Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19985_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 8.6e-82 307.0 160 100.0
Ca_00014_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 1.2e-46 190.3 163 67.5
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 1.7e-29 133.3 136 58.8
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 2.9e-29 132.5 136 59.6
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 1.5e-25 120.2 135 54.1
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 2.5e-25 119.4 132 52.3
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 1.5e-22 110.2 182 42.3
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 7.6e-22 107.8 136 50.7
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 2.9e-21 105.9 136 49.3
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 8.4e-21 104.4 136 49.3
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 1.4e-20 103.6 136 48.5
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 5.5e-20 101.7 137 48.2
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 2.0e-14 83.2 126 42.9
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 2.0e-14 83.2 132 40.2
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 3.8e-13 79.0 132 37.9
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 4.9e-13 78.6 131 37.4
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 2.5e-12 76.3 132 36.4
COL.COLO4_07790 Corchorus olitorius HOM05D003079 ORTHO05D003461 5.5e-12 75.1 132 36.4
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 5.5e-12 75.1 132 36.4
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 5.5e-12 75.1 129 38.0
CiPaw.12G142900 Carya illinoinensis HOM05D003079 ORTHO05D003461 7.1e-12 74.7 130 36.9
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 1.6e-11 73.6 130 35.4
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 1.6e-11 73.6 130 35.4
Ca_22847_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 2.1e-11 73.2 57 66.7
Actinidia30351 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.7e-11 72.8 132 34.8
Ca_13861_v3 Cicer arietinum L. HOM05D002031 ORTHO05D003557 6.1e-11 71.6 140 38.6
Psat4g111200 Pisum sativum HOM05D003079 ORTHO05D003461 6.1e-11 71.6 76 50.0
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 6.1e-11 71.6 128 35.9
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 7.9e-11 71.2 132 34.1
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 1.3e-10 70.5 132 37.1
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 6.7e-10 68.2 159 32.7
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.1e-09 67.4 127 34.6
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.1e-09 67.4 127 34.6
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.1e-09 67.4 127 34.6
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.1e-09 67.4 189 27.5
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.5e-09 67.0 189 27.0
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.9e-09 66.6 189 27.5
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 2.5e-09 66.2 131 35.1
Lalb_Chr18g0048661 Lupinus albus HOM05D003079 ORTHO05D003461 2.5e-09 66.2 133 38.3
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 3.3e-09 65.9 189 27.5
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 3.3e-09 65.9 189 27.5
Ca_27381_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 7.4e-09 64.7 65 56.9
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 7.4e-09 64.7 146 30.1
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 7.4e-09 64.7 132 34.1
TPR.G28965 Trifolium pratense HOM05D003079 ORTHO05D003461 9.7e-09 64.3 89 41.6
Ca_17168_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 1.3e-08 63.9 58 60.3
Ca_26778_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 1.3e-08 63.9 54 63.0
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 1.6e-08 63.5 127 33.1
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.6e-08 63.5 132 31.8
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 2.2e-08 63.2 95 40.0
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 4.8e-08 62.0 117 35.0
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.8e-08 62.0 75 42.7
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 6.3e-08 61.6 149 28.2
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 6.3e-08 61.6 75 41.3
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 8.2e-08 61.2 136 35.3
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 8.2e-08 61.2 135 31.1
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 8.2e-08 61.2 132 34.8
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.1e-07 60.8 75 41.3
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.1e-07 60.8 132 31.8
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 1.1e-07 60.8 133 31.6
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.4e-07 60.5 114 36.0
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 1.4e-07 60.5 82 46.3
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.4e-07 60.5 132 31.8
Ca_19739_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 1.8e-07 60.1 86 43.0
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 1.8e-07 60.1 127 33.1
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.8e-07 60.1 132 32.6
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 3.1e-07 59.3 92 40.2
Ca_26148_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 4.1e-07 58.9 37 73.0
Ca_27198_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 4.1e-07 58.9 84 42.9
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 4.1e-07 58.9 146 28.1
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 4.1e-07 58.9 100 36.0
TAR626G1036 Trochodendron aralioides HOM05D003079 ORTHO05D003461 4.1e-07 58.9 92 44.6
Ca_12965_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 5.3e-07 58.5 51 62.7
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 5.3e-07 58.5 76 38.2
Ca_14167_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 9.0e-07 57.8 39 71.8
Ca_25736_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 1.5e-06 57.0 55 58.2
Ca_23029_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 2.0e-06 56.6 86 41.9
Ca_23031_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 2.0e-06 56.6 86 41.9
Ca_14361_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 3.4e-06 55.8 39 69.2
Ca_17040_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 3.4e-06 55.8 40 65.0
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 4.5e-06 55.5 131 29.0
Ca_03002_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 5.9e-06 55.1 56 55.4
Ca_21034_v3 Cicer arietinum L. HOM05D002031 ORTHO05D003557 5.9e-06 55.1 86 44.2
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 7.7e-06 54.7 99 36.4
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 1.0e-05 54.3 76 40.8
Medtr8g070940 Medicago truncatula HOM05D003079 ORTHO05D003461 1.0e-05 54.3 152 28.9


User provided reference genes

Program Settings