Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.4e-119 432.2 216 100.0
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 3.0e-90 335.5 213 78.9
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 8.3e-88 327.4 215 78.1
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 7.2e-84 314.3 210 77.1
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 9.2e-71 270.8 210 64.3
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 2.5e-60 236.1 210 58.1
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 3.1e-58 229.2 210 55.7
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 3.4e-57 225.7 211 55.9
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.2e-56 223.0 209 56.5
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 2.2e-56 223.0 210 56.2
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 2.2e-56 223.0 210 55.7
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 1.9e-55 219.9 211 54.5
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 4.1e-55 218.8 211 53.6
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.0e-53 214.2 210 53.3
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 1.3e-53 213.8 212 53.8
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 1.3e-53 213.8 245 50.6
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 3.0e-53 212.6 212 53.8
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 5.1e-53 211.8 210 53.8
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 2.5e-52 209.5 211 52.6
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 1.3e-45 187.2 211 48.8
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 1.9e-44 183.3 220 49.1
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 5.6e-44 181.8 210 48.6
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 9.6e-44 181.0 216 47.2
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 4.7e-43 178.7 218 46.8
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 8.1e-43 177.9 210 46.2
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 1.8e-42 176.8 210 43.8
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 2.4e-42 176.4 222 47.7
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 5.2e-42 175.3 210 46.7
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 6.9e-42 174.9 210 45.2
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 8.9e-42 174.5 214 46.3
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 8.9e-42 174.5 217 43.8
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 1.2e-41 174.1 223 46.6
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 1.5e-41 173.7 231 43.7
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.5e-41 173.7 216 45.4
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 2.0e-41 173.3 210 46.2
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 9.9e-41 171.0 215 46.0
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 9.9e-41 171.0 215 45.6
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 9.9e-41 171.0 230 43.9
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 2.2e-40 169.9 239 42.7
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 2.2e-40 169.9 209 46.9
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 3.8e-40 169.1 211 43.6
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 3.8e-40 169.1 210 45.7
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 4.9e-40 168.7 215 45.1
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 4.9e-40 168.7 214 45.8
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 6.4e-40 168.3 210 43.8
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 6.4e-40 168.3 210 41.9
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 8.4e-40 167.9 238 41.6
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 1.1e-39 167.5 210 42.9
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 1.4e-39 167.2 214 45.3
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 1.4e-39 167.2 210 44.3
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.9e-39 166.8 210 43.8
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 2.4e-39 166.4 243 41.6
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 5.4e-39 165.2 210 43.3
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 7.1e-39 164.9 210 43.3
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 2.1e-38 163.3 239 40.2
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 2.1e-38 163.3 248 38.7
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 4.6e-38 162.2 241 40.7
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 4.6e-38 162.2 216 43.1
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 4.6e-38 162.2 210 43.8
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 4.6e-38 162.2 210 42.9
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 6.0e-38 161.8 215 43.7
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 6.0e-38 161.8 215 44.2
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 6.0e-38 161.8 245 38.8
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 6.0e-38 161.8 216 43.1
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 7.8e-38 161.4 231 42.9
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.7e-37 160.2 208 42.8
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 1.7e-37 160.2 208 43.3
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.3e-37 159.8 216 42.6
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 3.9e-37 159.1 219 41.6
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 3.9e-37 159.1 222 43.7
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 3.9e-37 159.1 241 38.6
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 5.1e-37 158.7 189 48.7
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 6.6e-37 158.3 212 43.4
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 8.7e-37 157.9 213 44.1
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 1.1e-36 157.5 210 41.4
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.5e-36 157.1 208 45.2
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 1.9e-36 156.8 184 45.7
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 2.5e-36 156.4 184 45.1
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 3.6e-35 152.5 184 44.0
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 6.2e-35 151.8 195 43.1
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 6.2e-35 151.8 212 42.0
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 1.1e-34 151.0 184 43.5
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 1.1e-34 151.0 184 43.5
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.1e-34 151.0 195 41.5
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 1.4e-34 150.6 209 42.6
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 4.0e-34 149.1 216 41.7
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 9.0e-34 147.9 214 41.1
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 3.8e-32 142.5 125 56.8
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 1.1e-31 141.0 188 43.1
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 1.1e-31 141.0 184 42.9
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 5.4e-31 138.7 211 39.8
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 2.1e-30 136.7 214 39.3
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 4.6e-30 135.6 214 41.6
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 5.1e-29 132.1 219 38.8
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 6.7e-29 131.7 198 41.9
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 2.5e-28 129.8 228 39.5
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 3.3e-28 129.4 190 40.5
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 4.3e-28 129.0 217 35.9
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 3.6e-27 125.9 189 37.6
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 4.8e-27 125.6 231 37.7
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 4.0e-26 122.5 198 38.9
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 9.3e-23 111.3 68 69.1
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 1.6e-19 100.5 102 49.0
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.6e-14 84.0 219 34.2
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 2.7e-14 83.2 211 34.1
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.8e-13 80.5 123 35.0
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 8.2e-11 71.6 130 34.6
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.5e-09 67.4 181 29.3
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 1.0e-08 64.7 181 27.6
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 1.3e-08 64.3 43 69.8
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.5e-08 61.6 83 37.3
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.1e-07 61.2 137 29.2
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.9e-07 60.5 83 38.6
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.5e-07 60.1 81 35.8
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.2e-07 59.7 81 35.8
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 3.6e-06 56.2 76 38.2
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.6e-06 55.8 81 34.6
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 4.6e-06 55.8 128 30.5


User provided reference genes

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