Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20682_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 1.3e-147 526.6 293 100.0
Psat7g199680 Pisum sativum HOM05D010177 ORTHO05D003109 5.7e-92 341.7 318 66.7
Lj3g0011122 Lotus japonicus HOM05D010177 ORTHO05D003109 1.6e-70 270.4 334 58.1
Lalb_Chr19g0135401 Lupinus albus HOM05D010177 ORTHO05D003109 7.5e-68 261.5 311 56.3
Medtr4g046123 Medicago truncatula HOM05D010177 ORTHO05D003109 1.4e-66 257.3 365 50.7
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 3.2e-66 256.1 323 53.9
Glyma.12G108500 Glycine max HOM05D010177 ORTHO05D003109 2.5e-63 246.5 313 53.7
Glyma.U031310 Glycine max HOM05D010177 ORTHO05D003109 4.7e-62 242.3 311 55.6
TPR.G21670 Trifolium pratense HOM05D010177 ORTHO05D003109 1.0e-48 198.0 297 52.9
Phvul.011G112800 Phaseolus vulgaris HOM05D010177 ORTHO05D003109 2.5e-47 193.4 308 46.4
VMungo1127G1338 Vigna mungo HOM05D010177 ORTHO05D003109 3.4e-44 183.0 328 44.8
Ca_01527_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 1.3e-30 137.9 295 43.7
Lalb_Chr14g0366711 Lupinus albus HOM05D010177 ORTHO05D003109 2.1e-30 137.1 304 41.4
Glyma.13G299800 Glycine max HOM05D010177 ORTHO05D003109 3.4e-28 129.8 297 40.7
Psat5g270560 Pisum sativum HOM05D010177 ORTHO05D003109 4.5e-28 129.4 303 43.6
Lalb_Chr22g0356441 Lupinus albus HOM05D010177 ORTHO05D003109 5.8e-28 129.0 299 39.1
VMungo1080G0072 Vigna mungo HOM05D010177 ORTHO05D003109 7.6e-28 128.6 294 39.8
Lj3g0005406 Lotus japonicus HOM05D010177 ORTHO05D003109 3.8e-27 126.3 300 41.7
arahy.Tifrunner.gnm1.ann1.48X98F Arachis hypogaea HOM05D010177 ORTHO05D003109 2.7e-25 120.2 305 40.0
Medtr2g090150 Medicago truncatula HOM05D010177 ORTHO05D003109 7.9e-25 118.6 309 40.8
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 2.5e-23 113.6 320 37.2
Glyma.U031322 Glycine max HOM05D010177 ORTHO05D003109 1.4e-21 107.8 296 35.8
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 6.9e-21 105.5 326 39.9
Cpa.g.sc34.119 Carica papaya HOM05D004441 ORTHO05D003109 1.0e-19 101.7 320 37.2
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 2.9e-19 100.1 281 37.7
Phvul.005G106600 Phaseolus vulgaris HOM05D010177 ORTHO05D003109 2.7e-17 93.6 294 35.7
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 1.4e-16 91.3 315 36.5
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 2.3e-16 90.5 235 35.7
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 2.5e-15 87.0 319 31.7
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 3.3e-15 86.7 311 31.8
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 4.3e-15 86.3 335 34.6
FvH4_6g44980 Fragaria vesca HOM05D010652 ORTHO05D003109 5.7e-15 85.9 336 34.2
Prupe.3G233700 Prunus persica HOM05D010652 ORTHO05D003109 1.3e-14 84.7 363 34.2
CANSAT64G2194 Cannabis sativa HOM05D010652 ORTHO05D003109 1.7e-14 84.3 316 31.3
FAN09G1981 Fragaria x ananassa HOM05D010652 ORTHO05D003109 2.2e-14 84.0 332 31.9
Manes.13G149800 Manihot esculenta HOM05D010652 ORTHO05D003109 8.2e-14 82.0 313 34.2
PGR042G0321 Punica granatum HOM05D004441 ORTHO05D003109 4.1e-13 79.7 327 33.3
TAR627G0319 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.2e-12 78.2 255 32.2
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 1.5e-12 77.8 339 33.0
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 2.6e-12 77.0 320 33.8
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 3.4e-12 76.6 264 38.3
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 5.9e-12 75.9 279 33.7
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 1.0e-11 75.1 319 32.9
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 1.0e-11 75.1 304 31.9
Eucgr.A01789 Eucalyptus grandis HOM05D004441 ORTHO05D003109 1.0e-11 75.1 324 34.3
Rhsim13G0175700 Rhododendron simsii HOM05D004441 ORTHO05D003109 3.8e-11 73.2 312 31.7
Sed0005410 Sechium edule HOM05D002331 ORTHO05D002624 5.0e-11 72.8 310 35.5
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 6.5e-11 72.4 266 36.1
Nitab4.5_0002370g0010 Nicotiana tabacum HOM05D009304 ORTHO05D003109 8.5e-11 72.0 276 33.3
FAN14G1127 Fragaria x ananassa HOM05D010652 ORTHO05D003109 2.5e-10 70.5 340 32.6
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 4.2e-10 69.7 302 32.5
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 4.2e-10 69.7 302 32.5
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 1.2e-09 68.2 278 33.8
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 1.6e-09 67.8 316 34.5
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 2.1e-09 67.4 328 33.2
FAN05G0655 Fragaria x ananassa HOM05D010652 ORTHO05D003109 3.6e-09 66.6 310 32.6
FAN05G4761 Fragaria x ananassa HOM05D010652 ORTHO05D003109 3.6e-09 66.6 310 32.6
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 4.7e-09 66.2 258 32.9
Sabra11G0031800 Salix brachista HOM05D004441 ORTHO05D003109 4.7e-09 66.2 345 31.6
Sc17g0006420 Simmondsia chinensis HOM05D004441 ORTHO05D003109 4.7e-09 66.2 335 29.0
PSO675G8062 Papaver somniferum HOM05D004441 ORTHO05D003109 7.9e-09 65.5 344 31.7
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 7.9e-09 65.5 330 31.8
TPR.G40438 Trifolium pratense HOM05D010177 ORTHO05D003109 7.9e-09 65.5 146 40.4
ECA234G0694 Erigeron canadensis HOM05D009304 ORTHO05D003109 1.0e-08 65.1 205 37.1
Sed0017971 Sechium edule HOM05D002331 ORTHO05D002624 1.0e-08 65.1 262 36.6
PGSC0003DMG400018324 Solanum tuberosum HOM05D009304 ORTHO05D003109 1.8e-08 64.3 328 31.1
DCAR_009737 Daucus carota HOM05D009304 ORTHO05D003109 2.3e-08 63.9 258 35.7
FAN21G2327 Fragaria x ananassa HOM05D004441 ORTHO05D003109 2.3e-08 63.9 326 31.3
Actinidia11074 Actinidia chinensis HOM05D002331 ORTHO05D003109 3.0e-08 63.5 300 34.3
CsaV3_7G004220 Cucumis sativus L. HOM05D032711 ORTHO05D003109 3.0e-08 63.5 256 35.9
CiPaw.03G171700 Carya illinoinensis HOM05D004441 ORTHO05D003109 3.9e-08 63.2 305 28.5
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 3.9e-08 63.2 314 31.5
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 3.9e-08 63.2 307 32.6
ClCG02G001220 Citrullus lanatus HOM05D032711 ORTHO05D003109 8.8e-08 62.0 253 34.8
Dinv01395 Davidia involucrata HOM05D009304 ORTHO05D003109 8.8e-08 62.0 263 32.7
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 8.8e-08 62.0 322 30.4
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 1.5e-07 61.2 309 34.3
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 2.0e-07 60.8 322 30.7
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 3.3e-07 60.1 334 30.5
MBI18_g13205_MAGBIO Magnolia biondii HOM05D004441 ORTHO05D003109 3.3e-07 60.1 307 30.9
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 4.4e-07 59.7 301 32.6
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 4.4e-07 59.7 301 32.6
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 5.7e-07 59.3 276 32.2
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 5.7e-07 59.3 316 32.0
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 9.7e-07 58.5 331 29.3
Hma1.2p1_0875F.1_g231510 Hydrangea macrophylla HOM05D009304 ORTHO05D003109 9.7e-07 58.5 308 35.4
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 2.2e-06 57.4 336 30.1
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 2.8e-06 57.0 269 33.1
Manes.12G087900 Manihot esculenta HOM05D010652 ORTHO05D003109 2.8e-06 57.0 310 28.7
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 6.3e-06 55.8 313 31.0
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 6.3e-06 55.8 336 30.4
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 8.2e-06 55.5 334 28.7
Oeu029188.1 Olea europaea HOM05D004441 ORTHO05D003109 8.2e-06 55.5 322 34.2
PSO541G1557 Papaver somniferum HOM05D004441 ORTHO05D003109 8.2e-06 55.5 345 29.6


User provided reference genes

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