Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20120_v3 Cicer arietinum L. HOM05D003422 ORTHO05D004263 1.1e-138 496.9 304 100.0
Psat7g167080 Pisum sativum HOM05D003422 ORTHO05D004263 1.4e-112 410.2 303 73.3
Medtr2g103560 Medicago truncatula HOM05D003422 ORTHO05D004263 3.1e-109 399.1 335 72.8
Phvul.011G000100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 4.1e-109 398.7 304 75.0
Phvul.010G035100 Phaseolus vulgaris HOM05D003422 ORTHO05D004263 1.2e-108 397.1 304 75.3
Glyma.12G119800 Glycine max HOM05D003422 ORTHO05D004263 7.7e-108 394.4 305 75.1
TPR.G28314 Trifolium pratense HOM05D003422 ORTHO05D004263 2.3e-107 392.9 302 68.5
TPR.G37166 Trifolium pratense HOM05D003422 ORTHO05D004263 2.3e-107 392.9 320 71.6
Glyma.06G286100 Glycine max HOM05D003422 ORTHO05D004263 1.9e-106 389.8 305 74.4
VMungo1127G0899 Vigna mungo HOM05D003422 ORTHO05D004263 9.8e-103 377.5 304 73.7
Lalb_Chr04g0254851 Lupinus albus HOM05D003422 ORTHO05D004263 1.7e-102 376.7 304 76.6
arahy.Tifrunner.gnm1.ann1.G4VR7T Arachis hypogaea HOM05D003422 ORTHO05D004263 2.0e-100 369.8 302 68.5
arahy.Tifrunner.gnm1.ann1.I3QT17 Arachis hypogaea HOM05D003422 ORTHO05D004263 2.1e-97 359.8 300 69.0
Lalb_Chr10g0099861 Lupinus albus HOM05D003422 ORTHO05D004263 6.1e-97 358.2 304 74.3
Dinv15231 Davidia involucrata HOM05D003422 ORTHO05D004263 1.8e-96 356.7 315 63.8
Medtr4g079190 Medicago truncatula HOM05D003422 ORTHO05D004263 7.5e-95 351.3 303 67.3
TAR622G0502 Trochodendron aralioides HOM05D003422 ORTHO05D004263 9.8e-95 350.9 306 62.7
Lj1g0018398 Lotus japonicus HOM05D003422 ORTHO05D004263 2.9e-94 349.4 307 70.7
QL03p061510 Quercus lobata HOM05D003422 ORTHO05D004263 2.9e-94 349.4 310 65.8
Hma1.2p1_3343F.1_g335440 Hydrangea macrophylla HOM05D003422 ORTHO05D004263 1.4e-93 347.1 307 62.9
GSVIVG01021879001 Vitis vinifera HOM05D003422 ORTHO05D004263 1.4e-93 347.1 307 64.5
GSVIVG01007655001 Vitis vinifera HOM05D003422 ORTHO05D004263 3.2e-93 345.9 307 63.8
QL03p058012 Quercus lobata HOM05D003422 ORTHO05D004263 1.2e-92 344.0 304 65.1
CSS0036067 Camellia sinensis var. sinensis HOM05D003422 ORTHO05D004263 2.0e-92 343.2 305 62.0
Cfa012129 Carpinus fangiana HOM05D003422 ORTHO05D004263 3.5e-92 342.4 306 68.3
Sed0026406 Sechium edule HOM05D003422 ORTHO05D004263 3.5e-92 342.4 305 62.6
Haze_08919 Corylus avellana HOM05D003422 ORTHO05D004263 1.3e-91 340.5 306 67.6
TWI39G0719 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 2.3e-91 339.7 304 63.8
Nn8g39875 Nelumbo nucifera HOM05D003422 ORTHO05D004263 3.0e-91 339.3 305 63.0
Haze_12250 Corylus avellana HOM05D003422 ORTHO05D004263 8.6e-91 337.8 312 66.7
Cfa009213 Carpinus fangiana HOM05D003422 ORTHO05D004263 5.6e-90 335.1 312 66.7
CiPaw.05G181800 Carya illinoinensis HOM05D003422 ORTHO05D004263 5.6e-90 335.1 306 64.1
CiPaw.05G159400 Carya illinoinensis HOM05D003422 ORTHO05D004263 2.1e-89 333.2 303 64.0
Nn8g40815 Nelumbo nucifera HOM05D003422 ORTHO05D004263 4.7e-89 332.0 299 65.9
TWI23G0208 Tripterygium wilfordii HOM05D003422 ORTHO05D004263 8.0e-89 331.3 303 64.0
Ciclev10032237m.g Citrus clementina HOM05D003422 ORTHO05D004263 1.8e-88 330.1 306 61.1
MELO3C017744.2 Cucumis melo HOM05D003422 ORTHO05D004263 1.8e-88 330.1 304 64.1
Cc11_g15770 Coffea canephora HOM05D003422 ORTHO05D004263 4.0e-88 328.9 308 61.4
Eucgr.B00992 Eucalyptus grandis HOM05D003422 ORTHO05D004263 8.9e-88 327.8 307 66.8
Prupe.1G244800 Prunus persica HOM05D003422 ORTHO05D004263 1.2e-87 327.4 308 61.4
arahy.Tifrunner.gnm1.ann1.FFB06F Arachis hypogaea HOM05D003422 ORTHO05D004263 1.5e-87 327.0 282 66.3
Atru.chr2.1587 Acer truncatum HOM05D003422 ORTHO05D004263 5.8e-87 325.1 303 58.7
Oeu041425.1 Olea europaea HOM05D003422 ORTHO05D004263 1.3e-86 323.9 307 61.2
Potri.012G085300 Populus trichocarpa HOM05D003422 ORTHO05D004263 1.7e-86 323.6 303 65.3
Sed0010066 Sechium edule HOM05D003422 ORTHO05D004263 1.7e-86 323.6 310 61.0
Sc14g0008740 Simmondsia chinensis HOM05D003422 ORTHO05D004263 3.7e-86 322.4 296 60.5
TAR374G1409 Trochodendron aralioides HOM05D003422 ORTHO05D004263 1.4e-85 320.5 311 59.5
CANSAT64G0467 Cannabis sativa HOM05D003422 ORTHO05D004263 3.2e-85 319.3 308 62.0
Nitab4.5_0001565g0060 Nicotiana tabacum HOM05D003422 ORTHO05D004263 3.2e-85 319.3 310 61.0
Nitab4.5_0009109g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 4.1e-85 318.9 310 60.6
Eucgr.K01009 Eucalyptus grandis HOM05D003422 ORTHO05D004263 1.6e-84 317.0 308 64.9
Atru.chr3.1581 Acer truncatum HOM05D003422 ORTHO05D004263 3.5e-84 315.8 297 60.6
ClCG07G015410 Citrullus lanatus HOM05D003422 ORTHO05D004263 4.6e-84 315.5 296 64.2
Dinv38208 Davidia involucrata HOM05D003422 ORTHO05D004263 4.6e-84 315.5 204 77.9
Manes.13G024200 Manihot esculenta HOM05D003422 ORTHO05D004263 4.6e-84 315.5 311 58.2
Hund06028 Selenicereus undatus HOM05D003422 ORTHO05D004263 6.0e-84 315.1 306 61.4
Actinidia15098 Actinidia chinensis HOM05D003422 ORTHO05D004263 1.0e-83 314.3 306 63.7
Nitab4.5_0016963g0010 Nicotiana tabacum HOM05D003422 ORTHO05D004263 1.0e-83 314.3 312 59.3
RcHm_v2.0_Chr4g0433011 Rosa chinensis HOM05D003422 ORTHO05D004263 1.0e-83 314.3 308 58.1
Aqoxy5G03760 Aquilegia oxysepala HOM05D003422 ORTHO05D004263 3.0e-83 312.8 306 63.7
CsaV3_4G003000 Cucumis sativus L. HOM05D003422 ORTHO05D004263 3.9e-83 312.4 305 64.9
FAN07G0682 Fragaria x ananassa HOM05D003422 ORTHO05D004263 3.9e-83 312.4 304 60.2
MD03G1198200 Malus domestica HOM05D003422 ORTHO05D004263 3.9e-83 312.4 307 58.0
Sopen01g001810 Solanum pennellii HOM05D003422 ORTHO05D004263 5.1e-83 312.0 310 61.6
Sabra15G0107000 Salix brachista HOM05D003422 ORTHO05D004263 6.6e-83 311.6 306 62.7
Cpa.g.sc33.23 Carica papaya HOM05D003422 ORTHO05D004263 1.9e-82 310.1 310 64.5
Potri.015G083700 Populus trichocarpa HOM05D003422 ORTHO05D004263 2.5e-82 309.7 301 63.1
Prupe.8G016700 Prunus persica HOM05D003422 ORTHO05D004263 2.5e-82 309.7 296 61.1
Nn2g13933 Nelumbo nucifera HOM05D003422 ORTHO05D004263 1.6e-81 307.0 206 79.1
FAN22G1899 Fragaria x ananassa HOM05D003422 ORTHO05D004263 3.6e-81 305.8 309 60.5
MD11G1214400 Malus domestica HOM05D003422 ORTHO05D004263 1.8e-80 303.5 309 56.0
RcHm_v2.0_Chr7g0190541 Rosa chinensis HOM05D003422 ORTHO05D004263 4.0e-80 302.4 305 56.7
FvH4_4g25580 Fragaria vesca HOM05D003422 ORTHO05D004263 5.2e-80 302.0 311 63.0
Solyc01g005810.3 Solanum lycopersicum HOM05D003422 ORTHO05D004263 5.2e-80 302.0 306 59.8
PGSC0003DMG400032131 Solanum tuberosum HOM05D003422 ORTHO05D004263 3.4e-79 299.3 309 59.5
FAN17G2514 Fragaria x ananassa HOM05D003422 ORTHO05D004263 4.4e-79 298.9 313 59.7
CAN.G158.25 Capsicum annuum HOM05D003422 ORTHO05D004263 8.3e-78 294.7 294 61.6
PGR102G0689 Punica granatum HOM05D003422 ORTHO05D004263 1.1e-77 294.3 312 61.5
HPP92_014432 Vanilla planifolia HOM05D003422 ORTHO05D004263 9.2e-77 291.2 305 58.7
unitig_21.g20608 Utricularia gibba HOM05D003422 ORTHO05D004263 1.2e-76 290.8 204 79.9
Peaxi162Scf00128g00219 Petunia axillaris HOM05D003422 ORTHO05D004263 2.1e-76 290.0 311 57.2
THA.LOC104822989 Tarenaya hassleriana HOM05D003422 ORTHO05D004263 2.1e-76 290.0 295 66.8
Duzib068G0444 Durio zibethinus HOM05D003422 ORTHO05D004263 3.5e-76 289.3 302 60.3
HanXRQChr06g0172831 Helianthus annuus HOM05D003422 ORTHO05D004263 3.5e-76 289.3 305 56.1
Rhsim06G0078600 Rhododendron simsii HOM05D003422 ORTHO05D004263 6.0e-76 288.5 402 48.0
BcaC08g45809 Brassica carinata HOM05D003422 ORTHO05D004263 1.0e-75 287.7 204 71.6
A07p31020 Brassica napus HOM05D003422 ORTHO05D004263 1.0e-75 287.7 204 71.6
C06p36020 Brassica napus HOM05D003422 ORTHO05D004263 1.0e-75 287.7 204 71.6
BolC6t38723H Brassica oleracea HOM05D003422 ORTHO05D004263 1.0e-75 287.7 204 71.6
BcaB05g24600 Brassica carinata HOM05D003422 ORTHO05D004263 1.3e-75 287.3 204 71.6
BcaB03g15550 Brassica carinata HOM05D003422 ORTHO05D004263 3.0e-75 286.2 204 71.1
A02p16750 Brassica napus HOM05D003422 ORTHO05D004263 3.0e-75 286.2 204 71.6
SEGI_07600 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 3.0e-75 286.2 307 51.1
Sabra12G0061400 Salix brachista HOM05D003422 ORTHO05D004263 6.6e-75 285.0 336 57.7
Atru.chr3.1559 Acer truncatum HOM05D003422 ORTHO05D004263 1.5e-74 283.9 298 59.1
Sp5g25830 Schrenkiella parvula HOM05D003422 ORTHO05D004263 1.9e-74 283.5 299 61.9
BcaC03g15214 Brassica carinata HOM05D003422 ORTHO05D004263 2.5e-74 283.1 203 70.4
C02p28010 Brassica napus HOM05D003422 ORTHO05D004263 2.5e-74 283.1 203 70.4
BolC2t08844H Brassica oleracea HOM05D003422 ORTHO05D004263 2.5e-74 283.1 203 70.4
COL.COLO4_05559 Corchorus olitorius HOM05D003422 ORTHO05D004263 5.6e-74 282.0 303 61.4
Rhsim12G0110100 Rhododendron simsii HOM05D003422 ORTHO05D004263 5.6e-74 282.0 346 50.9
Eucgr.K00985 Eucalyptus grandis HOM05D003422 ORTHO05D004263 7.3e-74 281.6 193 77.7
DCAR_026512 Daucus carota HOM05D003422 ORTHO05D004263 2.1e-73 280.0 302 53.3
Aa31LG7G7310 Aethionema arabicum HOM05D003422 ORTHO05D004263 4.7e-73 278.9 304 60.5
Gohir.A12G199400 Gossypium hirsutum HOM05D003422 ORTHO05D004263 4.7e-73 278.9 302 60.9
Rhsim02G0001300 Rhododendron simsii HOM05D003422 ORTHO05D004263 4.7e-73 278.9 240 62.5
Migut.E00204 Erythranthe guttata HOM05D003422 ORTHO05D004263 1.4e-72 277.3 194 71.6
Gohir.D12G202200 Gossypium hirsutum HOM05D003422 ORTHO05D004263 3.1e-72 276.2 301 62.1
Gorai.008G217200 Gossypium raimondii HOM05D003422 ORTHO05D004263 3.1e-72 276.2 301 62.5
PSO017G5618 Papaver somniferum HOM05D003422 ORTHO05D004263 3.1e-72 276.2 302 55.6
Carub.0001s2287 Capsella rubella HOM05D003422 ORTHO05D004263 5.2e-72 275.4 298 55.7
FAN06G1621 Fragaria x ananassa HOM05D003422 ORTHO05D004263 6.8e-72 275.0 290 54.1
PSO017G4826 Papaver somniferum HOM05D003422 ORTHO05D004263 1.3e-70 270.8 314 52.2
ATR0824G091 Amborella trichopoda HOM05D003422 ORTHO05D004263 2.2e-70 270.0 305 55.4
BraA02t06729Z Brassica rapa HOM05D003422 ORTHO05D004263 4.9e-70 268.9 299 59.5
Thhalv10008312m.g Eutrema salsugineum HOM05D003422 ORTHO05D004263 4.9e-70 268.9 315 53.7
Os07g0270900 Oryza sativa ssp. japonica HOM05D003422 ORTHO05D004263 8.4e-70 268.1 201 65.7
Lsat_1_v5_gn_8_152261 Lactuca sativa HOM05D003422 ORTHO05D004263 1.9e-69 266.9 290 55.5
Thecc.03G025100 Theobroma cacao HOM05D003422 ORTHO05D004263 1.9e-69 266.9 301 58.8
AT1G23280 Arabidopsis thaliana HOM05D003422 ORTHO05D004263 3.2e-69 266.2 306 55.6
ECA233G3049 Erigeron canadensis HOM05D003422 ORTHO05D004263 4.2e-69 265.8 303 59.1
vmacro17129 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 4.2e-69 265.8 317 51.7
CARHR023720 Cardamine hirsuta HOM05D003422 ORTHO05D004263 1.6e-68 263.8 302 57.9
AL1G31870 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 2.1e-68 263.5 249 57.4
PSO478G1628 Papaver somniferum HOM05D003422 ORTHO05D004263 2.1e-68 263.5 315 52.7
BraA03t13450Z Brassica rapa HOM05D003422 ORTHO05D004263 4.6e-68 262.3 303 55.1
Mapoly0061s0104 Marchantia polymorpha HOM05D003422 ORTHO05D004263 7.8e-68 261.5 202 62.9
EL10Ac6g13812 Beta vulgaris HOM05D003422 ORTHO05D004263 1.0e-67 261.2 310 51.0
Zm00001eb364260 Zea mays HOM05D003422 ORTHO05D004263 4.3e-66 255.8 301 49.8
BcaC01g03409 Brassica carinata HOM05D003422 ORTHO05D004263 1.3e-65 254.2 317 50.8
C03p52870 Brassica napus HOM05D003422 ORTHO05D004263 1.3e-65 254.2 317 50.8
Lsat_1_v5_gn_5_166341 Lactuca sativa HOM05D003422 ORTHO05D004263 1.3e-65 254.2 288 53.1
A03p43080 Brassica napus HOM05D003422 ORTHO05D004263 6.2e-65 251.9 344 47.1
BolC3t17554H Brassica oleracea HOM05D003422 ORTHO05D004263 6.2e-65 251.9 316 50.6
CBR_g32274 Chara braunii HOM05D003422 ORTHO05D004263 6.2e-65 251.9 201 67.7
AL1G37060 Arabidopsis lyrata HOM05D003422 ORTHO05D004263 1.8e-64 250.4 250 58.4
CDE02G2608 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 3.1e-64 249.6 232 61.2
Pp3c2_4220 Physcomitrium patens HOM05D003422 ORTHO05D004263 3.4e-63 246.1 311 50.8
SMO331G0073 Selaginella moellendorffii HOM05D003422 ORTHO05D004263 3.8e-62 242.7 264 53.4
AUR62003555 Chenopodium quinoa HOM05D003422 ORTHO05D004263 7.1e-61 238.4 312 45.8
SGA_v2.0_scaffold63G21735 Striga asiatica HOM05D003637 ORTHO05D004175 1.6e-60 237.3 224 67.0
AUR62017869 Chenopodium quinoa HOM05D003422 ORTHO05D004263 3.5e-60 236.1 312 45.8
SpUn0343_0020 Schrenkiella parvula HOM05D003422 ORTHO05D004263 3.5e-60 236.1 280 54.3
BcaC09g49229 Brassica carinata HOM05D003422 ORTHO05D004263 1.7e-59 233.8 182 64.8
vmacro16194 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 5.1e-59 232.3 206 60.7
Actinidia27808 Actinidia chinensis HOM05D003422 ORTHO05D004263 1.6e-57 227.3 207 58.5
Cre02.g145231 Chlamydomonas reinhardtii HOM05D003422 ORTHO05D004263 1.4e-56 224.2 204 54.4
A01p32170 Brassica napus HOM05D003422 ORTHO05D004263 3.4e-55 219.5 246 52.8
Nitab4.5_0000979g0040 Nicotiana tabacum HOM05D003422 ORTHO05D004263 9.9e-55 218.0 154 72.1
CDE05G1364 Ceratophyllum demersum HOM05D003422 ORTHO05D004263 3.8e-54 216.1 128 75.8
SEGI_01875 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 1.1e-53 214.5 128 78.9
BraA01t03342Z Brassica rapa HOM05D003422 ORTHO05D004263 2.1e-52 210.3 287 47.4
PRCOL_00004566 Prasinoderma coloniale HOM05D003422 ORTHO05D004263 2.7e-52 209.9 203 51.2
ATR0996G003 Amborella trichopoda HOM05D003422 ORTHO05D004263 4.6e-52 209.1 272 48.9
Prupe.8G011700 Prunus persica HOM05D003422 ORTHO05D004263 2.3e-51 206.8 246 54.9
FvH4_7g31100 Fragaria vesca HOM05D003422 ORTHO05D004263 1.5e-47 194.1 194 54.6
Pp3c1_36430 Physcomitrium patens HOM05D003422 ORTHO05D004263 3.4e-47 193.0 307 43.0
MCO01G280 Micromonas commoda HOM05D003422 ORTHO05D004263 1.0e-43 181.4 207 53.6
Actinidia01349 Actinidia chinensis HOM05D003422 ORTHO05D004263 1.9e-42 177.2 282 48.9
SGA_v2.0_scaffold87G27078 Striga asiatica HOM05D003637 ORTHO05D004175 3.7e-41 172.9 223 59.2
Cfa026988 Carpinus fangiana HOM05D003422 ORTHO05D004263 6.9e-40 168.7 214 43.5
Haze_26253 Corylus avellana HOM05D003422 ORTHO05D004263 4.5e-39 166.0 247 45.7
Eucgr.K00976 Eucalyptus grandis HOM05D003422 ORTHO05D004263 5.8e-39 165.6 293 45.4
Lj1A759T42 Lonicera japonica HOM05D003422 ORTHO05D004263 1.7e-30 137.5 148 61.5
BolC1t04073H Brassica oleracea HOM05D003422 ORTHO05D004263 5.7e-26 122.5 71 78.9
C01p41190 Brassica napus HOM05D003422 ORTHO05D004263 9.7e-26 121.7 71 77.5
Eucgr.B00881 Eucalyptus grandis HOM05D003422 ORTHO05D004263 2.8e-25 120.2 70 81.4
Ah.04g165080 Amaranthus hybridus HOM05D002611 ORTHO05D002822 8.2e-25 118.6 193 44.6
AagrBONN_evm.TU.Sc2ySwM_344.1527 Anthoceros agrestis HOM05D003422 ORTHO05D004263 2.0e-23 114.0 145 51.0
BcaB04g17046 Brassica carinata HOM05D003422 ORTHO05D004263 1.3e-22 111.3 72 76.4
Os07g0271600 Oryza sativa ssp. japonica HOM05D003422 ORTHO05D004263 2.2e-22 110.5 77 68.8
BcaB01g03637 Brassica carinata HOM05D003422 ORTHO05D004263 2.5e-21 107.1 77 74.0
BolC4t24676H Brassica oleracea HOM05D003422 ORTHO05D004263 1.2e-20 104.8 114 56.1
BcaB07g33435 Brassica carinata HOM05D003422 ORTHO05D004263 1.8e-19 100.9 77 70.1
FAN06G3710 Fragaria x ananassa HOM05D003422 ORTHO05D004263 9.7e-18 95.1 46 89.1
Medtr1g048860 Medicago truncatula HOM05D003422 ORTHO05D004263 9.4e-13 78.6 146 56.2
BcaB01g02833 Brassica carinata HOM05D003422 ORTHO05D004263 1.2e-12 78.2 76 59.2
BcaC02g10230 Brassica carinata HOM05D003422 ORTHO05D004263 4.7e-12 76.3 73 58.9
Oeu036040.1 Olea europaea HOM05D003422 ORTHO05D004263 8.0e-12 75.5 130 38.5
SEGI_38458 Sequoiadendron giganteum HOM05D003422 ORTHO05D004263 2.6e-10 70.5 171 31.6
FAN10G4221 Fragaria x ananassa HOM05D003422 ORTHO05D004263 1.7e-09 67.8 79 50.6
vmacro17128 Vaccinium macrocarpon HOM05D003422 ORTHO05D004263 1.7e-09 67.8 147 39.5
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 8.5e-06 55.5 46 67.4


User provided reference genes

Program Settings