Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 2.2e-75 285.4 132 100.0
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 1.1e-50 203.4 168 61.3
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.1e-50 203.4 168 58.9
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 1.0e-48 196.8 170 59.4
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 3.0e-48 195.3 168 58.3
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 1.1e-45 186.8 175 58.3
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.9e-39 166.0 168 51.8
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 6.3e-38 161.0 168 51.2
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.4e-37 159.8 168 51.2
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 3.1e-37 158.7 170 51.2
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 2.0e-36 156.0 166 48.8
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 1.0e-35 153.7 168 49.4
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 1.3e-35 153.3 166 48.2
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.3e-35 153.3 167 47.3
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 1.3e-35 153.3 168 48.8
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.3e-35 153.3 168 50.0
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.3e-35 153.3 168 50.0
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.7e-35 152.9 166 48.2
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 1.7e-35 152.9 169 49.7
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.9e-34 149.4 166 48.8
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 3.2e-34 148.7 164 48.8
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 3.2e-34 148.7 167 47.3
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 9.3e-34 147.1 166 45.2
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 2.7e-33 145.6 169 45.6
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 2.7e-33 145.6 165 47.9
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 3.6e-33 145.2 165 46.7
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 1.3e-32 143.3 165 46.1
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.3e-32 143.3 165 47.3
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 1.8e-32 142.9 163 48.5
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 2.3e-32 142.5 166 44.0
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.3e-32 142.5 165 47.3
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 3.0e-32 142.1 163 49.7
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 3.0e-32 142.1 166 45.8
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 3.9e-32 141.7 169 46.7
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 3.9e-32 141.7 165 45.5
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 5.1e-32 141.4 169 45.0
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 5.1e-32 141.4 168 45.2
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 8.7e-32 140.6 164 45.7
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 8.7e-32 140.6 167 46.7
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 8.7e-32 140.6 168 45.8
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.9e-31 139.4 167 43.7
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.9e-31 139.4 165 46.1
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.9e-31 139.4 165 46.1
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 1.9e-31 139.4 165 47.9
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 2.5e-31 139.0 168 47.0
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 2.5e-31 139.0 168 47.0
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 3.3e-31 138.7 168 47.0
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 5.7e-31 137.9 157 48.4
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 5.7e-31 137.9 165 45.5
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 5.7e-31 137.9 158 44.3
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 5.7e-31 137.9 158 44.3
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 9.7e-31 137.1 168 43.5
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 9.7e-31 137.1 168 43.5
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 9.7e-31 137.1 167 43.1
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 2.2e-30 136.0 165 44.8
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 4.8e-30 134.8 164 45.1
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 8.2e-30 134.0 166 43.4
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 8.2e-30 134.0 163 49.7
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.1e-29 133.7 167 45.5
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 1.1e-29 133.7 167 46.1
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 1.4e-29 133.3 163 49.1
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.8e-29 132.9 166 44.6
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 2.4e-29 132.5 169 43.8
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 2.4e-29 132.5 166 42.2
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 2.4e-29 132.5 165 43.6
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 2.4e-29 132.5 163 46.6
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 3.1e-29 132.1 166 44.0
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 3.1e-29 132.1 167 43.7
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 3.1e-29 132.1 168 43.5
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 3.1e-29 132.1 164 45.7
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 5.3e-29 131.3 166 42.2
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 9.1e-29 130.6 166 44.6
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.5e-28 129.8 164 45.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 3.4e-28 128.6 167 43.7
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 5.9e-28 127.9 166 43.4
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 2.9e-27 125.6 166 46.4
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 8.5e-27 124.0 166 41.0
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 2.5e-26 122.5 165 43.6
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 3.2e-26 122.1 160 43.1
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 3.2e-26 122.1 167 41.3
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 4.2e-26 121.7 160 44.4
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 4.2e-26 121.7 151 47.0
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 9.4e-26 120.6 151 43.7
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 1.2e-25 120.2 159 44.0
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.6e-25 119.8 159 43.4
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 2.1e-25 119.4 160 43.8
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 3.6e-25 118.6 160 43.8
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 3.6e-25 118.6 163 41.1
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 6.1e-25 117.9 133 48.9
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 6.1e-25 117.9 167 40.7
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 7.9e-25 117.5 158 43.0
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.8e-24 116.3 132 47.0
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 1.8e-24 116.3 162 42.6
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.8e-24 116.3 163 40.5
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 3.0e-24 115.5 167 40.1
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 3.3e-23 112.1 160 38.8
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 1.4e-21 106.7 93 54.8
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.4e-21 106.7 145 40.0
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 9.1e-21 104.0 165 35.2
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 7.7e-20 100.9 73 61.6
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 1.3e-19 100.1 147 41.5
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 1.3e-19 100.1 148 40.5
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.9e-19 99.0 77 63.6
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 3.8e-19 98.6 90 51.1
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 6.5e-19 97.8 163 33.7
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 8.5e-19 97.4 167 37.7
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 5.5e-18 94.7 133 42.1
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 7.2e-18 94.4 91 48.4
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 1.2e-17 93.6 133 42.1
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 8.0e-17 90.9 164 32.3
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 1.0e-16 90.5 165 34.5
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 3.9e-16 88.6 145 37.2
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 1.7e-14 83.2 166 31.9
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.1e-13 80.5 143 37.8
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 5.3e-13 78.2 168 31.0
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 5.7e-07 58.2 43 58.1
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 2.2e-06 56.2 119 35.3


User provided reference genes

Program Settings