Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 0.0e+00 1289.2 643 100.0
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 0.0e+00 1125.5 646 88.7
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 0.0e+00 1110.5 651 86.2
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 0.0e+00 1105.9 652 86.0
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 1.3e-298 1029.2 639 80.0
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.5e-294 1015.8 582 82.3
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 3.3e-294 1014.6 582 82.3
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 6.3e-293 1010.4 646 78.6
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 1.4e-292 1009.2 657 78.4
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.8e-292 1008.8 646 78.8
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 3.1e-276 954.9 605 79.5
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 3.4e-270 934.9 587 74.8
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 2.2e-269 932.2 590 74.6
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 6.3e-269 930.6 582 74.7
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 8.3e-269 930.2 581 75.2
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 5.4e-268 927.5 584 74.7
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 5.4e-268 927.5 591 75.5
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 9.2e-268 926.8 601 74.5
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 2.0e-267 925.6 590 75.1
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 1.3e-266 922.9 637 69.7
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 2.3e-266 922.2 588 75.0
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 3.9e-266 921.4 585 73.7
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 8.6e-266 920.2 585 74.5
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 1.1e-265 919.8 583 74.8
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.5e-265 919.5 585 74.4
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 1.5e-265 919.5 584 73.3
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 3.3e-265 918.3 583 74.1
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 5.6e-265 917.5 591 73.9
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 5.6e-265 917.5 596 72.7
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 2.1e-264 915.6 580 74.3
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 2.1e-264 915.6 590 73.1
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 1.0e-263 913.3 598 71.7
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.4e-263 912.9 585 73.7
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 3.1e-263 911.8 591 73.3
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.2e-262 909.8 580 74.0
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 1.2e-262 909.8 585 74.0
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 1.2e-262 909.8 591 71.7
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 3.4e-262 908.3 588 73.1
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.1e-260 903.3 580 73.4
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 7.0e-260 900.6 582 72.9
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 9.2e-260 900.2 586 72.5
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 1.6e-259 899.4 584 72.9
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.6e-259 899.4 581 73.3
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 2.0e-259 899.0 594 72.2
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 1.0e-258 896.7 598 70.7
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 1.7e-258 896.0 583 72.0
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 3.0e-258 895.2 580 72.8
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 6.6e-258 894.0 580 72.2
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.9e-257 892.5 580 72.9
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 5.6e-257 891.0 582 72.5
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 7.3e-257 890.6 606 70.1
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 3.1e-255 885.2 576 72.6
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 5.2e-255 884.4 667 64.9
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 8.9e-255 883.6 617 68.7
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 3.4e-254 881.7 584 71.4
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 6.4e-253 877.5 578 71.3
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.2e-252 875.2 586 70.8
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 5.4e-252 874.4 586 70.8
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 1.2e-251 873.2 584 70.9
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.5e-251 871.7 586 70.6
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.7e-250 869.4 586 70.5
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.0e-250 868.6 586 70.3
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 7.3e-249 864.0 581 69.2
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 1.6e-248 862.8 583 70.5
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 8.1e-248 860.5 581 70.6
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 3.4e-246 855.1 581 68.8
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 3.2e-244 848.6 547 72.8
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.6e-243 846.3 589 67.1
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 7.8e-243 844.0 584 70.0
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 2.3e-242 842.4 580 67.8
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 6.6e-242 840.9 582 69.8
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 3.4e-238 828.6 580 69.3
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 3.4e-238 828.6 597 67.8
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 6.4e-237 824.3 577 69.3
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 3.6e-232 808.5 587 67.5
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 4.8e-232 808.1 580 67.8
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 8.1e-232 807.4 580 67.1
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 6.9e-231 804.3 577 66.6
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 2.6e-230 802.4 578 66.8
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 4.4e-230 801.6 559 68.2
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 3.2e-228 795.4 590 66.9
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.9e-225 786.2 591 66.3
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.9e-225 786.2 591 66.3
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 3.3e-225 785.4 589 66.2
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 2.1e-224 782.7 584 65.4
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 2.8e-224 782.3 587 65.9
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 4.9e-221 771.5 539 66.6
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 2.4e-220 769.2 587 65.6
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 2.1e-219 766.1 585 63.8
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.9e-209 733.0 576 62.8
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 2.8e-208 729.2 618 59.5
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.7e-205 719.9 581 61.6
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 8.5e-189 664.5 582 58.9
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 5.1e-186 655.2 584 56.0
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.1e-185 654.1 550 58.5
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 5.7e-185 651.7 578 56.9
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 1.3e-176 624.0 592 53.5
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 2.8e-176 622.9 475 63.2
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 6.5e-173 611.7 576 52.8
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 4.7e-171 605.5 605 51.9
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 1.3e-160 570.9 379 69.4
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 7.3e-132 475.3 535 49.7
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 6.4e-120 435.6 262 77.5
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.6e-94 351.3 210 78.1
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 5.5e-79 299.7 191 74.3
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 3.7e-59 233.8 200 54.5
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 3.1e-58 230.7 182 62.6
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.5e-47 195.3 107 81.3
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 4.1e-42 177.2 133 60.2
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 3.1e-29 134.4 75 82.7
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 6.4e-27 126.7 65 87.7
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 2.7e-25 121.3 80 72.5
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 4.6e-25 120.6 101 53.5
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 4.3e-23 114.0 73 75.3
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.4e-13 82.4 37 97.3
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 4.4e-12 77.4 135 41.5
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 7.6e-12 76.6 43 79.1
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 8.4e-11 73.2 39 82.1


User provided reference genes

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