Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 6.5e-96 354.0 170 100.0
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 2.6e-81 305.4 170 83.5
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.3e-80 303.1 170 83.5
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.7e-80 302.8 170 84.1
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 2.9e-80 302.0 170 81.8
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 9.4e-79 297.0 170 80.6
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 2.0e-76 289.3 170 78.8
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 3.7e-75 285.0 165 78.8
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 3.1e-74 282.0 165 77.6
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 5.3e-74 281.2 171 78.4
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 7.0e-74 280.8 165 75.8
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 9.1e-74 280.4 173 75.1
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 4.5e-73 278.1 164 76.8
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.3e-72 276.6 165 75.2
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.7e-72 276.2 165 76.4
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 3.8e-72 275.0 168 76.2
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.5e-72 274.2 165 75.8
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.5e-72 274.2 165 75.8
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 3.2e-71 271.9 158 75.9
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 5.5e-71 271.2 159 77.4
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 7.2e-71 270.8 171 76.6
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 9.4e-71 270.4 170 76.5
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 9.4e-71 270.4 169 76.9
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.2e-70 270.0 166 74.1
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 2.1e-70 269.2 171 75.4
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 2.1e-70 269.2 169 72.8
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.7e-70 268.9 163 75.5
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 3.6e-70 268.5 170 72.4
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 1.0e-69 266.9 165 73.9
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 1.4e-69 266.5 170 71.2
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 1.4e-69 266.5 166 72.3
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.8e-69 266.2 170 71.8
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.8e-69 266.2 165 73.3
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 4.0e-69 265.0 168 72.0
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 6.8e-69 264.2 158 77.2
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 1.5e-68 263.1 165 73.3
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 1.5e-68 263.1 166 72.9
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.0e-68 262.7 171 70.8
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 4.4e-68 261.5 168 72.0
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 4.4e-68 261.5 168 72.6
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 4.4e-68 261.5 165 72.7
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 5.7e-68 261.2 167 74.3
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 9.8e-68 260.4 163 72.4
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 3.7e-67 258.5 170 69.4
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.4e-66 256.5 171 67.8
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.8e-66 256.1 165 70.3
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 5.4e-66 254.6 166 70.5
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 7.0e-66 254.2 166 67.5
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.2e-65 253.4 163 71.2
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 2.0e-65 252.7 165 70.9
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 3.5e-65 251.9 166 69.9
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 5.9e-65 251.1 165 72.7
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.0e-64 250.4 163 70.6
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 1.7e-64 249.6 164 67.1
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.8e-64 248.4 166 67.5
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 8.5e-64 247.3 168 68.5
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.5e-63 246.5 168 69.0
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 4.2e-63 245.0 166 67.5
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 9.5e-63 243.8 166 69.3
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 9.5e-63 243.8 166 69.3
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 9.5e-63 243.8 165 69.7
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 1.6e-62 243.0 165 68.5
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 4.7e-62 241.5 165 67.3
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 6.1e-62 241.1 146 77.4
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 8.0e-62 240.7 163 66.9
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 5.2e-61 238.0 165 66.7
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 5.2e-61 238.0 164 65.2
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 6.8e-61 237.7 164 65.2
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 2.6e-60 235.7 168 66.7
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 7.5e-60 234.2 163 66.3
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 1.3e-59 233.4 168 66.1
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.7e-59 233.0 169 65.7
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 2.2e-59 232.6 166 62.7
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 2.8e-59 232.3 165 66.7
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 6.3e-59 231.1 160 66.9
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 3.1e-58 228.8 158 65.8
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 4.1e-58 228.4 158 65.8
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 5.4e-58 228.0 158 67.1
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 7.0e-58 227.6 169 67.5
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 1.2e-57 226.9 156 70.5
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 1.6e-57 226.5 158 66.5
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 1.6e-57 226.5 165 67.3
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 2.7e-57 225.7 165 66.7
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 3.5e-57 225.3 158 65.8
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 4.5e-57 224.9 162 66.7
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 4.7e-54 214.9 142 69.0
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.5e-52 209.9 163 60.7
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 4.4e-52 208.4 167 59.3
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 1.7e-51 206.5 139 67.6
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.7e-51 206.5 164 59.1
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 3.7e-51 205.3 167 59.9
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 1.1e-50 203.8 140 66.4
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 1.4e-50 203.4 139 66.9
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 3.2e-50 202.2 167 57.5
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 1.2e-49 200.3 164 59.8
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.2e-49 200.3 164 57.3
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 1.7e-48 196.4 169 58.0
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 5.0e-48 194.9 129 69.8
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 8.6e-48 194.1 129 71.3
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 2.5e-47 192.6 161 52.8
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 6.2e-46 188.0 166 56.6
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 4.4e-44 181.8 170 53.5
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 5.8e-44 181.4 174 54.0
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.7e-43 179.9 164 48.8
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 2.4e-42 176.0 165 50.9
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.2e-42 175.6 118 67.8
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.6e-41 173.3 156 55.1
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.7e-40 169.9 171 48.0
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 8.1e-38 161.0 143 52.4
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 1.5e-36 156.8 166 42.2
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 7.8e-33 144.4 89 74.2
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.1e-31 140.6 160 45.0
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 2.5e-31 139.4 166 44.0
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 2.8e-30 136.0 85 74.1
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 6.2e-30 134.8 130 53.8
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 2.7e-25 119.4 109 56.0
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 1.3e-16 90.5 152 36.2
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 4.8e-14 82.0 51 64.7
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 1.1e-10 70.9 42 73.8
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 1.2e-09 67.4 117 35.9


User provided reference genes

Program Settings