Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 1.8e-219 765.8 422 100.0
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 4.8e-148 528.5 431 70.3
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 1.1e-136 490.7 444 68.0
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 3.0e-134 482.6 402 70.6
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 2.2e-100 370.2 450 55.1
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 6.5e-97 358.6 445 55.5
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 8.3e-92 341.7 478 50.4
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 2.8e-87 326.6 416 52.9
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 2.8e-87 326.6 412 55.1
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 1.2e-85 321.2 489 47.9
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 2.6e-85 320.1 483 48.2
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 8.3e-76 288.5 473 51.2
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 1.0e-73 281.6 473 50.7
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 3.4e-61 240.0 441 44.9
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 2.2e-60 237.3 429 44.1
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 6.4e-60 235.7 429 41.7
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 1.3e-57 228.0 438 42.7
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 7.3e-56 222.2 433 44.1
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 1.1e-54 218.4 422 39.6
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 3.1e-54 216.9 428 38.8
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 4.0e-54 216.5 375 41.3
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 4.2e-51 206.5 426 39.4
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 6.0e-50 202.6 423 39.0
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 9.6e-48 195.3 479 37.0
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 1.4e-46 191.4 398 37.7
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 1.2e-45 188.3 461 37.1
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 2.0e-45 187.6 401 38.2
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 2.6e-45 187.2 368 43.8
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 4.4e-45 186.4 393 40.2
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 9.9e-45 185.3 428 38.1
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 9.9e-45 185.3 410 37.8
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 2.9e-44 183.7 384 39.6
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 3.8e-44 183.3 389 39.6
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 3.2e-43 180.3 371 39.9
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 1.2e-42 178.3 363 39.1
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 1.0e-41 175.3 487 35.5
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 3.9e-41 173.3 383 37.9
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 9.6e-40 168.7 445 33.7
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 2.1e-39 167.5 433 35.1
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 2.1e-39 167.5 429 36.1
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 2.8e-39 167.2 447 34.9
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 2.8e-39 167.2 412 39.3
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 6.2e-39 166.0 392 36.7
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 1.4e-38 164.9 377 36.3
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 1.2e-37 161.8 475 33.9
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 3.4e-37 160.2 453 33.3
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 6.4e-36 156.0 433 36.5
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 4.2e-35 153.3 559 31.5
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 2.7e-34 150.6 481 32.6
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 6.0e-34 149.4 588 30.1
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 1.3e-33 148.3 407 35.4
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 2.3e-33 147.5 329 39.5
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 8.7e-33 145.6 390 33.8
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 1.1e-32 145.2 476 32.4
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 1.1e-32 145.2 462 34.8
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 9.6e-32 142.1 365 32.9
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 1.3e-31 141.7 466 34.3
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 1.6e-31 141.4 463 32.0
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 4.8e-31 139.8 434 32.5
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 1.4e-30 138.3 463 32.0
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 2.4e-30 137.5 463 32.4
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 1.3e-28 131.7 398 32.2
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 2.2e-28 131.0 465 31.4
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 2.2e-28 131.0 414 31.2
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 6.4e-28 129.4 566 28.8
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 6.4e-28 129.4 428 30.8
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 7.1e-27 125.9 588 28.4
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 2.1e-26 124.4 193 46.1
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 3.5e-26 123.6 436 30.7
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 3.5e-26 123.6 259 40.5
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 3.5e-26 123.6 433 30.3
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 6.0e-26 122.9 432 34.0
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 2.3e-25 120.9 397 30.2
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 2.3e-25 120.9 397 30.2
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 5.1e-25 119.8 418 31.3
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 8.7e-25 119.0 392 30.4
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 8.7e-25 119.0 588 27.7
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 1.5e-24 118.2 438 29.7
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 1.5e-24 118.2 465 28.8
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 1.5e-24 118.2 283 38.2
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 2.5e-24 117.5 477 30.4
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 4.3e-24 116.7 201 45.8
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 5.6e-24 116.3 411 32.1
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 7.4e-24 115.9 199 46.2
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 1.3e-23 115.2 344 35.8
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 1.6e-23 114.8 367 31.3
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 1.6e-23 114.8 339 33.9
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 4.8e-23 113.2 588 27.4
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 6.2e-23 112.8 440 28.6
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 2.4e-22 110.9 447 28.2
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 2.4e-22 110.9 483 27.7
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 4.0e-22 110.2 440 27.7
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 9.0e-22 109.0 478 28.0
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 9.0e-22 109.0 187 43.3
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 1.2e-21 108.6 437 28.1
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 1.5e-21 108.2 333 31.5
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 3.4e-21 107.1 306 33.0
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 3.4e-21 107.1 340 32.4
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 4.5e-21 106.7 487 27.7
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 4.5e-21 106.7 489 29.4
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 7.6e-21 105.9 454 29.5
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 1.7e-20 104.8 395 30.1
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 8.4e-20 102.4 481 27.2
Dinv17043 Davidia involucrata HOM05D006297 ORTHO05D007873 7.1e-19 99.4 134 50.0
Dinv43111 Davidia involucrata HOM05D006297 ORTHO05D007873 7.1e-19 99.4 134 50.0
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 7.1e-19 99.4 333 30.9
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 1.2e-18 98.6 135 49.6
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 1.2e-18 98.6 135 49.6
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 2.7e-18 97.4 433 28.4
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 1.3e-17 95.1 311 31.5
Dinv42987 Davidia involucrata HOM05D006297 ORTHO05D007873 5.1e-17 93.2 425 28.2
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 7.4e-16 89.4 306 30.4
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 1.3e-15 88.6 120 46.7
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 1.6e-15 88.2 404 28.0
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 8.2e-15 85.9 478 24.7
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 1.2e-13 82.0 389 28.8
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.5e-13 81.6 107 45.8
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 1.0e-12 79.0 364 29.4
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 1.7e-12 78.2 471 24.6
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.2e-10 72.0 538 25.1
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 1.6e-10 71.6 251 32.3
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 2.7e-10 70.9 383 26.4
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 4.6e-10 70.1 111 45.0
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 5.1e-09 66.6 271 30.3
HanXRQChr11g0340671 Helianthus annuus HOM05D006297 ORTHO05D007873 1.4e-06 58.5 116 38.8
CDE08G1026 Ceratophyllum demersum HOM05D004189 ORTHO05D004092 5.3e-06 56.6 379 24.5


User provided reference genes

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