750.0 438 82.2
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.3e-214 750.0 524 71.9
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 1.7e-214 749.6 491 74.9
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 2.2e-214 749.2 531 70.6
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 2.2e-214 749.2 514 71.8
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.9e-214 748.8 556 68.9
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 4.9e-214 748.0 501 73.7
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 4.9e-214 748.0 550 68.5
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 4.9e-214 748.0 562 68.7
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 6.4e-214 747.7 489 74.8
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 4.2e-213 745.0 533 71.1
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 5.4e-213 744.6 534 69.9
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 7.1e-213 744.2 530 70.0
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 7.1e-213 744.2 522 71.5
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 7.1e-213 744.2 539 69.9
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 9.3e-213 743.8 521 71.8
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 9.3e-213 743.8 533 70.4
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 2.7e-212 742.3 452 78.5
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 6.0e-212 741.1 503 72.2
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 1.0e-211 740.3 532 69.5
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 1.7e-211 739.6 456 78.3
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 3.9e-211 738.4 531 69.9
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 5.1e-211 738.0 497 73.2
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 1.1e-210 736.9 553 68.9
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 2.5e-210 735.7 545 69.7
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 7.3e-210 734.2 534 70.4
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 1.3e-209 733.4 534 69.3
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 6.9e-208 727.6 476 75.6
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 6.9e-208 727.6 438 79.2
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 4.5e-207 724.9 523 69.4
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.3e-206 723.4 537 68.3
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 1.4e-205 719.9 516 69.2
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.3e-203 713.4 537 68.0
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 3.0e-203 712.2 422 80.1
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 1.5e-202 709.9 503 70.6
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 1.5e-202 709.9 624 61.4
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 1.9e-202 709.5 442 76.0
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 4.3e-202 708.4 494 72.3
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 4.3e-202 708.4 482 72.4
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 3.6e-201 705.3 438 76.3
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 4.8e-201 704.9 537 67.2
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.8e-200 703.0 449 75.3
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 3.1e-200 702.2 499 69.5
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 1.2e-199 700.3 501 68.9
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 1.2e-199 700.3 521 68.5
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 4.5e-199 698.4 439 77.0
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 3.8e-198 695.3 440 75.7
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 1.4e-197 693.3 521 68.7
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 4.5e-183 645.2 372 82.8
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 1.2e-175 620.5 544 62.5
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 7.7e-175 617.8 506 61.3
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 2.2e-174 616.3 412 72.6
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 4.2e-165 585.5 373 78.0
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 1.3e-153 547.4 436 60.8
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 5.3e-152 542.0 440 58.9
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 2.3e-147 526.6 380 69.7
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 5.7e-146 521.9 428 64.0
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 1.1e-144 517.7 437 58.4
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 1.3e-134 484.2 442 53.8
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 2.4e-112 410.2 505 48.3
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 1.0e-110 404.8 527 42.7
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 3.9e-110 402.9 506 47.4
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 1.8e-107 394.0 480 45.2
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 3.1e-107 393.3 501 47.5
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 2.0e-106 390.6 440 50.7
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 1.7e-102 377.5 512 45.5
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 3.3e-101 373.2 560 44.6
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 1.8e-99 367.5 483 43.1
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 2.4e-99 367.1 255 70.6
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 6.4e-97 359.0 511 45.2
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 3.1e-83 313.5 176 85.2
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 4.9e-81 306.2 169 90.5
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 1.6e-79 301.2 477 37.9
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 4.8e-52 209.9 152 72.4
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 7.0e-43 179.5 215 51.6
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 3.3e-37 160.6 137 60.6
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.1e-35 155.6 131 60.3
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 3.6e-31 140.6 105 69.5
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.8e-30 138.3 74 87.8
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 3.3e-24 117.5 141 46.1
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 9.8e-21 105.9 104 56.7
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 5.9e-18 96.7 59 76.3
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 8.3e-12 76.3 115 42.6
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 2.0e-10 71.6 115 42.6
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 2.1e-07 61.6 118 42.4
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 8.0e-07 59.7 38 73.7
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 5.2e-06 57.0 139 36.0


User provided reference genes

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