Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 3.3e-44 181.4 97 100.0
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 1.3e-35 152.9 97 81.4
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 1.7e-32 142.5 94 83.0
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 2.2e-32 142.1 97 76.3
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 1.1e-31 139.8 97 76.3
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 1.1e-31 139.8 97 75.3
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 2.1e-30 135.6 93 72.0
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 1.8e-29 132.5 91 73.6
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 3.7e-27 124.8 94 72.3
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 3.7e-27 124.8 94 72.3
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 2.9e-24 115.2 97 63.9
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 3.8e-24 114.8 97 66.0
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 3.8e-24 114.8 93 67.7
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 2.4e-23 112.1 97 62.9
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 1.2e-22 109.8 95 62.1
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 1.2e-22 109.8 97 61.9
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 1.2e-22 109.8 97 62.9
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.0e-21 106.7 87 62.1
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 1.3e-21 106.3 84 65.5
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 1.3e-21 106.3 97 58.8
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.3e-21 106.3 91 61.5
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.3e-21 106.3 91 61.5
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 1.3e-21 106.3 91 60.4
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.8e-21 105.9 91 58.2
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.8e-21 105.9 91 61.5
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 5.1e-21 104.4 91 61.5
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 5.1e-21 104.4 97 57.7
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 5.1e-21 104.4 92 58.7
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 8.7e-21 103.6 77 68.8
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 1.1e-20 103.2 84 61.9
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 1.9e-20 102.4 89 60.7
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 2.5e-20 102.1 92 60.9
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 2.5e-20 102.1 92 60.9
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 2.5e-20 102.1 89 58.4
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 4.3e-20 101.3 92 60.9
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 5.6e-20 100.9 92 59.8
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 9.6e-20 100.1 88 59.1
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 1.3e-19 99.8 97 59.8
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 1.6e-19 99.4 91 57.1
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 2.1e-19 99.0 87 59.8
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 3.7e-19 98.2 88 59.1
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 3.7e-19 98.2 88 61.4
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 4.8e-19 97.8 89 58.4
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 4.8e-19 97.8 89 58.4
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 8.2e-19 97.1 90 58.9
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 8.2e-19 97.1 92 56.5
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 8.2e-19 97.1 89 55.1
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 8.2e-19 97.1 96 56.2
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 1.1e-18 96.7 90 56.7
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 1.4e-18 96.3 88 55.7
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 1.4e-18 96.3 72 68.1
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.8e-18 95.9 84 59.5
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.8e-18 95.9 90 57.8
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.8e-18 95.9 90 57.8
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.4e-18 95.5 97 56.7
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 3.1e-18 95.1 89 60.7
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 3.1e-18 95.1 91 54.9
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 4.0e-18 94.7 97 56.7
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 4.0e-18 94.7 91 59.3
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 9.0e-18 93.6 90 56.7
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.2e-17 93.2 84 56.0
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 1.2e-17 93.2 92 58.7
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.5e-17 92.8 97 55.7
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 2.0e-17 92.4 89 57.3
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 2.0e-17 92.4 82 56.1
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 3.4e-17 91.7 89 56.2
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 5.8e-17 90.9 91 53.8
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 4.9e-16 87.8 89 55.1
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 6.5e-16 87.4 90 56.7
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 8.4e-16 87.0 84 52.4
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 8.4e-16 87.0 87 52.9
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 1.4e-15 86.3 79 60.8
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 1.4e-15 86.3 90 54.4
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 2.5e-15 85.5 92 51.1
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 2.5e-15 85.5 79 57.0
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 3.2e-15 85.1 80 56.2
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 7.1e-15 84.0 84 54.8
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 9.3e-15 83.6 89 49.4
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 9.3e-15 83.6 80 55.0
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 9.3e-15 83.6 89 49.4
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 9.3e-15 83.6 89 51.7
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.2e-14 83.2 82 53.7
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 1.6e-14 82.8 78 59.0
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 1.6e-14 82.8 69 62.3
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 2.1e-14 82.4 76 59.2
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 2.1e-14 82.4 76 59.2
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 1.8e-13 79.3 79 50.6
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 1.8e-13 79.3 79 53.2
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 6.7e-13 77.4 77 55.8
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 5.7e-12 74.3 108 44.4
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 6.3e-11 70.9 86 43.0
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 1.1e-10 70.1 64 53.1
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 1.1e-10 70.1 61 59.0
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 2.4e-10 68.9 78 52.6
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 2.4e-10 68.9 48 64.6
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 3.1e-10 68.6 64 54.7
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 4.1e-10 68.2 75 49.3
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 9.0e-10 67.0 82 46.3
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 1.2e-09 66.6 78 51.3
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 2.6e-09 65.5 91 46.2
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 3.4e-09 65.1 77 49.4
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 4.5e-09 64.7 61 54.1
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 1.3e-08 63.2 86 43.0
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 3.8e-08 61.6 78 47.4
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 6.5e-08 60.8 66 53.0
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 4.2e-07 58.2 67 46.3


User provided reference genes

Program Settings