Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 9.3e-300 1032.7 503 100.0
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.8e-223 779.2 513 72.3
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 9.5e-220 766.9 515 72.8
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.1e-207 726.9 479 73.5
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.2e-203 713.4 514 67.9
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.5e-193 679.9 528 64.6
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 1.4e-191 673.3 510 66.9
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 1.5e-188 663.3 528 63.3
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 5.6e-188 661.4 528 63.3
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 9.9e-185 650.6 530 62.6
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 4.9e-184 648.3 534 62.2
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.1e-183 647.1 502 62.5
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 2.4e-183 646.0 509 63.1
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.2e-183 645.6 510 63.1
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.2e-183 645.6 509 63.1
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.2e-183 645.6 509 63.1
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 2.1e-182 642.9 513 62.4
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.0e-181 640.6 510 62.9
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.0e-181 640.6 513 62.4
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 8.7e-181 637.5 517 61.7
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 2.5e-180 636.0 505 60.6
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 7.4e-180 634.4 521 61.4
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 1.3e-179 633.6 508 62.2
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 6.2e-179 631.3 495 63.0
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 8.1e-179 630.9 512 61.5
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.1e-178 630.6 513 61.4
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.1e-178 630.6 507 61.7
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.8e-178 629.8 513 61.4
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 4.0e-178 628.6 513 61.2
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 5.3e-178 628.2 500 62.4
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 3.4e-177 625.5 510 59.6
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 3.4e-177 625.5 518 61.0
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 5.8e-177 624.8 523 59.3
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 9.9e-177 624.0 508 60.4
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 9.9e-177 624.0 509 61.5
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 9.9e-177 624.0 506 60.5
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 2.2e-176 622.9 503 61.6
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 2.2e-176 622.9 511 61.3
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 2.9e-176 622.5 492 62.6
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 2.9e-176 622.5 504 60.9
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 4.9e-176 621.7 520 60.6
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.1e-175 620.5 512 60.4
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.1e-175 620.5 497 61.0
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 2.4e-175 619.4 497 61.0
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 2.4e-175 619.4 505 62.4
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 3.2e-175 619.0 512 60.2
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 4.2e-175 618.6 510 60.0
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 1.2e-174 617.1 509 59.9
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 2.1e-174 616.3 494 61.1
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 4.6e-174 615.1 508 60.8
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 7.9e-174 614.4 514 59.5
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 5.1e-173 611.7 503 60.0
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 1.1e-172 610.5 513 60.8
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 7.4e-172 607.8 490 61.2
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 9.6e-172 607.4 506 58.5
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.6e-171 606.7 507 58.8
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 2.1e-171 606.3 506 57.9
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 2.1e-171 606.3 506 58.9
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 2.8e-171 605.9 510 59.6
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 2.8e-171 605.9 512 58.2
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 2.8e-171 605.9 507 58.6
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 6.2e-171 604.7 519 59.2
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 1.4e-170 603.6 511 58.7
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.4e-170 603.6 523 57.2
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 3.1e-170 602.4 506 58.7
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 4.0e-170 602.1 537 57.2
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 6.9e-170 601.3 483 59.6
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.2e-169 600.5 507 58.4
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 2.6e-169 599.4 504 57.7
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 4.5e-169 598.6 505 58.2
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 5.8e-169 598.2 500 59.6
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.0e-168 597.4 504 58.5
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.0e-168 597.4 501 60.1
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.0e-168 597.4 501 57.9
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 1.3e-168 597.0 504 58.5
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 1.3e-168 597.0 513 57.7
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 2.9e-168 595.9 486 61.3
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 3.8e-168 595.5 502 58.2
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 1.4e-167 593.6 522 56.3
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 2.1e-166 589.7 506 57.5
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 3.5e-166 589.0 509 60.1
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.3e-165 587.0 505 55.2
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.3e-165 587.0 508 59.1
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.0e-165 585.9 505 58.2
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.0e-165 585.9 505 58.2
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 3.9e-165 585.5 506 57.1
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 3.9e-165 585.5 506 57.1
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 8.7e-165 584.3 506 59.7
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 2.4e-162 576.2 579 51.5
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 2.7e-158 562.8 458 60.3
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.6e-158 562.0 505 55.8
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 4.3e-156 555.4 494 54.9
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 4.1e-154 548.9 490 56.9
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.7e-152 543.5 523 53.0
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.6e-150 537.0 406 67.5
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 2.2e-147 526.6 432 58.3
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 2.2e-147 526.6 433 60.3
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.2e-145 520.8 353 68.6
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.0e-144 517.7 506 54.3
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 9.4e-143 511.1 514 51.6
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 4.5e-137 492.3 369 64.2
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.0e-133 481.1 509 48.7
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 6.6e-112 408.7 261 73.2
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.6e-105 387.5 415 47.5
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 8.6e-104 381.7 376 48.7
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 3.1e-101 373.2 456 44.3
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 6.8e-101 372.1 380 48.2
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.2e-89 334.7 390 43.6
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.1e-63 248.4 168 67.3
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 1.8e-45 188.0 120 73.3
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.2e-44 185.3 162 52.5
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 4.8e-30 136.7 306 30.4
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 2.0e-23 114.8 134 46.3
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 4.4e-23 113.6 109 48.6
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 7.0e-13 79.7 56 58.9
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 9.1e-13 79.3 91 41.8
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 5.5e-10 70.1 110 30.0
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 5.5e-10 70.1 92 33.7
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 6.1e-09 66.6 58 39.7
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 2.6e-07 61.2 75 42.7
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 2.6e-07 61.2 75 42.7
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 2.6e-07 61.2 75 42.7


User provided reference genes

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