Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 9.8e-77 290.0 145 100.0
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 2.3e-65 252.3 135 91.9
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.1e-64 250.0 142 85.9
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.1e-62 243.4 135 85.9
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 6.8e-62 240.7 135 83.7
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 6.8e-62 240.7 135 85.9
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 4.4e-61 238.0 135 85.2
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 7.5e-61 237.3 136 83.8
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 7.5e-61 237.3 135 84.4
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.7e-60 236.1 135 83.7
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 2.2e-60 235.7 135 84.4
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 3.7e-60 235.0 135 82.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 4.1e-59 231.5 135 79.3
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 7.1e-59 230.7 139 78.4
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 7.1e-59 230.7 135 81.5
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 9.2e-59 230.3 135 82.2
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-58 229.9 135 81.5
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.6e-58 229.6 135 81.5
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 2.7e-58 228.8 135 82.2
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.7e-58 228.8 135 81.5
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 3.5e-58 228.4 135 80.7
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.5e-58 228.4 135 80.7
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 4.6e-58 228.0 138 76.8
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 6.0e-58 227.6 135 80.0
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 6.0e-58 227.6 136 78.7
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 7.8e-58 227.3 135 80.7
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 7.8e-58 227.3 135 80.7
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.3e-57 226.5 132 82.6
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.7e-57 226.1 135 79.3
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 2.3e-57 225.7 135 78.5
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 2.3e-57 225.7 135 80.7
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 3.0e-57 225.3 135 78.5
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 3.0e-57 225.3 135 81.5
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 3.9e-57 224.9 135 77.0
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 3.9e-57 224.9 135 79.3
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 5.1e-57 224.6 135 78.5
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 5.1e-57 224.6 135 80.7
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 5.1e-57 224.6 135 80.7
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 5.1e-57 224.6 135 77.8
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 6.6e-57 224.2 135 80.7
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 8.6e-57 223.8 135 78.5
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.1e-56 223.4 135 78.5
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.1e-56 223.4 134 77.6
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.9e-56 222.6 136 78.7
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.9e-56 222.6 135 79.3
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.5e-56 222.2 135 78.5
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.5e-56 222.2 134 76.9
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 3.3e-56 221.9 135 80.0
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 9.5e-56 220.3 137 79.6
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 9.5e-56 220.3 135 76.3
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 9.5e-56 220.3 134 78.4
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.2e-55 219.9 135 77.8
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 2.1e-55 219.2 135 77.8
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 3.6e-55 218.4 135 79.3
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 4.7e-55 218.0 135 73.3
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 4.7e-55 218.0 135 78.5
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 8.1e-55 217.2 136 75.7
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 8.1e-55 217.2 136 73.5
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.1e-54 216.9 135 76.3
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.8e-54 216.1 135 75.6
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.8e-54 216.1 136 75.0
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.8e-54 216.1 135 74.8
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.8e-54 216.1 135 76.3
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 2.4e-54 215.7 135 78.5
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 3.1e-54 215.3 135 75.6
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 4.0e-54 214.9 135 76.3
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 5.2e-54 214.5 135 76.3
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 6.8e-54 214.2 135 76.3
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 6.8e-54 214.2 134 74.6
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 8.9e-54 213.8 136 75.0
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.2e-53 213.4 135 74.1
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.2e-53 213.4 135 73.3
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.5e-53 213.0 135 75.6
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 3.4e-53 211.8 135 72.6
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 3.4e-53 211.8 135 72.6
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.4e-53 211.8 135 74.1
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 3.4e-53 211.8 135 74.8
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 4.4e-53 211.5 135 75.6
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 5.8e-53 211.1 135 73.3
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 5.8e-53 211.1 135 73.3
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 5.8e-53 211.1 135 74.1
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 7.6e-53 210.7 135 72.6
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 9.9e-53 210.3 135 73.3
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.3e-52 209.9 135 73.3
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 2.2e-52 209.1 135 74.8
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.2e-52 209.1 134 73.1
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.2e-52 209.1 135 76.3
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.2e-52 209.1 135 71.9
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 2.9e-52 208.8 135 72.6
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 3.8e-52 208.4 135 71.9
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 4.9e-52 208.0 134 73.1
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 8.4e-52 207.2 135 70.4
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.1e-51 206.8 135 70.4
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.1e-51 206.8 135 73.3
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.4e-51 206.5 134 73.9
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.7e-49 199.5 135 68.9
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 1.7e-49 199.5 135 70.4
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 2.3e-49 199.1 133 70.7
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.8e-44 181.8 139 59.7
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 6.6e-41 171.0 142 61.3
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 5.6e-40 167.9 138 56.5
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 7.3e-40 167.5 134 57.5
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.1e-39 166.0 137 54.7
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 3.6e-39 165.2 140 60.0
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.8e-38 162.9 136 53.7
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 7.9e-34 147.5 142 54.2
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.5e-21 106.7 65 70.8
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 5.5e-19 98.2 139 37.4
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 5.1e-17 91.7 100 51.0
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 4.8e-15 85.1 135 39.3
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 5.3e-14 81.6 129 33.3
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.0e-13 79.7 150 28.7
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 4.5e-13 78.6 44 81.8
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 9.4e-11 70.9 115 33.9


User provided reference genes

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