Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_20006_v3 Cicer arietinum L. HOM05D032112 ORTHO05D000670 5.1e-37 157.1 75 100.0
Ca_19572_v3 Cicer arietinum L. HOM05D032112 ORTHO05D000670 5.7e-36 153.7 75 98.7
Ca_22819_v3 Cicer arietinum L. HOM05D032112 ORTHO05D000670 9.7e-36 152.9 74 98.6
Ca_01039_v3 Cicer arietinum L. HOM05D000840 ORTHO05D000670 6.5e-08 60.5 37 83.8
Ca_01040_v3 Cicer arietinum L. HOM05D000840 ORTHO05D000670 1.1e-07 59.7 37 83.8
Glyma.15G005500 Glycine max HOM05D000840 ORTHO05D000670 1.5e-07 59.3 37 83.8
Phvul.005G180200 Phaseolus vulgaris HOM05D000840 ORTHO05D000670 2.5e-07 58.5 37 83.8
VMungo1080G0802 Vigna mungo HOM05D000840 ORTHO05D000670 2.5e-07 58.5 37 83.8
Ca_02393_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.2e-07 58.2 28 89.3
Ca_20456_v3 Cicer arietinum L. HOM05D000840 ORTHO05D000670 4.2e-07 57.8 37 81.1
Lalb_Chr25g0279141 Lupinus albus HOM05D000840 ORTHO05D000670 4.2e-07 57.8 38 78.9
Glyma.13G367700 Glycine max HOM05D000840 ORTHO05D000670 5.5e-07 57.4 37 81.1
Lj3g0027916 Lotus japonicus HOM05D000840 ORTHO05D000670 5.5e-07 57.4 37 81.1
Lalb_Chr01g0012231 Lupinus albus HOM05D000840 ORTHO05D000670 5.5e-07 57.4 38 78.9
arahy.Tifrunner.gnm1.ann1.8F3D8E Arachis hypogaea HOM05D000840 ORTHO05D000670 7.2e-07 57.0 37 81.1
arahy.Tifrunner.gnm1.ann1.E5CV98 Arachis hypogaea HOM05D000840 ORTHO05D000670 7.2e-07 57.0 37 81.1
Lalb_Chr24g0395381 Lupinus albus HOM05D000840 ORTHO05D000670 7.2e-07 57.0 37 81.1
Psat5g304200 Pisum sativum HOM05D000840 ORTHO05D000670 7.2e-07 57.0 37 81.1
TPR.G37212 Trifolium pratense HOM05D000840 ORTHO05D000670 7.2e-07 57.0 37 81.1
VMungo1080G1304 Vigna mungo HOM05D000840 ORTHO05D000670 7.2e-07 57.0 37 81.1
Lalb_Chr04g0262271 Lupinus albus HOM05D000840 ORTHO05D000670 9.4e-07 56.6 38 76.3
CANSAT56G1456 Cannabis sativa HOM05D000840 ORTHO05D000670 1.6e-06 55.8 37 75.7
FAN16G1995 Fragaria x ananassa HOM05D000840 ORTHO05D000670 1.6e-06 55.8 37 78.4
MD11G1036600 Malus domestica HOM05D000840 ORTHO05D000670 1.6e-06 55.8 37 78.4
Medtr2g104400 Medicago truncatula HOM05D000840 ORTHO05D000670 1.6e-06 55.8 37 78.4
TPR.G19143 Trifolium pratense HOM05D000840 ORTHO05D000670 2.1e-06 55.5 37 78.4
CANSAT56G3623 Cannabis sativa HOM05D000840 ORTHO05D000670 3.6e-06 54.7 37 73.0
CiPaw.02G159300 Carya illinoinensis HOM05D000840 ORTHO05D000670 3.6e-06 54.7 43 72.1
Medtr2g104430 Medicago truncatula HOM05D000840 ORTHO05D000670 3.6e-06 54.7 37 78.4
RcHm_v2.0_Chr5g0075801 Rosa chinensis HOM05D000840 ORTHO05D000670 3.6e-06 54.7 37 75.7
CANSAT56G1601 Cannabis sativa HOM05D000840 ORTHO05D000670 4.7e-06 54.3 37 73.0
Gohir.A10G072300 Gossypium hirsutum HOM05D000840 ORTHO05D000670 4.7e-06 54.3 37 78.4
Gohir.A10G072400 Gossypium hirsutum HOM05D000840 ORTHO05D000670 4.7e-06 54.3 37 78.4
Gohir.D10G078700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 4.7e-06 54.3 37 75.7
Medtr4g009740 Medicago truncatula HOM05D000840 ORTHO05D000670 4.7e-06 54.3 37 73.0
DCAR_003830 Daucus carota HOM05D000840 ORTHO05D000670 6.1e-06 53.9 37 75.7
Phvul.005G180300 Phaseolus vulgaris HOM05D000840 ORTHO05D000670 6.1e-06 53.9 37 73.0
Aqoxy1G00094 Aquilegia oxysepala HOM05D000840 ORTHO05D000670 8.0e-06 53.5 37 75.7
CSS0002332 Camellia sinensis var. sinensis HOM05D000840 ORTHO05D000670 8.0e-06 53.5 37 73.0
CSS0022831 Camellia sinensis var. sinensis HOM05D000840 ORTHO05D000670 8.0e-06 53.5 37 75.7
Medtr2g095920 Medicago truncatula HOM05D000134 ORTHO05D000168 8.0e-06 53.5 37 73.0
Psat7g257960 Pisum sativum HOM05D000840 ORTHO05D000670 8.0e-06 53.5 37 73.0
GSVIVG01012467001 Vitis vinifera HOM05D000840 ORTHO05D000670 8.0e-06 53.5 37 75.7


User provided reference genes

Program Settings