Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 1.7e-222 775.8 414 100.0
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 4.6e-180 634.8 417 83.2
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 1.1e-176 623.6 419 80.7
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 7.2e-173 610.9 415 81.0
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 1.0e-163 580.5 415 76.6
arahy.Tifrunner.gnm1.ann1.YZ0HQS Arachis hypogaea HOM05D005133 ORTHO05D006685 2.2e-161 572.8 414 76.1
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 1.4e-160 570.1 414 75.8
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 1.3e-158 563.5 414 75.1
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 1.7e-158 563.1 414 75.6
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 1.1e-157 560.5 414 75.6
Lalb_Chr19g0138411 Lupinus albus HOM05D005133 ORTHO05D006685 1.8e-155 553.1 414 73.2
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 1.0e-142 510.8 357 79.3
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 1.8e-139 500.0 415 68.7
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 1.8e-139 500.0 415 68.7
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 1.5e-138 496.9 415 68.0
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 1.7e-137 493.4 414 67.6
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 1.8e-136 490.0 415 65.3
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 1.0e-131 474.2 414 64.0
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 1.5e-130 470.3 415 63.4
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 2.6e-130 469.5 417 64.3
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 3.4e-130 469.2 414 65.0
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 2.2e-129 466.5 415 63.4
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 8.3e-129 464.5 415 63.1
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 1.0e-126 457.6 414 61.8
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 2.5e-125 453.0 416 61.8
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 2.5e-125 453.0 415 61.4
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 4.0e-123 445.7 414 59.7
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 1.2e-122 444.1 426 59.2
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 3.4e-122 442.6 414 62.1
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 2.2e-121 439.9 396 63.1
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 3.7e-121 439.1 418 61.0
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 4.9e-121 438.7 460 57.8
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 8.3e-121 438.0 405 60.5
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 2.4e-120 436.4 419 59.4
Prupe.2G179100 Prunus persica HOM05D005133 ORTHO05D006685 7.8e-119 431.4 415 58.8
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 3.9e-118 429.1 416 60.1
TWI34G1432 Tripterygium wilfordii HOM05D005133 ORTHO05D006685 1.9e-117 426.8 422 58.5
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 4.3e-117 425.6 415 59.3
SalBow3G2243 Salvia bowleyana HOM05D005133 ORTHO05D006685 5.6e-117 425.2 440 58.0
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.2e-116 424.1 415 57.8
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 3.6e-116 422.5 336 69.9
DCAR_025229 Daucus carota HOM05D005133 ORTHO05D006685 6.2e-116 421.8 391 60.6
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 6.2e-116 421.8 407 60.7
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.8e-115 420.2 409 59.2
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 2.3e-115 419.9 380 66.1
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 5.2e-115 418.7 424 56.8
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 1.2e-114 417.5 413 58.4
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 2.0e-114 416.8 407 60.0
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 2.0e-114 416.8 408 59.8
PGR031G0061 Punica granatum HOM05D005133 ORTHO05D006685 4.4e-114 415.6 417 59.0
Haze_15576 Corylus avellana HOM05D005133 ORTHO05D006685 5.8e-114 415.2 416 57.5
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.3e-113 414.1 416 57.7
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.7e-113 412.5 416 57.7
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 1.1e-112 411.0 414 58.7
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 1.4e-112 410.6 401 60.3
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 5.4e-112 408.7 418 58.4
MD07G1130200 Malus domestica HOM05D005133 ORTHO05D006685 2.1e-111 406.8 415 56.4
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 3.5e-111 406.0 418 56.7
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 1.3e-110 404.1 433 57.0
Nn7g37315 Nelumbo nucifera HOM05D005133 ORTHO05D006685 1.3e-110 404.1 417 56.4
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 6.6e-110 401.7 354 63.3
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 7.3e-109 398.3 416 56.2
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 7.3e-109 398.3 414 57.0
FAN06G1776 Fragaria x ananassa HOM05D005133 ORTHO05D006685 4.7e-108 395.6 384 57.3
FAN10G2939 Fragaria x ananassa HOM05D005133 ORTHO05D006685 4.7e-108 395.6 386 56.7
Haze_15581 Corylus avellana HOM05D005133 ORTHO05D006685 6.2e-108 395.2 414 56.0
FvH4_7g15540 Fragaria vesca HOM05D005133 ORTHO05D006685 1.8e-107 393.7 384 57.0
FAN10G2725 Fragaria x ananassa HOM05D005133 ORTHO05D006685 6.8e-107 391.7 386 56.2
SalBow1G3823 Salvia bowleyana HOM05D005133 ORTHO05D006685 1.5e-106 390.6 361 61.8
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 7.6e-106 388.3 412 54.1
HanXRQChr17g0562291 Helianthus annuus HOM05D005133 ORTHO05D006685 9.9e-106 387.9 415 53.7
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 1.7e-105 387.1 395 58.2
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 1.1e-104 384.4 369 60.4
Sc01g0003150 Simmondsia chinensis HOM05D005133 ORTHO05D006685 9.2e-104 381.3 414 55.8
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 1.2e-103 380.9 387 59.4
FAN06G1340 Fragaria x ananassa HOM05D005133 ORTHO05D006685 1.6e-103 380.6 394 54.8
EL10Ac1g00344 Beta vulgaris HOM05D005133 ORTHO05D006685 1.9e-101 373.6 413 52.8
Hund27238 Selenicereus undatus HOM05D005133 ORTHO05D006685 3.6e-100 369.4 424 54.0
ECA234G4221 Erigeron canadensis HOM05D005133 ORTHO05D006685 1.1e-99 367.9 416 52.6
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 6.9e-99 365.2 413 54.2
CAN.G78.137 Capsicum annuum HOM05D005133 ORTHO05D006685 7.6e-98 361.7 407 54.1
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 1.7e-97 360.5 406 53.4
AL4G45460 Arabidopsis lyrata HOM05D005133 ORTHO05D006685 2.2e-97 360.1 413 51.6
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 1.1e-96 357.8 511 45.6
Thhalv10001493m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 1.9e-96 357.1 412 51.0
THA.LOC104817324 Tarenaya hassleriana HOM05D005133 ORTHO05D006685 2.4e-96 356.7 411 51.8
Eucgr.J01063 Eucalyptus grandis HOM05D005133 ORTHO05D006685 5.4e-96 355.5 398 53.3
Aa31LG1G27580 Aethionema arabicum HOM05D005133 ORTHO05D006685 9.3e-96 354.8 412 51.0
AUR62004420 Chenopodium quinoa HOM05D005133 ORTHO05D006685 1.2e-95 354.4 395 53.9
Lsat_1_v5_gn_4_34900 Lactuca sativa HOM05D005133 ORTHO05D006685 4.6e-95 352.4 415 49.6
BcaC02g12707 Brassica carinata HOM05D005133 ORTHO05D006685 1.0e-94 351.3 392 51.8
BraA05t19159Z Brassica rapa HOM05D005133 ORTHO05D006685 6.6e-94 348.6 391 51.2
A05p01630 Brassica napus HOM05D005133 ORTHO05D006685 1.1e-93 347.8 412 50.2
Sp5g32810 Schrenkiella parvula HOM05D005133 ORTHO05D006685 4.8e-92 342.4 413 48.9
C04p01840 Brassica napus HOM05D005133 ORTHO05D006685 2.4e-91 340.1 412 49.0
Zm00001eb339090 Zea mays HOM05D005133 ORTHO05D006685 3.1e-91 339.7 399 49.9
BcaC02g12500 Brassica carinata HOM05D005133 ORTHO05D006685 4.0e-91 339.3 412 49.3
ATR0626G352 Amborella trichopoda HOM05D005133 ORTHO05D006685 9.0e-91 338.2 405 50.4
vmacro20884 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 9.0e-91 338.2 511 45.2
Os01g0226500 Oryza sativa ssp. japonica HOM05D005133 ORTHO05D006685 2.2e-89 333.6 401 49.1
Carub.0004s2888 Capsella rubella HOM05D005133 ORTHO05D006685 1.1e-88 331.3 411 48.2
Thhalv10028732m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 1.2e-87 327.8 412 47.8
CARHR141470 Cardamine hirsuta HOM05D005133 ORTHO05D006685 1.3e-81 307.8 434 45.2
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 1.1e-80 304.7 377 51.2
MBI16_g41624_MAGBIO Magnolia biondii HOM05D005133 ORTHO05D006685 1.2e-79 301.2 417 47.7
vmacro13220 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 1.0e-78 298.1 336 54.8
AT2G46200 Arabidopsis thaliana HOM05D005133 ORTHO05D006685 1.1e-77 294.7 376 49.5
arahy.Tifrunner.gnm1.ann1.Z00T6Z Arachis hypogaea HOM05D005133 ORTHO05D006685 2.5e-77 293.5 227 71.4
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 6.5e-73 278.9 292 56.8
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 4.6e-63 246.1 421 43.0
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 4.1e-59 233.0 349 47.9
vmacro22850 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 3.4e-58 229.9 354 44.1
PSO478G1127 Papaver somniferum HOM05D005133 ORTHO05D006685 2.9e-57 226.9 261 55.6
CDE09G0708 Ceratophyllum demersum HOM05D005133 ORTHO05D006685 1.1e-56 224.9 324 48.1
RcHm_v2.0_Chr1g0358051 Rosa chinensis HOM05D005133 ORTHO05D006685 1.2e-55 221.5 353 43.9
Pp3c4_26280 Physcomitrium patens HOM05D005133 ORTHO05D006685 1.6e-55 221.1 351 41.6
PSO384G2230 Papaver somniferum HOM05D005133 ORTHO05D006685 3.0e-54 216.9 240 53.3
Mapoly0001s0322 Marchantia polymorpha HOM05D005133 ORTHO05D006685 2.6e-53 213.8 438 36.5
Glyma.11G125567 Glycine max HOM05D005133 ORTHO05D006685 7.0e-43 179.1 135 68.9
AagrBONN_evm.TU.Sc2ySwM_344.4499 Anthoceros agrestis HOM05D005133 ORTHO05D006685 2.7e-39 167.2 419 33.2
Zm00001eb201120 Zea mays HOM05D005133 ORTHO05D006685 4.7e-31 139.8 152 52.0
Zm00001eb407270 Zea mays HOM05D005133 ORTHO05D006685 4.7e-31 139.8 152 52.0
Gohir.A03G093200 Gossypium hirsutum HOM05D005133 ORTHO05D006685 2.6e-29 134.0 172 52.9
SMO239G0112 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 9.8e-29 132.1 354 32.8
FAN03G0151 Fragaria x ananassa HOM05D005133 ORTHO05D006685 3.1e-27 127.1 83 66.3
SHI13349 Sapria himalayana HOM05D005133 ORTHO05D006685 1.5e-24 118.2 140 50.0
CBR_g45167 Chara braunii HOM05D005133 ORTHO05D006685 8.0e-23 112.5 290 30.3
HanXRQChr04g0107751 Helianthus annuus HOM05D005133 ORTHO05D006685 7.5e-21 105.9 98 67.3
Rhsim01G0168000 Rhododendron simsii HOM05D005133 ORTHO05D006685 9.2e-19 99.0 73 79.5
vmacro01745 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 6.6e-17 92.8 127 44.9
AUR62025074 Chenopodium quinoa HOM05D005133 ORTHO05D006685 2.2e-12 77.8 65 64.6
C04p01870 Brassica napus HOM05D005133 ORTHO05D006685 8.3e-12 75.9 40 77.5
SMO117G0103 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 2.4e-11 74.3 171 37.4
SMO114G0022 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 5.9e-10 69.7 93 45.2
RcHm_v2.0_Chr1g0358101 Rosa chinensis HOM05D004139 ORTHO05D004873 3.0e-09 67.4 122 40.2
FvH4_2g33570 Fragaria vesca HOM05D000073 ORTHO05D015767 2.1e-07 61.2 79 48.1
Rhsim01G0167900 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.2e-06 56.6 72 55.6


User provided reference genes

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