Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 1.0e-137 493.4 250 100.0
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 4.5e-130 468.0 250 94.0
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.1e-128 463.4 250 94.0
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.0e-126 455.3 250 91.2
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 2.0e-125 452.6 250 90.0
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 2.8e-124 448.7 250 90.0
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.1e-123 446.8 250 89.6
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.4e-123 446.4 250 90.4
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 3.1e-123 445.3 250 88.8
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.0e-118 430.3 251 86.5
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.0e-118 430.3 251 86.5
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 4.4e-117 424.9 247 84.2
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.8e-115 419.5 250 83.6
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 2.4e-115 419.1 247 84.2
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 9.2e-115 417.2 250 80.8
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.2e-114 416.8 249 80.7
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 3.5e-114 415.2 250 83.6
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.0e-113 413.7 242 83.5
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 2.3e-113 412.5 248 82.3
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 2.3e-113 412.5 250 81.6
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 3.0e-113 412.1 250 80.8
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 3.9e-113 411.8 250 82.0
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 4.3e-112 408.3 241 82.6
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.2e-111 406.8 245 80.8
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.6e-111 406.4 246 80.9
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.6e-111 406.4 242 81.0
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 2.8e-111 405.6 245 82.0
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.7e-111 404.8 242 80.6
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 4.7e-111 404.8 242 81.0
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 6.2e-111 404.4 242 81.8
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.2e-109 400.2 247 78.9
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.2e-109 400.2 242 81.8
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 1.5e-109 399.8 240 82.5
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 5.8e-109 397.9 242 81.4
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.2e-108 396.0 245 78.0
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 2.2e-108 396.0 248 77.4
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 2.2e-108 396.0 248 77.8
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 1.4e-107 393.3 248 75.8
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.9e-107 392.9 245 78.4
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 7.0e-107 391.0 248 75.0
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 7.0e-107 391.0 248 75.0
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 2.0e-106 389.4 242 76.0
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 2.0e-106 389.4 257 75.5
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 2.7e-106 389.0 242 75.6
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 2.7e-106 389.0 242 78.1
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 6.0e-106 387.9 245 78.0
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 6.0e-106 387.9 248 74.2
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.3e-105 386.0 245 75.9
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 3.0e-105 385.6 241 75.1
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 8.6e-105 384.0 247 74.1
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 1.1e-104 383.6 247 73.7
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 1.1e-104 383.6 247 73.7
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 1.1e-104 383.6 247 73.7
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.1e-104 383.6 242 76.0
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.1e-104 383.6 252 76.2
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.5e-104 383.3 247 74.1
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.5e-104 383.3 249 75.9
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.5e-104 383.3 247 72.9
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.9e-104 382.9 246 76.0
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 7.3e-104 380.9 246 76.8
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 2.1e-103 379.4 245 75.5
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 2.8e-103 379.0 247 73.3
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 2.8e-103 379.0 243 77.0
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 4.7e-103 378.3 247 72.5
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 6.2e-103 377.9 262 71.0
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 6.2e-103 377.9 249 74.3
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 1.1e-102 377.1 250 74.4
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 5.2e-102 374.8 247 73.3
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 6.8e-102 374.4 245 75.5
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 1.2e-101 373.6 245 73.9
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 2.6e-101 372.5 241 75.5
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.9e-99 366.3 247 72.1
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 1.7e-97 359.8 242 71.9
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 2.3e-97 359.4 240 69.6
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 8.6e-97 357.5 234 74.8
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 9.5e-96 354.0 245 71.4
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.8e-94 349.7 243 74.5
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.8e-94 349.7 203 84.7
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 3.1e-94 349.0 245 68.6
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 3.4e-93 345.5 248 68.5
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 9.9e-93 344.0 242 69.4
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.9e-91 339.7 245 67.3
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 7.1e-91 337.8 208 79.8
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 1.2e-90 337.0 213 79.8
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.6e-90 336.7 242 66.5
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.0e-89 334.0 242 68.6
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.3e-89 333.6 242 68.6
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 3.9e-89 332.0 207 78.7
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 3.6e-87 325.5 246 67.1
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.4e-86 323.6 245 62.9
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.1e-86 322.4 198 74.7
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 9.9e-85 317.4 184 84.8
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 4.2e-83 312.0 242 68.2
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 2.3e-81 306.2 202 77.7
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 1.3e-79 300.4 196 68.9
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 4.9e-76 288.5 258 63.6
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 9.3e-75 284.3 245 61.2
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 8.7e-73 277.7 242 60.7
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.0e-65 254.2 249 49.0
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 5.1e-65 251.9 236 51.7
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 9.6e-64 247.7 238 53.4
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.0e-60 237.7 239 49.8
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.9e-60 236.1 242 47.1
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 3.2e-59 232.6 202 63.9
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 1.2e-58 230.7 158 68.4
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.0e-49 201.1 159 59.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 1.5e-48 197.2 158 65.2
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 3.3e-48 196.1 149 64.4
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 7.4e-48 194.9 151 65.6
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 9.7e-48 194.5 159 61.0
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 6.9e-46 188.3 121 77.7
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 2.2e-44 183.3 110 81.8
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 1.8e-33 147.1 119 63.9
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.5e-32 144.1 91 74.7
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 2.6e-32 143.3 92 76.1
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 5.3e-30 135.6 95 66.3
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 7.0e-30 135.2 231 35.9
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.5e-16 90.9 71 62.0
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 2.6e-16 90.1 163 32.5
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 5.7e-16 89.0 171 40.9
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 1.3e-07 61.2 38 84.2
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 3.7e-07 59.7 40 55.0


User provided reference genes

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