Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 2.3e-82 308.9 166 100.0
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 3.4e-57 225.3 192 69.3
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 4.9e-56 221.5 201 69.2
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 5.1e-53 211.5 194 66.5
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 3.0e-45 185.7 193 59.6
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 3.0e-45 185.7 189 63.5
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 7.3e-44 181.0 163 66.3
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 1.3e-43 180.3 168 66.1
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 2.1e-43 179.5 164 64.6
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 2.6e-41 172.6 193 59.1
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 4.9e-40 168.3 193 58.0
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 1.0e-32 144.1 153 56.9
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 1.3e-32 143.7 132 66.7
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 1.3e-32 143.7 147 59.2
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 1.7e-32 143.3 137 63.5
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 3.8e-32 142.1 136 65.4
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 3.8e-32 142.1 133 63.9
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 4.9e-32 141.7 115 72.2
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 4.9e-32 141.7 96 80.2
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 8.4e-32 141.0 138 61.6
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 8.4e-32 141.0 153 61.4
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 1.4e-31 140.2 96 79.2
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 2.5e-31 139.4 115 70.4
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 2.5e-31 139.4 107 73.8
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 3.2e-31 139.0 105 72.4
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.2e-30 137.1 141 59.6
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 1.6e-30 136.7 150 53.3
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 2.7e-30 136.0 143 59.4
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 4.6e-30 135.2 118 66.9
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.6e-30 135.2 118 66.9
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 6.0e-30 134.8 132 62.1
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 6.0e-30 134.8 121 68.6
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 7.9e-30 134.4 134 59.7
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 7.9e-30 134.4 140 64.3
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 7.9e-30 134.4 141 61.0
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 7.9e-30 134.4 115 67.8
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.0e-29 134.0 118 66.1
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 1.8e-29 133.3 137 56.9
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 2.3e-29 132.9 160 56.9
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 5.1e-29 131.7 126 63.5
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 6.7e-29 131.3 140 59.3
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 6.7e-29 131.3 146 56.8
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 8.7e-29 131.0 141 61.0
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 1.5e-28 130.2 120 65.8
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 1.5e-28 130.2 178 49.4
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 1.9e-28 129.8 131 61.1
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 1.9e-28 129.8 161 52.8
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 2.5e-28 129.4 136 61.0
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 3.3e-28 129.0 115 64.3
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 3.3e-28 129.0 123 61.8
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 3.3e-28 129.0 117 65.0
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 4.3e-28 128.6 122 65.6
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 5.7e-28 128.3 119 63.9
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 9.6e-28 127.5 118 66.1
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 9.6e-28 127.5 99 70.7
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 9.6e-28 127.5 99 70.7
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 9.6e-28 127.5 141 56.0
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 1.6e-27 126.7 142 57.0
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 2.8e-27 125.9 87 78.2
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.8e-27 125.9 118 62.7
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 3.7e-27 125.6 152 55.3
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.7e-27 125.6 98 71.4
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 6.2e-27 124.8 99 72.7
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 8.2e-27 124.4 117 65.0
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 1.1e-26 124.0 127 63.8
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 1.4e-26 123.6 86 75.6
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 2.4e-26 122.9 143 56.6
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 6.9e-26 121.3 131 58.0
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 9.0e-26 120.9 129 55.0
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 2.0e-25 119.8 143 55.9
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 2.6e-25 119.4 98 66.3
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 2.6e-25 119.4 77 83.1
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 1.0e-24 117.5 79 78.5
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 1.3e-24 117.1 107 65.4
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 1.7e-24 116.7 149 53.0
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 2.2e-24 116.3 143 52.4
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 2.9e-24 115.9 107 66.4
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 2.9e-24 115.9 107 66.4
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.8e-24 115.5 95 68.4
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 1.1e-23 114.0 128 52.3
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 1.4e-23 113.6 89 68.5
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 4.2e-23 112.1 133 57.9
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 5.5e-23 111.7 121 56.2
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 1.2e-22 110.5 114 53.5
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 4.6e-22 108.6 133 57.1
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 6.1e-22 108.2 98 62.2
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 6.1e-22 108.2 141 53.9
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 6.1e-22 108.2 102 61.8
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 1.3e-21 107.1 123 53.7
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 1.8e-21 106.7 102 60.8
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 2.3e-21 106.3 120 55.8
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 3.9e-21 105.5 102 60.8
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 3.9e-21 105.5 129 51.9
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 5.1e-21 105.1 83 73.5
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 6.7e-21 104.8 109 59.6
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 6.7e-21 104.8 156 46.2
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 6.7e-21 104.8 146 49.3
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 5.7e-20 101.7 151 47.0
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 7.4e-20 101.3 174 45.4
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 1.6e-19 100.1 108 57.4
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 2.8e-19 99.4 102 58.8
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 2.8e-19 99.4 135 47.4
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 2.8e-19 99.4 97 63.9
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 3.7e-19 99.0 130 49.2
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 1.4e-18 97.1 75 68.0
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 1.2e-17 94.0 114 50.9
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.5e-17 93.6 114 51.8
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 1.5e-17 93.6 142 45.8
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 2.6e-17 92.8 137 45.3
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 5.9e-17 91.7 109 53.2
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 1.1e-15 87.4 116 48.3
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 2.1e-14 83.2 76 59.2
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 4.6e-14 82.0 109 46.8
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 3.0e-13 79.3 93 52.7
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 3.0e-13 79.3 129 44.2
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 3.0e-13 79.3 117 46.2
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 5.1e-13 78.6 106 49.1
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 2.5e-12 76.3 141 38.3
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 4.3e-12 75.5 73 56.2
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 5.7e-12 75.1 56 66.1
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 7.4e-12 74.7 99 51.5
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 9.7e-12 74.3 89 49.4
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.4e-10 70.5 65 64.6
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.4e-10 70.5 65 64.6
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.8e-10 70.1 63 66.7
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.8e-10 70.1 63 66.7
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 3.1e-10 69.3 69 53.6
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 2.9e-08 62.8 108 38.9


User provided reference genes

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