Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_19908_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 1.1e-101 373.2 179 100.0
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 1.3e-99 366.3 175 100.0
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 3.8e-86 321.6 175 85.1
TPR.G28617 Trifolium pratense HOM05D004072 ORTHO05D005933 1.9e-85 319.3 175 84.6
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 5.4e-85 317.8 175 82.3
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 9.6e-82 307.0 175 78.9
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 6.2e-81 304.3 175 78.9
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 1.1e-80 303.5 175 79.4
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 5.3e-80 301.2 175 77.7
Glyma.15G192700 Glycine max HOM05D004072 ORTHO05D005933 1.5e-79 299.7 175 77.7
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 5.8e-79 297.7 175 75.4
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 1.3e-78 296.6 175 74.9
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 1.3e-78 296.6 175 75.4
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 3.9e-75 285.0 176 73.3
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 3.9e-75 285.0 176 73.3
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 5.1e-75 284.6 175 72.6
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 6.6e-75 284.3 176 73.3
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 6.6e-75 284.3 176 73.3
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 8.7e-75 283.9 176 72.7
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 8.7e-75 283.9 176 73.9
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 1.1e-74 283.5 176 73.9
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.6e-73 279.6 176 72.7
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 6.2e-73 277.7 176 72.2
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 3.1e-72 275.4 176 72.2
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 5.3e-72 274.6 175 71.4
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 1.5e-71 273.1 176 71.0
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 1.5e-71 273.1 176 70.5
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 2.0e-71 272.7 176 71.0
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 5.8e-71 271.2 176 69.9
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 2.2e-70 269.2 176 71.0
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 2.2e-70 269.2 176 67.6
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 1.1e-69 266.9 176 69.3
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 3.2e-69 265.4 176 69.3
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 4.2e-69 265.0 176 68.2
Hma1.2p1_1600F.1_g293150 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 9.3e-69 263.8 176 70.5
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 1.6e-68 263.1 175 65.7
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 4.6e-68 261.5 176 68.2
Lj1C1164T5 Lonicera japonica HOM05D004072 ORTHO05D005933 1.3e-67 260.0 175 68.0
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 3.0e-67 258.8 176 68.8
Potri.011G090150 Populus trichocarpa HOM05D004072 ORTHO05D005933 3.0e-67 258.8 176 67.0
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 5.1e-67 258.1 176 68.2
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 1.1e-66 256.9 176 65.9
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.1e-66 256.9 186 63.4
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 1.5e-66 256.5 176 67.0
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.9e-66 256.1 176 65.3
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 1.9e-66 256.1 176 66.5
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 3.3e-66 255.4 174 65.5
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 7.4e-66 254.2 176 67.0
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 7.4e-66 254.2 176 66.5
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 7.4e-66 254.2 195 61.0
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 1.6e-65 253.1 175 65.1
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 1.6e-65 253.1 175 65.1
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 2.1e-65 252.7 176 65.3
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 3.7e-65 251.9 176 67.6
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 3.7e-65 251.9 176 67.0
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 3.7e-65 251.9 176 65.3
TAR626G0996 Trochodendron aralioides HOM05D004072 ORTHO05D005933 1.1e-64 250.4 176 67.6
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 1.4e-64 250.0 176 65.9
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 1.8e-64 249.6 175 64.6
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 6.9e-64 247.7 176 63.1
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 6.9e-64 247.7 175 65.1
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 1.5e-63 246.5 176 64.2
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 1.5e-63 246.5 174 62.1
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 2.0e-63 246.1 176 64.2
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 2.0e-63 246.1 175 64.6
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 2.6e-63 245.7 176 61.9
Cpa.g.sc17.88 Carica papaya HOM05D004072 ORTHO05D005933 5.8e-63 244.6 179 62.6
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 5.8e-63 244.6 176 64.8
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 1.3e-62 243.4 175 64.0
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 1.7e-62 243.0 176 64.8
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 3.8e-62 241.9 175 65.1
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 3.8e-62 241.9 176 64.2
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 6.5e-62 241.1 176 64.2
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 1.1e-61 240.4 176 63.1
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 1.4e-61 240.0 176 63.6
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 1.9e-61 239.6 176 63.6
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 1.9e-61 239.6 176 64.2
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 1.9e-61 239.6 175 63.4
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 2.5e-61 239.2 175 64.6
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 3.2e-61 238.8 176 61.9
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 5.5e-61 238.0 175 61.7
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 5.5e-61 238.0 175 61.7
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 7.1e-61 237.7 176 63.6
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 1.6e-60 236.5 176 61.9
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 1.6e-60 236.5 176 63.1
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 1.6e-60 236.5 176 60.2
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 2.1e-60 236.1 175 61.1
EL10Ac9g22637 Beta vulgaris HOM05D004072 ORTHO05D005933 2.7e-60 235.7 176 61.4
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 3.5e-60 235.3 176 60.2
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 3.5e-60 235.3 177 63.3
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 6.0e-60 234.6 195 59.0
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 6.0e-60 234.6 177 63.3
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 1.0e-59 233.8 176 61.4
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 1.1e-56 223.8 176 59.7
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 1.2e-55 220.3 176 58.0
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 3.4e-55 218.8 175 58.9
CDE02G3068 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 2.2e-54 216.1 176 56.8
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 5.1e-51 204.9 175 56.0
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 8.7e-51 204.1 175 56.0
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 9.7e-50 200.7 189 51.9
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 1.6e-49 199.9 176 56.2
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 1.6e-49 199.9 174 52.3
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 2.2e-49 199.5 171 53.8
HPP92_001000 Vanilla planifolia HOM05D004072 ORTHO05D005933 9.0e-48 194.1 177 49.7
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 2.7e-44 182.6 174 48.9
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 3.0e-43 179.1 175 48.0
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 4.3e-42 175.3 174 47.7
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 4.3e-42 175.3 177 47.5
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 5.7e-42 174.9 175 48.6
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 7.4e-42 174.5 175 48.6
CBR_g58028 Chara braunii HOM05D004072 ORTHO05D005933 6.5e-30 134.8 176 36.4
HanXRQChr09g0247891 Helianthus annuus HOM05D004072 ORTHO05D005933 1.2e-18 97.4 68 66.2
Lsat_1_v5_gn_1_88400 Lactuca sativa HOM05D004072 ORTHO05D005933 5.9e-15 85.1 63 57.1
Medtr8g464200 Medicago truncatula HOM05D004072 ORTHO05D005933 3.8e-14 82.4 168 30.4
MELO3C003358.2 Cucumis melo HOM05D004072 ORTHO05D005933 2.7e-12 76.3 59 61.0
Rhsim07G0133800 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.0e-11 74.3 66 48.5
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 1.4e-11 73.9 151 29.8
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 2.3e-11 73.2 162 29.6
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 4.0e-11 72.4 162 29.0
CBR_g34929 Chara braunii HOM05D004072 ORTHO05D005933 5.7e-10 68.6 75 41.3
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 5.9e-07 58.5 124 32.3
CSS0044654 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.0e-06 57.8 171 24.6
Lj1A1163T37 Lonicera japonica HOM05D004072 ORTHO05D019491 2.3e-06 56.6 97 39.2
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 8.6e-06 54.7 128 29.7


User provided reference genes

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