Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20470_v3 Cicer arietinum L. HOM05D010632 ORTHO05D034590 1.6e-194 682.6 342 100.0
Ca_07183_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 1.5e-104 383.6 297 72.7
Ca_25011_v3 Cicer arietinum L. HOM05D010632 ORTHO05D000013 2.8e-90 336.3 256 69.1
Ca_02147_v3 Cicer arietinum L. HOM05D000017 ORTHO05D007253 8.0e-45 185.3 137 70.8
Ca_28467_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 2.0e-40 170.6 119 81.5
Ca_20021_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 3.5e-40 169.9 308 36.4
Ca_12624_v3 Cicer arietinum L. HOM05D010632 ORTHO05D007253 2.1e-37 160.6 233 39.9
TPR.G26350 Trifolium pratense HOM05D000017 ORTHO05D000013 2.3e-36 157.1 286 35.3
TPR.G1787 Trifolium pratense HOM05D000017 ORTHO05D000013 1.7e-31 141.0 343 33.8
TPR.G31011 Trifolium pratense HOM05D000017 ORTHO05D000013 2.3e-31 140.6 105 60.0
Ca_25007_v3 Cicer arietinum L. HOM05D000017 ORTHO05D025024 4.3e-30 136.3 83 78.3
Medtr2g018850 Medicago truncatula HOM05D000017 ORTHO05D000013 3.7e-26 123.2 176 39.8
Ca_22902_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 2.4e-25 120.6 192 35.9
Medtr8g464080 Medicago truncatula HOM05D023704 ORTHO05D020438 1.6e-24 117.9 193 36.8
TPR.G31961 Trifolium pratense HOM05D000017 ORTHO05D000013 4.6e-24 116.3 99 51.5
arahy.Tifrunner.gnm1.ann1.31P59F Arachis hypogaea HOM05D000017 ORTHO05D000013 7.8e-24 115.5 183 35.5
TPR.G15353 Trifolium pratense HOM05D000017 ORTHO05D000013 1.3e-23 114.8 99 48.5
TPR.G29965 Trifolium pratense HOM05D041876 ORTHO05D000013 8.6e-23 112.1 96 51.0
Lalb_Chr01g0005681 Lupinus albus HOM05D000017 ORTHO05D000013 9.5e-22 108.6 238 33.2
Dinv15044 Davidia involucrata HOM05D008341 ORTHO05D009679 3.6e-21 106.7 244 27.5
Dinv01505 Davidia involucrata HOM05D007975 ORTHO05D010011 8.1e-21 105.5 173 33.5
ECA238G0530 Erigeron canadensis HOM05D000017 ORTHO05D000013 8.9e-20 102.1 242 31.0
TPR.G11122 Trifolium pratense HOM05D000017 ORTHO05D000013 1.5e-19 101.3 88 50.0
Dinv03568 Davidia involucrata HOM05D000017 ORTHO05D009679 2.6e-19 100.5 336 27.4
ECA234G4280 Erigeron canadensis HOM05D000774 ORTHO05D000602 3.4e-19 100.1 100 44.0
Dinv10054 Davidia involucrata HOM05D000017 ORTHO05D000013 1.3e-18 98.2 211 29.9
Dinv35436 Davidia involucrata HOM05D007975 ORTHO05D010011 6.4e-18 95.9 124 37.9
TPR.G18591 Trifolium pratense HOM05D000017 ORTHO05D000013 6.4e-18 95.9 95 49.5
CSS0024128 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-17 95.1 192 29.2
Medtr6g086685 Medicago truncatula HOM05D000017 ORTHO05D000013 1.4e-17 94.7 99 45.5
CSS0015681 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.9e-17 94.4 192 29.2
Dinv26922 Davidia involucrata HOM05D000017 ORTHO05D009679 1.9e-17 94.4 359 24.5
MSTRG.13409 Avicennia marina HOM05D000017 ORTHO05D000013 2.4e-17 94.0 170 32.4
CSS0042409 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.2e-17 93.6 203 29.1
ECA247G3730 Erigeron canadensis HOM05D007464 ORTHO05D009388 5.4e-17 92.8 234 28.2
CSS0015352 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.2e-17 92.0 206 28.2
Dinv10194 Davidia involucrata HOM05D000017 ORTHO05D009679 9.2e-17 92.0 90 43.3
Dinv03558 Davidia involucrata HOM05D007975 ORTHO05D010011 1.2e-16 91.7 139 36.0
CSS0001578 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-16 91.3 203 28.6
CSS0007981 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-16 91.3 203 28.6
CSS0014296 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-16 91.3 203 28.6
CSS0048468 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-16 91.3 193 28.5
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 3.5e-16 90.1 167 29.3
VMungo0540G1299 Vigna mungo HOM05D000017 ORTHO05D000013 7.8e-16 89.0 99 42.4
Ca_12625_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.0e-15 88.6 72 52.8
Ca_18962_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 5.1e-15 86.3 206 33.0
TWI18G0813 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.1e-15 86.3 97 42.3
SHI45280 Sapria himalayana HOM05D000017 ORTHO05D000013 8.7e-15 85.5 177 30.5
VMungo1127G2186 Vigna mungo HOM05D000017 ORTHO05D000013 1.9e-14 84.3 191 29.3
AUR62032729 Chenopodium quinoa HOM05D000861 ORTHO05D007385 4.3e-14 83.2 88 38.6
CSS0024078 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.3e-14 82.4 204 28.4
Lj6g0013797 Lotus japonicus HOM05D000017 ORTHO05D000013 7.3e-14 82.4 207 27.1
Ca_12437_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.6e-13 81.3 84 45.2
Ca_12796_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 1.6e-13 81.3 187 34.8
TWI09G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.1e-13 80.9 99 40.4
TWI75G0917 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.1e-13 80.9 117 35.9
Ca_04570_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 2.8e-13 80.5 194 37.6
TWI31G0342 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.8e-13 80.5 99 40.4
TWI36G0864 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.8e-13 80.5 99 40.4
TWI53G0289 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.8e-13 80.5 99 40.4
TWI75G1336 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.8e-13 80.5 99 40.4
arahy.Tifrunner.gnm1.ann1.XWLB98 Arachis hypogaea HOM05D050139 ORTHO05D010011 3.6e-13 80.1 137 31.4
CSS0024407 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.1e-13 79.0 101 31.7
Ca_29894_v3 Cicer arietinum L. HOM05D059603 ORTHO05D034590 8.1e-13 79.0 67 77.6
CSS0010991 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-12 78.6 95 32.6
CSS0031504 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-12 78.6 95 32.6
CSS0034764 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-12 78.6 95 32.6
CSS0044371 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-12 78.6 95 32.6
CSS0045149 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-12 78.6 95 32.6
CSS0050215 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-12 78.6 95 32.6
TWI31G0287 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.4e-12 77.4 97 40.2
CSS0031758 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.1e-12 77.0 160 29.4
Ca_24156_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 3.1e-12 77.0 234 31.6
TWI36G0951 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.1e-12 77.0 100 38.0
Ca_14755_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 4.0e-12 76.6 226 29.2
TWI15G0147 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.0e-12 76.6 118 33.1
CSS0001678 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.9e-12 75.9 95 31.6
Sopen07g005140 Solanum pennellii HOM05D000017 ORTHO05D000013 9.0e-12 75.5 131 33.6
CSS0003513 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.5e-11 74.7 95 31.6
CSS0003535 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.5e-11 74.7 95 31.6
CSS0000290 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.0e-11 74.3 157 28.0
Ca_06640_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 2.0e-11 74.3 81 46.9
CAN.G311.80 Capsicum annuum HOM05D000460 ORTHO05D012656 5.8e-11 72.8 132 31.8
Dinv09463 Davidia involucrata HOM05D007975 ORTHO05D010011 1.3e-10 71.6 67 46.3
Lj6g0025034 Lotus japonicus HOM05D000017 ORTHO05D000013 2.2e-10 70.9 155 29.7
MBI14_g41771_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.9e-10 70.5 167 26.3
ClCG11G008820 Citrullus lanatus HOM05D000176 ORTHO05D000106 3.8e-10 70.1 155 27.1
ClCG11G010270 Citrullus lanatus HOM05D000017 ORTHO05D000013 3.8e-10 70.1 85 37.6
Dinv01121 Davidia involucrata HOM05D000017 ORTHO05D000013 4.9e-10 69.7 83 37.3
Ca_26697_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 8.4e-10 68.9 195 29.7
HPP92_015904 Vanilla planifolia HOM05D000017 ORTHO05D000013 8.4e-10 68.9 174 25.9
Cc02_g31080 Coffea canephora HOM05D000017 ORTHO05D000013 1.1e-09 68.6 103 28.2
MBI14_g28310_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.9e-09 67.8 148 26.4
Ah.02g115090 Amaranthus hybridus HOM05D000017 ORTHO05D000013 2.4e-09 67.4 206 25.2
MBI16_g06792_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.4e-09 67.4 173 24.3
MBI18_g33668_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.4e-09 67.4 122 31.1
Ca_19105_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 3.2e-09 67.0 82 41.5
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 3.2e-09 67.0 167 26.9
BolC4t26471H Brassica oleracea HOM05D000017 ORTHO05D000013 4.2e-09 66.6 154 25.3
Cc00_g01960 Coffea canephora HOM05D000176 ORTHO05D000106 4.2e-09 66.6 118 26.3
Sopen07g006090 Solanum pennellii HOM05D000017 ORTHO05D012656 7.1e-09 65.9 167 26.9
Dinv28121 Davidia involucrata HOM05D007975 ORTHO05D010011 1.2e-08 65.1 61 44.3
VMungo1383G2253 Vigna mungo HOM05D000017 ORTHO05D000013 1.2e-08 65.1 62 48.4
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-08 64.7 179 27.4
Sopen03g021860 Solanum pennellii HOM05D011435 ORTHO05D012656 2.1e-08 64.3 167 26.9
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-08 63.9 172 26.7
ECA233G0651 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.5e-08 63.5 106 27.4
CANSAT01G2148 Cannabis sativa HOM05D000017 ORTHO05D000013 6.0e-08 62.8 102 30.4
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 6.0e-08 62.8 92 34.8
Dinv11909 Davidia involucrata HOM05D007975 ORTHO05D010011 1.3e-07 61.6 138 30.4
ECA232G3219 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.3e-07 61.6 95 28.4
ECA234G2417 Erigeron canadensis HOM05D000015 ORTHO05D000270 1.3e-07 61.6 95 28.4
ECA238G1198 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.3e-07 61.6 95 28.4
ECA240G4803 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.3e-07 61.6 95 28.4
ECA246G2582 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.3e-07 61.6 95 28.4
ECA247G2993 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.3e-07 61.6 95 28.4
ECA248G3666 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.3e-07 61.6 95 28.4
Sopen07g027950 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-07 61.6 97 33.0
Ca_05035_v3 Cicer arietinum L. HOM05D010632 ORTHO05D012807 1.7e-07 61.2 152 33.6
ECA233G2665 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.7e-07 61.2 95 28.4
ECA240G1324 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.7e-07 61.2 95 28.4
ECA233G4715 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.3e-07 60.8 95 28.4
ECA234G3217 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.3e-07 60.8 135 23.7
ECA248G1220 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.3e-07 60.8 95 29.5
Os06g0661000 Oryza sativa ssp. japonica HOM05D024868 ORTHO05D020927 2.3e-07 60.8 163 26.4
ECA236G2578 Erigeron canadensis HOM05D001306 ORTHO05D001159 3.0e-07 60.5 95 28.4
ECA248G2732 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.0e-07 60.5 95 28.4
QL03p010991 Quercus lobata HOM05D000017 ORTHO05D000013 3.0e-07 60.5 88 33.0
CANSAT80G1128 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-07 60.1 97 33.0
ECA233G3854 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.9e-07 60.1 136 25.0
ECA236G3469 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.9e-07 60.1 95 27.4
ECA238G0910 Erigeron canadensis HOM05D000017 ORTHO05D000106 3.9e-07 60.1 95 27.4
ECA240G2795 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.1e-07 59.7 95 27.4
ECA246G2772 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.1e-07 59.7 95 28.4
MBI18_g12426_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 5.1e-07 59.7 94 31.9
AL7G47640 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 6.6e-07 59.3 119 26.1
ECA247G3508 Erigeron canadensis HOM05D001162 ORTHO05D000013 6.6e-07 59.3 136 25.7
CANSAT80G0510 Cannabis sativa HOM05D000017 ORTHO05D000013 8.7e-07 58.9 97 33.0
ECA234G0932 Erigeron canadensis HOM05D000017 ORTHO05D000013 8.7e-07 58.9 103 27.2
ECA240G4628 Erigeron canadensis HOM05D000017 ORTHO05D000013 8.7e-07 58.9 95 30.5
MBI05_g12020_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 8.7e-07 58.9 100 30.0
AL8G22950 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 1.1e-06 58.5 153 25.5
Duzib268G0534 Durio zibethinus HOM05D000017 ORTHO05D000013 1.1e-06 58.5 278 21.9
ECA232G4807 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.1e-06 58.5 95 28.4
ECA240G1726 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.1e-06 58.5 257 22.6
MBI14_g30478_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.1e-06 58.5 92 31.5
Os04g0195400 Oryza sativa ssp. japonica HOM05D024868 ORTHO05D020927 1.1e-06 58.5 163 25.2
Sed0023877 Sechium edule HOM05D000017 ORTHO05D000013 1.1e-06 58.5 99 31.3
CDE02G1797 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 1.5e-06 58.2 127 26.8
ECA246G3637 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.9e-06 57.8 95 27.4
Dinv06450 Davidia involucrata HOM05D008341 ORTHO05D009679 2.5e-06 57.4 60 40.0
MBI11_g02885_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.5e-06 57.4 161 23.6
AL7G47630 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 3.3e-06 57.0 155 23.9
CANSAT64G0129 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-06 57.0 167 24.0
ECA233G5270 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.3e-06 57.0 95 27.4
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 3.3e-06 57.0 109 28.4
Peaxi162Scf00319g00027 Petunia axillaris HOM05D005268 ORTHO05D011324 3.3e-06 57.0 335 24.2
ECA238G0187 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.3e-06 56.6 95 27.4
TAR118G0002 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.3e-06 56.6 125 26.4
TAR286G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.3e-06 56.6 125 26.4
TAR640G0005 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.3e-06 56.6 125 26.4
TAR651G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.3e-06 56.6 117 29.9
CANSAT54G1378 Cannabis sativa HOM05D000017 ORTHO05D000013 5.6e-06 56.2 140 26.4
TAR059G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 5.6e-06 56.2 96 28.1
CANSAT11G1736 Cannabis sativa HOM05D000017 ORTHO05D000013 7.3e-06 55.8 125 24.8
ECA248G3032 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.3e-06 55.8 95 26.3
MBI05_g18602_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 7.3e-06 55.8 92 28.3
MBI16_g37198_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 7.3e-06 55.8 120 25.8
PSO210G6469 Papaver somniferum HOM05D000017 ORTHO05D000013 7.3e-06 55.8 104 29.8
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 7.3e-06 55.8 97 25.8
CANSAT11G0224 Cannabis sativa HOM05D000017 ORTHO05D000013 9.6e-06 55.5 71 33.8
CANSAT54G0192 Cannabis sativa HOM05D000017 ORTHO05D000013 9.6e-06 55.5 122 27.9
ECA232G0365 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.6e-06 55.5 95 26.3
ECA246G4557 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.6e-06 55.5 94 30.9
MBI02_g19392_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 9.6e-06 55.5 91 29.7
PSO541G1822 Papaver somniferum HOM05D000017 ORTHO05D000013 9.6e-06 55.5 140 26.4
SHI10871 Sapria himalayana HOM05D002876 ORTHO05D000013 9.6e-06 55.5 96 28.1


User provided reference genes

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