Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 1.1e-190 669.8 341 100.0
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 7.3e-155 550.8 340 81.2
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 1.3e-140 503.4 347 76.4
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 3.0e-140 502.3 345 73.6
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 1.8e-137 493.0 345 77.7
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 9.6e-123 444.1 342 67.0
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 2.4e-121 439.5 343 66.5
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 6.8e-121 438.0 346 67.6
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 1.5e-120 436.8 346 67.1
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 7.8e-117 424.5 345 65.5
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 6.9e-113 411.4 349 62.5
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 5.1e-108 395.2 338 62.1
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.5e-107 393.7 341 60.4
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 1.6e-101 373.6 269 69.1
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 2.7e-101 372.9 315 62.5
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 4.3e-99 365.5 319 60.8
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.6e-98 363.6 355 56.3
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.8e-98 362.8 355 56.6
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 1.2e-96 357.5 348 55.7
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 4.5e-96 355.5 356 55.9
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.0e-95 354.4 343 55.4
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 1.3e-95 354.0 348 54.3
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 2.9e-95 352.8 347 55.3
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 4.9e-95 352.1 349 53.9
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 8.4e-95 351.3 342 56.7
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 2.1e-93 346.7 340 57.1
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 2.7e-93 346.3 260 65.4
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 3.5e-93 345.9 352 53.7
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 6.0e-93 345.1 360 50.8
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 6.0e-93 345.1 256 67.2
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 1.0e-92 344.4 343 54.5
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 3.9e-92 342.4 282 60.3
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 3.3e-91 339.3 349 53.0
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 4.3e-91 339.0 350 51.1
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 5.7e-91 338.6 256 62.9
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 9.6e-91 337.8 315 57.8
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 1.6e-90 337.0 359 52.4
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.4e-89 334.0 350 52.0
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 4.1e-89 332.4 366 49.2
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 5.3e-89 332.0 315 56.8
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 6.9e-89 331.6 350 51.4
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 9.0e-89 331.3 350 51.7
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 1.2e-88 330.9 268 61.2
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.2e-88 330.9 267 61.8
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 3.4e-88 329.3 357 51.5
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 3.4e-88 329.3 350 51.1
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 4.5e-88 328.9 260 62.7
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 5.9e-88 328.6 315 56.2
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.0e-87 327.8 311 55.0
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 3.8e-87 325.9 353 51.0
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 6.5e-87 325.1 268 57.5
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 6.5e-87 325.1 349 51.0
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 8.5e-87 324.7 357 51.0
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 8.5e-87 324.7 308 54.2
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 1.1e-86 324.3 256 62.1
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 3.2e-86 322.8 268 61.2
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 5.5e-86 322.0 336 54.2
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 5.5e-86 322.0 268 60.4
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 2.1e-85 320.1 268 61.2
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 6.1e-85 318.5 268 57.8
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 7.9e-85 318.2 333 53.2
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 1.0e-84 317.8 268 60.4
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.3e-84 317.4 346 52.3
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 1.3e-84 317.4 269 59.9
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 1.8e-84 317.0 269 59.9
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 2.3e-84 316.6 347 51.6
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 3.0e-84 316.2 267 60.3
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 3.9e-84 315.8 268 60.1
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 1.5e-83 313.9 330 51.5
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 2.8e-82 309.7 280 55.4
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 4.8e-82 308.9 268 56.7
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 6.3e-82 308.5 282 53.9
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 6.3e-82 308.5 355 50.4
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 8.2e-82 308.1 314 54.1
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 1.2e-80 304.3 357 46.8
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 1.2e-80 304.3 264 56.4
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 3.4e-80 302.8 346 50.0
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 5.9e-80 302.0 269 56.9
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 7.7e-80 301.6 270 55.9
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 1.0e-79 301.2 262 56.5
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.7e-79 300.4 315 54.6
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.2e-79 300.1 349 47.6
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.1e-78 297.7 270 54.1
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.4e-78 297.4 268 55.6
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 7.2e-78 295.0 356 46.3
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 2.7e-77 293.1 300 52.3
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 1.0e-76 291.2 272 55.1
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 2.3e-76 290.0 322 50.0
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 2.3e-76 290.0 272 54.4
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 3.0e-76 289.7 249 58.6
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 3.9e-76 289.3 345 46.1
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 5.1e-76 288.9 263 54.0
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 1.5e-75 287.3 350 45.7
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 2.2e-74 283.5 235 58.3
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 3.1e-73 279.6 407 43.0
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 1.7e-71 273.9 268 51.9
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 6.5e-71 271.9 232 59.5
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 6.1e-69 265.4 329 45.0
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.1e-67 261.2 269 52.4
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 3.3e-67 259.6 249 54.2
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 9.7e-67 258.1 269 46.5
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.3e-63 247.7 217 56.2
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 2.5e-62 243.4 213 55.4
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 4.4e-59 232.6 266 52.6
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 2.0e-56 223.8 230 47.8
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 1.0e-47 194.9 136 69.1
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.3e-39 167.9 139 57.6
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 3.5e-24 116.7 337 28.8
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 2.9e-18 97.1 253 28.1
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.9e-17 94.4 109 46.8
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 1.2e-16 91.7 76 60.5


User provided reference genes

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